Ovis aries (sheep): 101111801
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Entry
101111801 CDS
T03117
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
oas
Ovis aries (sheep)
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oas03021
]
101111801 (CHD1)
03036 Chromosome and associated proteins [BR:
oas03036
]
101111801 (CHD1)
Transcription machinery [BR:
oas03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
101111801 (CHD1)
Chromosome and associated proteins [BR:
oas03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
101111801 (CHD1)
SLIK complex
101111801 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
101111801
NCBI-ProteinID:
XP_027826330
LinkDB
All DBs
Position
5:complement(95667072..95739981)
Genome browser
AA seq
1798 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDNSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQRQASSNSGSE
EDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDYE
PKNKVKSRKPQNRSKSKNGKKIIGQKKRQIDSSEEEEEDEEEYDNDKRSSRRQATVNVSY
KEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGD
PNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRW
LKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECS
WEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL
TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH
LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNK
EELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEAGPLTVGDELLSQFKVA
NFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISF
NGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFG
GPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSLGTERTGGRLGKVKGPTF
RISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEA
QRLSGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPNK
KIKTERDSEEKTEPDVCIKKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRE
NKVKEAIQKEKDIKEEKLSESKSESKERPKKSSLLDAPVHITASGEPVPIAEESEELDQK
TFSICKERMRPVKAALKQLDRPERGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIK
QWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSSLNTQVIRNPDVERLKE
NTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYK
QDSRYYNDREKHRKLDDHRSRDHRSNLEGSLKDRTHSDHRSHSDHRLHSDHRSSSEYAHH
KSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttccggctctggatctggttcgagttctggaagcagtagt
gacggaagcagtagccagtcaggtagcagcgactcagactctggatccgaatcgggcagt
cagtcggagtcggagtcagacaattcccgagaaaataaagttcaagcaaaaccaccgaaa
gttgatggagctgagttctggaaatctagccctagtattttggccgttcagagatctgca
atgcttaagaagcagcagcagcagcagcaacgtcaagcttcatctaatagtggatcagag
gaggattcctctagcagtgaagattccgatgactcatccagtgaggtcaaaaggaaaaag
cataaagatgaagattggcagatgtctggatcggggtcaccctctcagtctggttcggat
tcggaatctgaagaagaaagagataaaagcagttgtgatgaaacagaatcagattatgag
ccaaaaaataaagttaaaagtagaaaacctcaaaatcgatctaagtcaaaaaatggaaaa
aagattattggacaaaaaaagagacagattgattcatctgaggaggaggaggaggatgaa
gaagaatatgataatgataaaagaagctctcgtcgccaagcaactgtcaatgttagctat
aaggaagatgaagaaatgaaaacagattctgatgacctcctggaagtctgtggagaggat
gttcctcaacctgaggaagaggaatttgaaacaatagaacggtttatggattgtcggatt
ggaagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgac
ccaaatgcaggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatgg
aaaggatggtcacatatccacaatacttgggagacagaggaaacccttaagcagcaaaat
gttagaggaatgaaaaaattagataattataagaaaaaagatcaggaaacaaaaagatgg
ttgaaaaatgcttctccagaagatgtggaatattataattgccagcaagaacttacagat
gatctccataagcagtatcaaatagtggaacgaataattgctcattccaatcagaagtca
gctgctggctatcctgattattattgcaaatggcagggtcttccatactcagagtgcagc
tgggaagatggcgctcttatttccaaaaagtttcaagcgtgcatagatgagtatttcagc
aggaatcaatcaaaaaccactccttttaaagactgcaaagtattaaaacaaaggccaaga
tttgtagccctaaagaagcagccatcctatattggaggacatgaaggattagaattaaga
gattatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggtaatagttgc
atacttgctgatgaaatgggcctcggaaaaacaatacagacgatctcatttctgaactat
ttgtttcatgaacaccaattatatggaccttttctgttagtagtaccactctccactctc
acttcctggcaaagggagattcagacgtgggcttctcagatgaatgctgtggtttattta
ggtgacatcaacagcagaaacatgataagaactcatgaatggatgcatccccagaccaaa
cggttaaaatttaatatactgttaacaacttatgaaatcttgctgaaggataaggcattc
cttggaggtctgaattgggcatttataggtgtggacgaagcacatcgattaaagaatgat
gactctcttctgtataaaactttaatagattttaagtccaatcaccgtctccttatcact
ggaactcctctgcaaaactccctcaaagagctctggtctttgctacatttcattatgcca
gaaaagttttcttcctgggaagattttgaagaagaacatggcaaaggcagagaatatggt
tatgcaagcctccacaaagagcttgagccatttctgttgcggagggttaagaaagatgtg
gaaaaatctcttcctgccaaggttgaacagattttaagaatggaaatgagtgctttacag
aaacaatattacaagtggatattaactaggaattacaaagccctcagcaaaggttccaag
ggcagtacctcaggctttttgaatattatgatggagctaaagaaatgttgtaaccattgc
tacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacac
ttaatccgtagtagcggaaaactaattcttcttgacaaactgttaattcgcctaagagag
cgaggcaatagagttcttattttttctcaaatggtgcggatgttagatatacttgcagaa
tatttgaagtatcgtcagttcccctttcaaagattagatggatcaatcaaaggggagctg
aggaaacaagctctagatcattttaatgctgaaggatcagaggatttctgctttttgctt
tccacaagagctggaggtttaggaattaacttagcctcagctgacactgttgttatattt
gattctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattggg
caaaagaaacaggtgaatatttatcgtctggttacaaagggatcagttgaagaggatatt
cttgaaagggccaaaaagaagatggttttagatcatcttgtgattcaaagaatggacaca
actgggaagacagtactacacacaggttctgccccttcaagttctactcctttcaataaa
gaagagttatcagccattttaaagtttggtgctgaggaactttttaaggagcctgaagga
gaagaacaagagccccaggaaatggatatagatgaaatcttaaagagggctgaaactcat
gaaaacgaagcaggacctttaactgtaggagatgaattactttctcagttcaaggttgcc
aacttttcaaatatggatgaggatgatattgagttggagcctgaaagaaattcaaagaac
tgggaagaaatcattcctgaagatcaaagacgacgattagaagaagaggaaagacaaaag
gaacttgaagaaatttatatgctccccagaatgagaaactgtgcaaaacagattagtttc
aatggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagtgattca
atatcagaaagaaaaaggccaaagaaacgtggaagaccacgaactatccctcgggaaaat
attaaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggt
ggccctctggaaagattagatgcaattgctcgagatgctgaattagttgataagtcagag
acagacctcagacgactaggagaattggtacataatggttgcattaaagctttaaaggac
aactctttaggaacagaacgaacaggtggtagacttggaaaagtaaagggcccaacattc
cgaatatcaggtgtacaggtgaatgccaagctggttatctcccatgaagaagaattaata
ccgctgcacaaatccattccttcagatccagaagaaagaaagcagtatatcatcccatgc
cacacgaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgtta
attggtatctacgaatatggatatggaagctgggaaatgattaaaatggatcctgacctc
agtctgacacacaagattcttccagatgatcctgataaaaaaccacaagcaaaacaatta
cagacacgtgcagactacctcatcaaattacttagtagagatcttgcaaaaaaagaagct
cagaggctttctggtgcaggaggttcaaaaaggcgaaaagcaagagctaagaagaataaa
gcaatgaagtctataaaagtgaaagaggaaataaagagtgattcttctcccttgccctca
gagaagtctgatgaagatgatgataaggatgaaatcacttctgtgaaacatccaaacaaa
aaaattaaaacagaaagagacagtgaagaaaaaactgagccagatgtttgtataaagaag
gaaccagaagaaaagagggaagcaaaagaaaaggaaaataaaagagaacttaaaagggag
ataaaagaaaaagaggataagaaagatataaaggaaaaagattttaaagagaaaagagaa
aacaaagtaaaagaagctatacagaaagaaaaagacataaaagaagaaaagctgagtgaa
tccaagtctgaaagcaaggaaagacctaagaaatcttccttgttggatgctccagttcac
atcactgcaagtggtgaaccagtgcccatagcggaagaatctgaagagctggatcagaag
acattcagcatttgtaaagagaggatgaggcctgtcaaagcagcattgaagcagcttgat
aggcctgagagaggcctttcggaaagagaacaactggaacatactagacagtgcttgata
aaaatcggagaccatatcacagaatgtctgaaagagtatacaaatcctgaacaaatcaag
cagtggagaaaaaacctgtggatttttgtatctaagtttactgagttcgatgcaagaaaa
ttacataaattatataagcatgctattaaaaaacggcaggaatcccagcaaaataatgac
cagaacagcagcttgaatacacaagtgattagaaatccagatgtggaaagattaaaagag
aatacaaatcatgatgacagcagcagggacagttattcatctgacagacacttatctcaa
tatcatgatcatcataaagaccgacatcagggagattcgtacaagaagagtgactctagg
aagagaccttattcttcttttagtaatggtaaagatcatcgtgattgggatcactacaag
caagacagcagatattacaatgatagagagaaacacagaaaactggatgatcacaggagt
agagaccacagatcaaatctggaaggaagtttaaaagacagaactcattctgatcatcgt
tctcattcagatcatcggttacattcagaccatcgatcaagttctgaatatgcacaccat
aaatcttccagggattataggtatcactcagattggcagatggaccatagagcttccagt
agtggtcccagatctccactagaccagaggtctccttatggctccagatctccatttgaa
cactcaattgaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
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integrated database retrieval system
