Ovis aries (sheep): 101111844
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Entry
101111844 CDS
T03117
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X2
KO
K14792
rRNA biogenesis protein RRP5
Organism
oas
Ovis aries (sheep)
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oas03009
]
101111844 (PDCD11)
Ribosome biogenesis [BR:
oas03009
]
Eukaryotic type
90S particles
Other 90S particles
101111844 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_PRP39_N
HAT_PRP39_C
OB_RRP5
HAT_Syf1_CNRKL1_N
Suf
HAT_Syf1_CNRKL1_C
OB_RRP5_4th
TPR_14
TPR_19
ARM_TT21
TPR_CcmH_CycH
TPR_16
TPR_12
ARM_TT21_5th
UTP6_C
TPR_15
DUF7017
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
101111844
NCBI-ProteinID:
XP_004020210
LinkDB
All DBs
Position
22:23678553..23721184
Genome browser
AA seq
1873 aa
AA seq
DB search
MAAMEESFPRGGTRKTHKSEKAFQQSVEQDNLFDISTEEESTKRKKTQKGPAKTKKVKVE
TRESSKFVREKFEILNVESLCEGMRILGCVKEVNELELVISLPNGLQGCVQVTEICDAYT
EKLNEQVAQEEPLQDLVGLPELFSPGMLVRCVVSSLDTTKWGKKNVMLSLNPKNVNRVLS
AETLKPGMLLTGAVSSLEDHGYLVDIGVSGARAFLPLQKAQEYIRQKNKGARLKVGQYLN
CLIEEVKGSGGVVTLSIGHSEVSAAIATEEQSWTLNSLLPGLVVKAQVQKVTPLGLTLKF
LSFFSGLVDFMHLDPKRAGTYFSNQQVRACVLCVHPRTRAVRLSLRPIFLQPGRPLTRLL
CQQLGAVLDDVPVQGFFGNAGATFKLKDGALAYARRNHLSNSKKTFKPEAFKPGNTHKCR
IIDYSQMDELALLSLRTSIIEAQFLWYHDIKPGALVKGKVLTIKPHGMVVKMGKQIRGLV
PTMHLADILIKNPEKKYHVGDEVKCRVLLCDPKAKKLMMTLKKTLVESKLPAITCYDDAK
PGLQTHGFILRVKEYGCIVKFYNDVQGLVPRHELSAEYVPDPESVFYTGQVVKVAVLNCE
PSKERMLLSFRLLSDPKQECEGQSQKKKKAVSAGQLVDVKILEKTKDGLKVAVLPHNIPG
FLPTAHLSDHVTNGPLLYHWLQTGDTLHRVLCLSASEERVLLCRKPALVSAVEGGQNPKS
FSEIHPGMLLIGFVKNIKDYGVFIQFPSGLSGLAPKAILSDKFVTSTSDHFVEGQTVVAK
VTNVDKEKQRMLLSLRLSDCTLGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAE
MTPGMALDLEVQEVLEDGSVLFSEGPVPGLVLRASKYHRAGQELEPGQKKKAVILNVDML
KLEVHVSLCHDLVNRKAKKLKKGSDLQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDT
FRFDSEKLQVGQGVSLTLQTTEPGVTGLLLAVEGPAAKRTMRQARKDSETVDEDEEVDPA
LVIGTVKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPVGTSPTAKL
KVGKKVTARVIGGRDMKTFKFLPISHPRFIRTIPELSVRPSELKEDGHTALNTHSVSPLE
KIKQYQAGQTVTCFLKKYNMVKKWLEVEIAPDVRGRIPLLLTSLSFKVLKHPDKKFQIGQ
ALKATVVGPADSSKAFLSLSLIGPHKLKKGEVAMGRVVKVTPKEGLTVSFPFGRVGRVSM
FHVSDSYSETRLEDFAPQQIVRCYVLSAASPVLTLSLRSSRTNPETKSKITDPEINSIKD
LEEGQLLRGFVKSVQPSGVLVGLGPSVTGLAQHPHVSQHNQSKNAPYDRHLPEGKLLTAK
VLRLNHQESLVELSLLPDATGKQDARSAPLRQPPPKQEGRETEAVERNHEGKAKEKQQQK
QKEKRTGKGQDGAQPPSKDKKEPQKPQAKKLGKRPHPESGSEQEIGSKKQKKAVLSEEDD
SGVEVYYREGEEEAEEMSMLPKEKLTRPAEAPRLQLSSSFVWDVGLDTLTPALPPHRESS
DSEEDEKPEQATKKKSKKERELEKQKAEKELSRLEEALMDPGRQPESAEDFDRLVLSSPS
SSLLWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESL
TKVFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLLR
RGKAEACHHVMQRALECLPKKEHVDVIAKFAQLEFQLGDAERARAIFESTLSIYPKRTDV
WSVYIDMIIKHGSQKEARDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGSEKDVQAVKAK
ALEYVEAKSAVVD
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatggaagaaagcttcccccgtgggggtacaagaaagacccacaaatcagag
aaagctttccagcaatcagttgaacaagacaacttatttgatatttctactgaagaggaa
tctaccaaaaggaaaaagacccagaaagggccagcaaaaacaaaaaaagtgaaagttgaa
accagagaaagcagcaagtttgtcagagagaagtttgaaatccttaatgtggagtccctg
tgtgaggggatgcggattttgggttgcgtgaaagaggtaaatgaactggaactggtgatt
agtctccccaacggcctccaaggatgtgtgcaagtgactgaaatctgtgatgcttacact
gaaaagctgaatgagcaggtggcccaagaagagcccctgcaggacctggtcggcttgcct
gagctcttctcacctggaatgctggtgagatgtgtggtgagcagcctggataccacaaag
tggggcaaaaagaatgtcatgctttctctgaaccccaaaaatgtcaacagagtgctgagt
gctgagaccctgaaacctggcatgctgctcacaggcgctgtgtccagcctggaagaccat
ggctacctagtggacattggtgttagtggggccagagcttttctgccactgcagaaagcc
caggagtacattcggcagaagaacaaaggtgctagactgaaggtgggtcagtacctgaac
tgcctcattgaggaggtgaagggcagtggaggagttgtcactctgtctattggtcactcg
gaagtttctgctgccattgctactgaggagcagagttggaccctcaatagtttgctacca
ggactggtggtcaaagcgcaggtacagaaggtgactccacttggccttacacttaaattc
ctctcgttcttcagtggcctggttgacttcatgcacctggatcctaagcgagccggaaca
tatttctcaaatcagcaagtacgggcctgtgtcctctgcgtgcatcctcggaccagagct
gtgcggctgagcctgcgccccatcttcctgcagcccgggcgcccactcacccggcttttg
tgccagcagctaggagctgtgctggatgacgtgcctgtccagggcttttttggcaatgct
ggggccacctttaagctgaaggatggtgctctggcctatgctcggcgcaaccatctctcc
aattctaagaaaactttcaaacctgaggccttcaagccagggaacactcacaagtgtaga
atcatcgactacagccaaatggatgagctggccttgctctctctgcggacgtctattatt
gaagctcagttcctttggtatcatgacatcaaacctggggctttggttaagggcaaagtg
ctgaccataaagccacacggaatggtggtgaagatgggcaagcagatcaggggcctggta
cctaccatgcacctggccgacatccttataaagaatccggagaagaaataccacgttggg
gatgaggtcaagtgccgggttttgctttgtgaccctaaagccaagaagctcatgatgacc
ctgaagaaaaccctggttgagtccaaacttcctgccatcacctgctatgatgatgccaag
cctggtctgcagacacatggctttatcctccgggtcaaggaatacggctgcatcgtgaag
ttctacaatgacgtgcagggactggtgcccaggcacgagctcagtgccgagtacgtccct
gacccagagagtgtcttttacacgggccaggtggtgaaggtcgcggtgctgaactgtgag
ccgtccaaggagaggatgctgttatccttcaggctgttgagtgatccgaagcaagagtgt
gaaggacagagtcagaagaaaaagaaagccgttagtgctgggcagttggtggatgtgaag
attttagagaagaccaaagatgggctgaaggtggctgtcctgcctcacaacatccccggc
ttcctccccacggctcatctgtcagaccacgtcaccaatggcccactgttgtatcactgg
ctccagacaggtgacaccctgcaccgggtcctgtgtctgagcgccagtgaggagcgggtt
ctgctttgcaggaagccagccttggtctccgcagtagagggtggccagaatcccaagagc
ttctcagaaatccatcccggaatgctgcttattggttttgtgaagaacatcaaggactat
ggtgtgttcatccagttcccctcaggtcttagtggactggcccccaaagctatcttgagt
gacaagtttgtgacctccacaagtgaccactttgtcgaggggcagacggtggttgcgaag
gtgaccaacgtggacaaggagaagcagcggatgctgctgtcgctgcggctgtcggactgc
accctgggggacctagccacaaccagcctcctcctcctgagccagtgcctggaggagcgg
cagggcgtccggagcctcatgagcaaccgagactctgtgttgatccagactttggctgag
atgaccccggggatggcccttgacctggaggtgcaggaggtgttggaagacggttctgtg
ctgttcagtgagggccctgtgcctggcttggtcctgagagccagcaagtatcatcgggca
gggcaggagctggaacctgggcagaaaaagaaggctgtaatcttaaacgttgatatgttg
aagttggaagtacatgtttccctctgccacgatttggtgaatagaaaagctaaaaagctg
aagaaaggtagtgacctccaggccattgtgcagcacttggaggagtcctttgccgtcgcc
tccttggtagaaactggccacctcgcagctttctccctgacctctcacctgaacgacacc
ttccgctttgactcagagaaattgcaggtggggcaaggcgtctccctaaccctccagacc
acagaaccaggagtgaccggtctccttttagctgttgaggggccagctgctaagaggacc
atgagacaggcccggaaggactcagagacagtcgacgaggatgaggaagtggatccagct
ctggtcatagggactgtaaagaagcacaccctgtccattggggacatggtcacggggact
gtcaagtccattaagcctacccatgtggttgtgaccctggaagatggcatcattggctgc
atccatgcctcccacattctagatgatgttccagtgggcacatctcctactgccaagctg
aaagttgggaagaaagtcactgcccgagtgattggcgggagagacatgaagaccttcaag
tttctcccaataagtcatcccagatttattcgaaccatcccagagctgagtgttcggcca
agtgagctgaaggaggatggccatactgctctcaacactcactctgtaagccccttggag
aagattaaacagtatcaggctggtcagactgtgacttgcttcttgaagaagtacaacatg
gttaagaaatggctcgaggtggagattgctccagacgtccgagggagaattcccttgttg
cttacatctcttagcttcaaggttctgaaacatccagataagaagttccagattggccag
gccctgaaggccaccgtggttggcccagcagattcctccaaggccttcttgtctctttca
ctcataggtcctcacaagctcaagaagggggaagtggccatgggccgtgtggtgaaggtg
acgcccaaggaggggctgaccgtctccttccccttcgggagggttggaagagtcagcatg
tttcatgtgagtgactcctactcggagacgcgcctggaagacttcgccccacagcagatt
gtcaggtgttacgtcctgtccgctgcaagccctgtattgactttgtcgctgagatcatcc
aggacgaacccagagacgaaaagcaaaataacagatccagagattaactccatcaaggac
cttgaggaagggcagctcttgaggggcttcgtcaagtccgtccagccatccggcgtgctc
gtaggccttggcccctcagttacgggtttggcccaacacccgcacgtctcccagcacaac
cagtccaagaacgctccttatgacagacacctccctgaggggaagctgctcacagccaag
gtcctacgcctgaaccatcaggagagcctggtagagctgtcactcctccccgatgccact
ggaaagcaggacgcgcgttctgcccccttgagacagccacctccaaagcaagaggggagg
gaaacggaggcagtggagagaaaccacgaaggaaaagcaaaggagaagcagcagcagaaa
cagaaagagaagagaactggcaaggggcaggatggggcgcagccacccagcaaggataag
aaagagccccagaagccccaggcaaagaagctgggcaagcggccgcaccccgagtccggc
agtgagcaggaaatcgggagcaagaagcagaagaaagctgtcctgtctgaggaggacgac
agtggtgtggaagtgtattaccgagaaggagaagaagaggcagaagagatgagcatgttg
cccaaggagaagctgaccaggcccgcagaagcgccccggctgcagctatcttccagcttc
gtttgggacgtgggtctggacaccctgaccccagccttgccacctcacagagagagctcg
gacagtgaggaggacgagaagccagagcaagccacgaagaagaaaagcaagaaggagagg
gagctggagaagcagaaggcggagaaggagctgtcccgcctcgaggaggcgctgatggat
cctgggcgacagccggagtcggccgaggacttcgaccgactggtgctgagctcgcccagc
agctccctcctgtggctgcagtacatggccttccacctgcaggccacggagatcgagaag
gcccgggccgtggctgagagggcgctcaagaccatctccttcagagaggagcaggagaag
ctgaacgtgtgggtggccctgctgaacctagaaaacatgtatggctcccaggagtcgctg
accaaggtcttcgagcgggctgtgcagtacaatgagcctctcaaggtctttctccacctg
gctgacatttacaccaagtcagagaaattccaggaagctggcgaactctacaaccggatg
ctgaagcgtttcaggcaggagaaagctgtctgggtcaaatacggcgccttccttctgcgg
aggggaaaggcggaggcctgccaccatgtgatgcagcgagcccttgagtgcctgcctaag
aaagagcacgtggatgtgattgccaagtttgcgcagcttgagttccagctaggggatgca
gaacgcgccagagccatttttgagagcacactgagcatctacccaaagcgcacggatgtc
tggtcggtttacatcgacatgatcatcaagcacggcagccagaaggaagcccgggacatc
ttcgagcgggtcattcacctgagcctggcccccaagcgaatgaaattcttcttcaagcgc
tacctggactacgagaagcagcacggctcggagaaggacgtgcaggctgtcaaggcgaag
gccctggagtacgtggaggctaagagcgccgtggtggactag
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