KEGG   Ovis aries (sheep): 101112230
Entry
101112230         CDS       T03117                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
oas  Ovis aries (sheep)
Pathway
oas03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oas00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101112230 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oas03041]
    101112230 (CDC40)
Spliceosome [BR:oas03041]
 Complex C
  Other components
   Step II factors
    101112230 (CDC40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 WDR54 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 101112230
NCBI-ProteinID: XP_004011257
UniProt: A0A6P3EGT5
LinkDB
Position
8:complement(27288316..27334522)
AA seq 579 aa
MSAAIAALAASYGSGSGSESDSDSEGGRCSLPAADSLMHLTKSSSDKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtcggctgcgattgcagctctcgctgcttcttatggttcgggttcagggtccgaatcg
gactcggacagtgagggcgggcggtgttccttgccagccgcggattccctcatgcactta
actaaatcgtcttcggataagccctctctggcagtggcagtggactccgctccggaggtg
gcagttaaggaagatttggagactggagttcaccttgaccctgctgtcaaagaggttcag
tataatcccacctatgagaccatgtttgctcctgagtttggaccagaaaatcccttcaga
acccagcaaatggctgcccctagaaatatgctttctggatatgctgaaccagcccatatc
aatgattttatgtttgaacagcaaagaagaacttttgccacttatggttatgcattggac
ccttcattagataatcatcaagtgtctactaagtatattggttctgtagaagaagctgaa
aaaaaccaaggtttaactgtgtttgaaactggtcagaagaaaatagaaaagaggaaaaaa
tttaaagaaaatgatgcatctaatattgatggtttcttgggaccctgggcaaaatatgta
gacgaaaaagacgtagccaaaccttcagaagaagaacaaaaagaattggatgaaattaca
gcaaagaggcagaagaaaggcaaacaggaagaagagaaacctggagaggaaaagacaatc
ttacatgttaaagaaatgtatgactatcaaggcaggtcctatcttcacatacctcaggat
gtcggtgttaatctgcggtcaactgtgccacctgagaaatgttatcttcccaaaaaacaa
attcatgtgtggtctggacacacaaagggcgtcagtgcagtcagattgtttcctctctct
ggccatttgttgctgtcttgttccatggactgtaaaattaagctatgggaggtttatgga
gacaggcgctgtctgcgaacatttattggtcacagtaaagctgttagggacatctgcttt
aatactgcaggaacacagttcctcagtgcagcttatgacaggtatcttaagctctgggac
actgagacaggacagtgtatatcaagatttacaaaccgaaaagtaccttattgtgtcaaa
tttaatcctgatgaagataagcaaaatctctttgtggctgggatgtctgataagaagatt
gtgcaatgggacattcgaagtggagaaattgtgcaggaatatgatcggcatttgggagct
gtcaacaccattgtttttgtcgatgagaataggagatttgtaagcacatccgatgataag
agcctaagagtttgggaatgggatatccctgtggatttcaagtatatagcagaacccagt
atgcactcaatgcctgcagtgactttgtctccaaatgggaaatggctagcgtgccaatca
atggacaaccaaatcttaatttttggagcacagaacagatttagattgaataagaagaaa
atttttaagggccatatggtagcaggctatgcttgtcaagtagacttttcaccagacatg
agctatgtgatttcaggagatggaaatggaaagttaaacatctgggactggaagaccaca
aaactctacagtagatttaaagctcacgataaagtgtgtataggtgcagtgtggcatcct
catgaaacatctaaagtcataacttgtggttgggatggtctcattaaactgtgggattaa

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