Ovis aries (sheep): 101112673
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Entry
101112673 CDS
T03117
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X7
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
oas
Ovis aries (sheep)
Pathway
oas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101112673 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
101112673 (PATL1)
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101112673 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
101112673 (PATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
101112673
NCBI-ProteinID:
XP_014956669
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Position
15:complement(81407290..81434733)
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AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKP
PAAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLEPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERVSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPPQQHPPGPGPHLQNLRSQTPVFRPDTTHLHP
QHRRLLHQRQQQNRNQHRTLNGAGDRGSHRSSHQDHIRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVHGDGPRKERTKLITPQVARLEHTYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLFIIEKTYSLLLDVEDY
ERRYLLSLEEERPALMDERKHKICCMYDNLRGKLPGQESPSDDHFVQIMCIRKGKRMVAR
VLPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPPVTVTSLLQQL
MNLPQSAAAPAPSNPHLSAVLQNKFGLSLLLLVLSRGEDLQSSDTASESAQSNPWTEVMF
VATRELLRIPQTGLAKPVSIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggcctgggagaggaggatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagctcatgagcgcctggctgaactggaagagaagcct
cctgcagcagttaatgaacaaaccggcaatggagaacgggatgagatggacttgttgggt
gaccatgaggagaatctggcagagaggctcagtaagatggtgattgaaaatgaacttgaa
gacccagctatcatgagggcggtacagaccaggccagtgttggaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtgttagaatatgccttgcctcagaggcccccccag
ggcccagaagacgatcgggacctttccgagcgcgcattaccaaggcggtccacctcgcct
gtcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtgcccagcttcaaccagcagatcctgtgtccaaagcctgtgcatgttcggcccccgatg
ccgccgcggtatcctgctccctatggtgagagggtgtctccaaaccagctctgcagtgtc
ccgaactcctccctgctgggccacccttttccccctagcgtccctcctgtcctcagcccc
ctccagagagcacagcttcttggaggagcgcagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggattcgtgggcagcccacttgccgccatgaatcccaagctg
ttgcaagggcgagttgggcagatgctcccccctgcgccaggcttccgcgccttcttcagt
gccccaccccctgctacaccaccacctccacagcagcacccccctggcccaggaccccac
ctgcagaatctaagatcgcagaccccagtgtttagaccagacacaacccatcttcatcca
cagcaccgtcgactcttgcatcagaggcagcaacagaatagaaatcagcatcggactctc
aacggtgcaggagacagagggagtcaccggagcagtcatcaggatcatatccggaaggac
ccgtatgctaacctcatgctgcagcgagagaaagactgggtctctaagattcagatgatg
cagctgcagagcactgacccctacctggacgacttctactaccagaattactttgaaaaa
ctggagaagctgtcagctgctgaagaagtgcacggtgacggcccaagaaaggaacgcacc
aagctcatcacgccccaggtggccaggctggagcacacctacaagccagtgcagtttgag
ggctctttgggaaagctcactgtctctagtgtgaataatccccgaaaaatgattgatgct
gttgtgacgtctcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaaaaga
cgaaaaacccttttcataattgagaaaacctacagtttactgcttgatgtggaggattac
gaaaggcgttacctcctaagtctggaagaagagcgacctgccctgatggatgaaagaaag
cacaaaatttgttgcatgtacgacaacttaagggggaaattgcctggacaggagagcccg
agtgacgaccactttgtgcagatcatgtgcatccgaaaggggaagaggatggtggcccgg
gtcctgcctttcctctccacagagcaagcagcggacattctcatgacaacagccaggaac
ctgcctttcctcatcaagaaggatgcgcaggatgaggtgctgccgtgcctattgagtccc
ttctctctcctcctctaccatcttccaccagtgaccgtcaccagccttctgcagcagctg
atgaacctacctcagagtgcagcggccccagctccgtccaacccgcacctctctgccgtg
ctccagaacaagtttggcctgtccctgctcctcctcgtcctgagccgcggggaagaccta
cagagctcagacaccgcttcagaatcggcgcaaagcaacccgtggacggaggtgatgttc
gtggcaacccgagaacttttgcggattccccagacgggcctggccaagccagtctctata
cccacaaacctagtatccctcttctctcgctacgttgaccgacagaaactgaacttgctg
gagacaaagctgcagctagttcaggggatacggtaa
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