Ovis aries (sheep): 101112807
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Entry
101112807 CDS
T03117
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
oas
Ovis aries (sheep)
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oas04131
]
101112807 (VPS50)
Membrane trafficking [BR:
oas04131
]
Protein recycling
Others
EARP complex
101112807 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
101112807
NCBI-ProteinID:
XP_004007766
UniProt:
A0A6P3E4G8
W5NPU5
LinkDB
All DBs
Position
4:11377951..11515698
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AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWGVMLSYYRTMEWHEKHDSEDAASASEG
SNMMGAEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQSSATSSKTVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDFVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADSAATLTAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDTLLKEFEQFNMRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLSAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgacccggcagggtctgaaaagtcctccagagagcctc
agtgatcttggtgccattgagagtctccgggtccctggaaaggaggaattccgagaactc
cgagaacaacctagtgaccctcaagctgaacaagaactaattaatagcattgaacaagtg
tatttttctacagattcatttgatattgttaaatatgaactggagaagctccctcctgtt
ctcaatttgcaagaattagaggagtacagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtcaaggaacttgaa
agagttacttcattacaaacaggtcttcagttagctgctgttatctgcaccaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggcctccttgcaaat
cagaggaaacgtcagttgctgattggacttctgaaatctctgagaacgataaaaacattg
caaagaacagatgtccgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagctgtgcctagaatgtcagaaagctgccagcacttttaaacattacagttgcataagt
gaactgaattcaaagttgcaagatactttagaacaaattgaggaacagttggatgttgct
ctgtccaaaatatgcaagaattttgacattaaccactacaccaaagttcaacaagcttat
cgacttcttggaaaaacacagaccgcaatggatcaacttcatatgcacttcacccaagcc
attcataacaccgtgtttcaagttgttcttggctatgtggaactgtgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacgcatgttacaccagacagc
tacattccatgccttgctgacctgtgcaaagcactgtggggagtgatgctcagctattac
aggactatggaatggcatgagaagcacgacagtgaggatgctgcttctgcttctgaaggg
agcaatatgatgggtgccgaagagacaaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagttaaaacctacttgctc
ggaactgatttgtctatattcaaatatgatgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatct
attagaaaacaaagtgtcaattattttaagaactaccatagaacaaggcttgatgaactg
agaatgtttctagagaatgagacctgggaactttgtcctgtgaagtcaaatttcagcatc
ttgcagcttcatgaatttaaattcatggaacagtctcgttctccatcagtttcacccagt
aagcagtcatctgcaacttcctcaaaaacagtaaccttgtttgagcagtactgcagtggt
gggaatccatttgaaattcaggccgaccacaaagatgaagaaacagaagatgtcttggct
tctaatgggtatgaatctgatgaacaagaaaaaagtgcctaccaggaatatgacagtgac
agtgatgttcctgaggaactaaaacgagattttgttgatgagcagacaggcgatgctcct
gtgaaaagtgtttctcgagagaccctaaaaagcaggaagaaatcagactacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacattgaatgtaataaggcttgttggtaaa
tatatgcagatgatgaacattcttaagccaattgcatttgatgttatccattttatgtct
cagctctttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatcaacaggactaggtcttagtagtagtcggctaagaacaactctaaacaggatacaa
gaaagcctcattgatctggaggtttcggctgattccgctgccacactcacagcagcagaa
gagaggaaggagaaggtgccgagtcctcacctgagtcacctagtggtgttgacctctggg
gacacactgtatgggttggcggaaagagtggtcgccacagaatccttggtattcttggct
gagcagtttgagttccttcagcctcatctggatgctgtgatgcctgcagtcaaaaaacca
tttcttcagcagttttattctcagacggtctcaacggccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctgctaatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatacactgttg
aaggaatttgagcagtttaacatgcggttaaatgaggtttctaagagagttcggataccc
ttgcccgtgtctaatatactttgggaacattgtatacgcctggctaatagaactattgtg
gaaggatacgccaacgtcaagaagtgtagcaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaagctaactgatatcagacccattccggataaa
gaatttgtggaaacctatattaaagcatactacctaaccgagaatgacatggaacgctgg
atcaaagagcacagggagtattcaacgaagcagctgaccaacctggtaaatgtttgcctg
ggatcccatatcaataagaaagcaaggcaaaaacttctctcagctatagatgatatagac
agacccaaaagataa
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