Ovis aries (sheep): 101114145
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Entry
101114145 CDS
T03117
Name
(RefSeq) superkiller complex protein 2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
oas
Ovis aries (sheep)
Pathway
oas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101114145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
101114145
Enzymes [BR:
oas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101114145
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101114145
mRNA degradation factors
3'-5' decay
Ski complex
101114145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
Ski2_N
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
HAS-barrel
DUF3516
Motif
Other DBs
NCBI-GeneID:
101114145
NCBI-ProteinID:
XP_042093034
LinkDB
All DBs
Position
20:complement(26471037..26481056)
Genome browser
AA seq
1246 aa
AA seq
DB search
MMETERLVLPPPDPLDLPLRAVELGCTGRWELLNVPGAPESTLPHGLPPCAPDLQQEAEQ
LFLSSPTWLPLHGVEHSARKWQRKMDPWSLLATLGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSSTTSLSLRRPPAPISQSLWGNPTQYPFWPGGMDEPTITDLSTREEAEEEIDFE
KDLLTVPPGFKKGVDFAPKDHPAPAAGLLSLSCLLEPLDLGGGDEDESEAVGQPGGPRQD
TVSASSGSVPLARASSLEDLVLKEAATAVAPPEPPKPPPQEQWAVPVDVTSPVGDFYRLI
PQPAFKWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VARPVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKKLGALEEPEVTGQLIDLPEYYSWGEELTETRSQIQHRIIESVNGLKSLS
AGRVVVVKNQEHHNALGVILQVSSNSTSRVFTALVLCDKPVSEDPRERGPASPDVPYPDD
LVGFKLFLPEGPCDHTVAKLQPGDVAAITTKVLRLNGDKILEDFSKRQQPKFKKDPPSAA
VTTAVQELLRLAQAHPTGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRF
PAQYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV
ACAMSSHELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVRT
VAKRIGEVQAACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacggagcgactcgtgctacctcccccagatcccctggacctgccccttcgg
gccgtagagctgggatgcactgggcgctgggagttgctgaatgtgcctggggctccagag
agcacccttccccacggcctccctccctgtgccccagatctgcagcaggaagcagagcag
ttgttcttgtcatctcccacctggctgcctctgcatggtgtggagcactcagcccggaaa
tggcagaggaagatggatccctggtctctcctggccacactgggggccccagtcccctcc
gacctacaggcccaaagacacccaaccacaggccagatactaggctacaaggaggtcctg
ctagagaatacaaacctgtcgtccacaacctccttgtctcttcgccggccaccagcaccc
atctcccagtccctgtgggggaatccaacccagtaccctttctggccaggtgggatggat
gagcccactataacagatctgagcactcgagaggaggctgaggaggagatagactttgag
aaagacctccttactgttccacctggcttcaagaaaggtgtggacttcgcaccaaaggat
cacccagctccagctgccgggttgctcagcctcagctgtctgctggagcccttggatttg
ggtgggggcgatgaggatgagagtgaggcagtgggacagcctggcggtcccagacaggac
actgtttcagcctcttctggcagtgttcctctggcccgagcaagcagcttggaggaccta
gtgttgaaggaagcggccacagctgtagcccccccagaacctcccaagcccccacctcag
gagcagtgggccgttcctgtggatgttacctcccctgttggtgatttctaccgcctcatt
ccccagccagccttcaagtgggcgtttgagccagatgtgtttcagaaacaggccatcctg
cacttggagcggcacgactccgtctttgtcgcggctcacacatccgcagggaagacggtt
gtggctgaatacgccatcgcgcttgcccagaaacacatgacgcgcaccatctatacctcg
cccatcaaggctctgagcaaccagaagttccgggacttccgaaacacgtttggggacgtg
gggctgctcaccggggacgtgcagctgcacccggaagcctcgtgcctcattatgacaaca
gagatccttcgctccatgctgtacagtggctcggacgtcatccgggacctggagtgggtc
atctttgatgaggttcactatatcaatgacgctgagcgcggggtcgtgtgggaggaggtt
ctcatcatgctgcctgaccacgtgtccatcattcttctgagtgctactgtccccaacgcc
cttgagtttgctgactggatcgggcggctgaagcgtcgccagatctatgtgatcagcacc
gtcgcgcgcccagtgcccctggagcactatctcttcacggggaacagccccaagacccag
ggggagctcttcctgttactggactcccgcggtgccttccacacaaaggggtactatgcg
gctgtggaggccaagaaggagcggatgagcaagcatgcccagacttttggggccaagcaa
cccacgcatcagggagggcctgcccaggaccgtggcgtgtacctgtccctcctggcctcc
ctccgcacccgtgcacagctgccagtggtggtgttcaccttctcccggggccgctgtgac
gagcaggcctcgggcctcacctccctcgacctgacgacgagttcagagaagagtgagatt
cacctcttcctgcagcgctgccttgcccgtctccgcggctctgaccgccagctgccccag
gttctgcacatgtcggagctcttgcaccgcggcctgggtgtgcatcacagcggcatcctg
cccatcctcaaggagattgtggagatgctcttcagccgcggcctggtcaaggtcttgttt
gccacggagaccttcgccatgggtgtaaatatgccggcccggacggtggtatttgactcc
atgcgaaagcacgatggctccaccttccgggacctactccctggggagtatgtgcagatg
gcgggccgggcgggccggaggggcctggaccccacaggcacggtcatcctgctctgcaag
ggccgcgtgcccgagatggcggacctgcaccgcatgatgatggggaagccatctcagctg
cagtcccagttccgcctcacgtacaccatgatcctcaacctgctgcgggtggatgctctc
agggtggaggacatgatgaagaggagcttctcagagtttccatctcgcaaggacagcaag
gcccatgaacaggctctggctgaactgaccaagaagctgggggctttggaagagcccgag
gtgactggccagctcattgacctgcctgagtattacagctggggggaggaactgactgag
acccggagccagatccagcaccgcatcatagagtctgtgaatgggctgaagtctctctca
gcgggaagggtggtggttgtgaagaatcaggagcatcacaacgcactgggtgtgatcctt
caggtctcttcgaactccaccagcagagtattcacagccctggtcttgtgtgacaagccc
gtgtctgaggacccgcgggagagggggccagcctccccagacgtgccctacccagacgac
ctcgtgggattcaagctgttcctgcctgaagggccctgtgaccacactgtggccaagctc
cagccaggagacgtggccgccatcaccaccaaggtgctccggctgaacggggacaagatc
ttggaggacttcagcaagcggcagcaaccaaagttcaagaaggatccgccctctgcggcc
gtgaccactgctgtccaggaactgctacgactggctcaggcgcaccccacgggaccccct
accctggaccctgtcaatgacctgcaactcaaggatgtgtctgtggtcgaggggggcctc
cgggcccggaagctggaggagctgatccggggggctcagtgtgtgcacagtccccgtttc
cctgcccagtacctgaagctgcgggagcggatgcagatccagaaggagatggagcggctg
cgcttcctgctgtcggatcagtcgctgctgctgctccccgagtaccaccagcgagtagag
gtgctccgaaccctggggtacgtggacgaggcgggcacagtgaagctggccgggcgggta
gcttgtgccatgagcagccatgagctgctcctcaccgagctcatgttcgacaatgcactg
agcaccctgcggcctgaggagattgctgccctgctctccggcctggtctgccagagcccc
ggggaccctggcgatcagctccccagcaccctcaaacagggggtggaacgggtccggact
gtggccaagcggattggtgaggtccaggcggcctgtggtttgaaccagaccgtggaggaa
tttgtcggggagctgaattttgggctggttgaggttgtgtacgagtgggcccggggcatg
cccttctctgagttggcagggctctcagggactcctgagggcctggtggtccgctgcatc
caacgcctggccgagatgtgtcgctcacttcggggggcggcccgcctggtgggcgaacct
gtgctaggtgccaagatggagacggcagccaccctgttacgaagggatatcgtctttgct
gccagtctctacacccagtga
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