Ovis aries (sheep): 101116565
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Entry
101116565 CDS
T03117
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oas
Ovis aries (sheep)
Pathway
oas03082
ATP-dependent chromatin remodeling
oas04714
Thermogenesis
oas05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101116565 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101116565 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101116565 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oas03021
]
101116565 (SMARCA4)
03036 Chromosome and associated proteins [BR:
oas03036
]
101116565 (SMARCA4)
Transcription machinery [BR:
oas03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101116565 (SMARCA4)
Chromosome and associated proteins [BR:
oas03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101116565 (SMARCA4)
Chromatin remodeling factors
BAF complex
101116565 (SMARCA4)
PBAF complex
101116565 (SMARCA4)
GBAF(ncBAF) complex
101116565 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
101116565
NCBI-ProteinID:
XP_027825465
LinkDB
All DBs
Position
5:13256839..13346858
Genome browser
AA seq
1639 aa
AA seq
DB search
MSTPDPALGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSIMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYTQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQPQMPALPPPSVSATGPGPSPGPAPPN
YSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPT
GRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQ
EREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDT
ALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKE
YHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK
RLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDE
TSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEE
EEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGL
QSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQ
TIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQL
RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLL
LTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRL
HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKG
KGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRI
LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE
YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN
SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGS
ASFAHTAPPPAGVNPDSEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEA
RNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQW
LKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGPSTPTTSTRSRDKDDESKKQKKRGRPPA
EKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFK
KIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKED
DSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSD
DDSEEEQEEDRSGSGSEED
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaccagacccagccctgggcggaactcctcggccaggcccttctcccggcccg
ggcccctcccctggagccatgttgggccccagcccgggcccctcccctggctccgcccac
agcatcatgggacccagcccagggcctccctcggcaggacaccccatcccgacccagggc
cctggagggtaccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcat
gagaagggcatgtcggatgacccccgctatacccagatgaaggggatggggatgcggtca
gggggccatgcaggcatggggcccccgccaagccccatggaccagcactcccaaggttac
ccctcacccctgggcggctccgagcatgcctccagcccggttccagccagtggcccgtcc
tcgggcccacagatgtcgtctgggcccgggggggccccgctagatggtgctgatccgcag
gctttggggcagcagaaccgaggcccaacacccttcaaccagaaccagctgcaccagctc
agagcacagatcatggcctacaagatgctggcccgggggcagccccttcccgaccacctg
cagatggccgtgcagggcaagcggccgatgcccgggatgcagccacagatgccagctcta
cctccgccctccgtgtctgcaacagggcccgggcccagccctggaccagcacctccaaat
tacagcaggcctcatggtatgggagggcccaacatgccccctccaggaccctcaggcgtg
cctcctgggatgcccggccagccccccggagggcctcccaagccctggcctgaaggaccc
atggcaaatgctgctgcccccacgagcacacctcagaagctgatacccccacagccgaca
ggccgcccatcgcccgcaccccctgctgtcccgcccgctgcctcccctgtgatgccaccc
cagacgcagtcaccggggcagcccgcccagcctgcccccatggtgccgctccaccagaag
cagagccgcatcaccccgatccagaagccgcggggcctggaccccgtggagatcctgcag
gagcgggaatacaggctgcaggctcgcatcgcacaccgaattcaggaacttgaaaacctt
cccgggtccctggccggggatttgcgaaccaaagctaccatcgagctcaaggccctcaga
ctgctgaacttccagaggcagctgcggcaggaggtggtggtgtgcatgaggagggacaca
gccctggagacggccctcaatgccaaggcctataagcgcagcaagcggcagtccctgcgc
gaggcccgcatcaccgagaagctggagaagcagcagaagatcgagcaggagcgcaagcgc
cggcagaagcaccaggaatacctcaacagcattcttcagcatgccaaggatttcaaggaa
tatcacaggtcggtcacaggcaaaatccagaagctcacaaaggcggtggccacgtaccac
gccaacaccgagcgggaacagaagaaggagaatgaaagaatcgagaaggagagaatgcgg
aggctcatggccgaggacgaggagggctaccgaaaactcattgaccagaagaaggacaag
cgcctggcctacctcctgcagcagacagatgaatacgtagctaacctcacggagctggtg
cggcagcacaaggctgcccaggtggccaaggagaagaaaaagaagaagaagaagaagaag
gcagaaaatgctgaaggacagacgcctgcgatcggacctgatggcgagcctctagacgag
accagccaaatgagcgacctgccggtgaaagtgatccacgtggagagtgggaagatcctg
acaggcacagatgcacccaaggctgggcagctggaggcctggctggagatgaacccgggg
tatgaagtagctccaagatctgatagtgaagagagtggctcagaagaagaggaggaggag
gaggaggaggagcagccgcagcccgcacaaccccccaccctgcctgtggaggagaagaag
aagattccggatcccgacagcgacgatgtctccgaggtggatgcccggcacatcattgag
aatgccaagcaagatgtggacgatgagtacggcgtgtctcaggccctcgctcgtggcctg
cagtcctattatgctgtggcccacgccgttaccgagagggtggacaagcagtcggcactt
atggtcaatggcgtgctcaagcagtaccagatcaaaggcttggagtggctggtgtccctg
tacaacaacaacctgaatggcatcctggctgacgagatgggcctgggcaagaccatccag
accattgcgctcatcacatacctcatggagcacaagcgtatcaacgggcccttcctcatc
atagtgcccctctcaaccctctccaactgggcctatgagtttgacaagtgggccccctcc
gtggtgaaggtgtcctacaagggctccccagcagccagacgtgctttcgtcccccagctc
cgcagcggcaagttcaacgtcttgctgacgacatatgagtacatcattaaggacaagcac
atccttgcaaagatccgctggaagtacatgattgtggacgaaggccaccgcatgaagaac
caccactgcaagctgacgcaggtcctcaacacgcactacgtggcgccccgccgcctgctg
ctgacgggcacaccgctgcagaacaagctgcccgagctctgggcactgctcaacttcctg
ctgcccaccatcttcaagagttgcagcaccttcgagcagtggttcaacgcgcccttcgcc
atgaccggggagaaggtggacctgaacgaggaggaaaccatcctcatcatccgccgtctc
cacaaagtgctgcggcccttcctgctccggcggctcaagaaggaggtggaggctcagttg
cctgaaaaggtggagtacgtcatcaagtgcgacatgtcggccctgcagcgcgtgctctat
cggcacatgcaggccaagggggtgctgctgaccgatggctccgagaaggacaagaagggc
aaaggtggtaccaagaccctgatgaacaccatcatgcagctgaggaagatctgcaaccac
ccctacatgttccagcacattgaggagtccttttccgagcacttggggtttactggcggc
atcgtccaagggctggacctgtaccgagcctcagggaaattcgagctgctcgatagaatt
cttcccaaactccgggccaccaaccacaaagtgctgctcttctgtcagatgacctccctc
atgaccatcatggaagactattttgcatatcgcggcttcaaatacctcaggctcgatgga
accacaaaagcggaggaccgggggatgctgctgaaaaccttcaacgagcccggctccgag
tacttcatcttcctgctcagcacccgggctgggggcctgggtctgaacctccagtcggct
gacactgtgatcatatttgacagtgactggaacccccaccaggacctgcaggcgcaggac
cgtgcccaccgcatcgggcagcagaacgaggtgcgtgtgctccgcctgtgcacggtcaac
agcgtggaggagaagatcctggccgcggccaaatacaagctcaatgtggaccagaaggtg
atccaggccggcatgtttgaccagaagtcctccagccacgagcggcgcgccttcctgcag
gccatcctggagcacgaggagcaggacgagagcagacactgcagcacgggcagcggcagt
gccagcttcgcccacactgcccctccgccagcgggcgtcaaccccgactcggaggagcca
cctctaaaggaagaagacgaggtgcctgacgacgagacggtgaaccagatgatagcccgg
cacgaggaggagttcgacttgttcatgcgcatggacctggaccgccggcgtgaggaggcc
cgcaaccccaagcggaagccgcggctcatggaggaggacgagctcccctcgtggatcatc
aaggacgatgccgaggtggagcggctgacctgtgaggaggaggaagagaagatgttcggc
cgtggctcccgtcaccgcaaggaggtggactacagtgactcactgactgagaagcagtgg
ctcaaggccatcgaggagggcacgctggaggagatcgaagaggaggtccggcagaagaaa
tcgtcacggaagcgcaagcgagatagcgacgccggcccctccaccccaaccaccagcact
cgcagccgcgataaggacgacgagagcaagaagcagaagaagcgcggccggccacctgct
gagaagctctcccctaaccctcccaacctcaccaagaaaatgaagaagatcgtggatgcc
gtgatcaagtacaaggacagcagcagtggacgccagctcagcgaggtgttcatccagctg
ccgtcccgcaaggagctgcccgagtactatgagctcatccgcaagcctgtggacttcaag
aagataaaggagcgcatccgcaaccacaagtaccgcagcctcaacgacctggagaaggac
gtgatgctgctgtgtcagaacgcgcagaccttcaacctggagggttccctgatctatgaa
gactccatcgtcctgcagtcggtcttcaccagcgtgcggcagaaaattgagaaggaggac
gacagtgaaggggaggagagcgaggaggaggaggagggcgaggaggaaggctctgagtca
gagtctcgctcagtcaaagtgaagatcaagctcggccggaaggagaaggcccaggatcgg
ctcaaggggggccggcggcggccgagccgcgggtccagggccaagccagtggtgagcgac
gacgacagcgaggaggagcaggaagaggaccgctcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
