Ovis aries (sheep): 101117022
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Entry
101117022 CDS
T03117
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
oas
Ovis aries (sheep)
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oas04040
]
101117022 (SCN11A)
Ion channels [BR:
oas04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101117022 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
101117022
NCBI-ProteinID:
XP_042092442
EnsemblRapid:
ENSOARG00020016401
LinkDB
All DBs
Position
19:complement(12242991..12322958)
Genome browser
AA seq
1779 aa
AA seq
DB search
MDDRCYPVIFPDGRNFRPFTPDSLAAIKKRIAIQKEKKKSKDWKAAEPEPRPQLDLKVSR
KLPKLYGDIPRDLIAKPLEDLDPFYSNHKTFMVLNKKRTIYRFSAKRALFILGPFNSIRS
LAIRISVHSLFSMFIICTVIINCVFMALAHQKGGISVNVDNAEYVFLGIYLFEALVKILA
RGFILDEFSFLRDPWNWLDSIVIATAFVSYSPYINASSFSLSSLRTFRVFRALKAISVIS
GLKVIVGALLHSVKKLVDVMILTLFCLSIFALVGQQLFMGNLSYKCVSNSCNGDYQDYCF
KKEESTEFKMCGVWMGNRACPEQYKCKDSKKNPDYNYTNFDNFGWSFLAMFRLMTQDSWE
KLYRQTVRTSGLVSVLFFVVVIFLGSFYLVNLTLAVVTMTYEEQNKNVAAETEAKEKMFQ
EAQQLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGSKKRKSFFLRKSGQDQIPGS
DSDEDSSKKPHLLEQTKRLSQNLSVDHCDEHGDSFQRQRALSAVSILTITMQEQEKSQEP
CLPCGENLASKYLVWDCSPWWLDIKKVLRTVMTDPFTELAITICIIINTVFLAMEHYKMD
QNFENILYTGNLVFTGIFMAEMCLKIIALDPYHYFRRGWNIFDSVVALLSLADVIVNHIV
SGKSWISFRSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ
LFGSRFNNKKNHLNSCDPEVLCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQEANPR
LCVIVFLSIMVIGKLVVLNLFIALLLNSFSNEERNGHLEGKVKKTKVQVALDRFRWAFCF
VIHTLEHFFRKRCRRQHLSKQKEVTEGPGGESKDIIPLVTGMKKGPEIWEEFGVLTSVPM
TLHDRTWLAPLAEEEDDAESLGEDKGQAATQPEAGKQCQASEVHQKSKDLTSPGIQSVEI
DVFSEDDPMSIQNLRKKSDATSVLSECSTIGPQDPFMRLLEMVPKKEPERCLPKGLNCCS
LCCTVDKRKSSWITWWSLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDINLDKQPKIQ
ELLKCTDTIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFVIVIVSVTSLIDLMGLKSFR
ILRALRPLRALSQFEGMKVVVYALIGAIPAILNVLLVCLIFWLIFCILGVSLFSGRFGRC
VNATDVKSVIDYNVVANRSQCESGNFYWHTPHVNFDNVLMAYLALLQVATFKGWMDIMYA
AVDSTEEGQQPKFEARSCMYLYFVVFIIFGSFFTLNLFTGVIIDNFNQQQKKISGQDVFL
TEEQKKYYNAMKKLGSKKPQRPIPRPQNKCQGFVFDLVTHQVFDVIIIILILLNMLSMMA
ESHHQSDTMKHLLECLNLAFVVIFAIECLIKIFALRQYYFTNGWNLFDCVIVVLSIVSTV
VSALETQAEIPFPPTLFRMVRLVRIGRILRLVRAARRIRTLLFALMMSLPSLFNIGLLLF
LVMFIYAIFGMNSFRKVKEDSGIDDIFNFQTFISSMLCLFQITTTAGWDSLLSPMLKSNN
SCDPKTESCHLSTIAIIYFVTYIIISSLIVVNMYIAVILENFNVATEESEDPLGEDDFEM
FYEVWEKFDPEATQFINYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRLHCLDI
LFAFTTRVLGESSGLDSMKAAIEEKFMEANPFKKLYEPIVTTTKRKEEERCAAVIQKAFR
KYMMKTKCTLQDRPHSTLQTLSNGDLPSSGVAEGKVHYD
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggtgctacccagtgatctttccagatgggaggaatttccgccccttcact
cctgactctttggctgcaatcaagaagcggattgccatccaaaaggagaaaaagaagtcc
aaagattggaaagcagcagaacctgagcctcgacctcaacttgacctaaaggtctccaga
aagttgcccaagctttatggtgacattccccgtgacctgatagcaaagcccttagaagac
ttggacccattctacagcaatcacaagacatttatggtgttgaacaaaaagagaacaatc
taccgcttcagtgccaaacgtgccttgttcattttggggcctttcaattcaatcagaagt
ttggccattagaatctcagtccattcattgttcagcatgttcatcatctgtactgtcatc
atcaactgcgtgttcatggccttagctcatcagaagggcggcattagcgtgaatgttgac
aatgctgagtatgtcttccttgggatttatttatttgaagcattagttaaaatattggca
agaggttttattctggatgagttttctttcctgcgagatccgtggaactggctggactcc
attgtcattgcaacagcatttgtgtcatattctccatatatcaatgccagcagcttcagt
ctgtcatccctacgtaccttccgagtattcagagctttgaaagcaatttcagtaatttca
ggtttgaaggtcattgttggggccttgctgcactctgtgaagaagcttgtcgatgtgatg
atcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagctcttcatggga
aatctgagctacaagtgtgtcagtaattcctgtaacggtgactatcaagactattgcttt
aaaaaagaagagtccactgaattcaaaatgtgtggtgtgtggatgggcaacagggcttgt
cctgaacaatataaatgcaaagatagcaaaaaaaatcctgactataattacacaaatttt
gacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcctgggag
aagctttatcgacagaccgtgcgtacctcagggctcgtctcggtcctcttctttgtggtg
gtcatcttcctgggctctttctacttggttaacttaaccctggctgttgtcaccatgact
tatgaggagcagaacaagaatgtagctgccgaaacagaagccaaggagaagatgtttcag
gaagcccagcagctgttgaaggaggagaaggaggctctggttgccatgggaattgacaga
agttcacttaattcccttgaagcatcatctttttccccaaagaagagaaagctatttggt
agtaagaaaagaaaatccttctttttaagaaagtctgggcaagaccagattccaggatca
gactctgatgaagattcttcaaaaaagccacacctccttgagcaaaccaaacgactgtcc
cagaatctgtcagtggaccactgtgatgagcacggagactccttccaaaggcagagagcc
ctgagtgctgtcagcatccttaccattaccatgcaggaacaagaaaaatcacaggagcct
tgcctcccatgtggggaaaatctggcatccaaatacctcgtgtgggactgtagcccctgg
tggctagacattaagaaggtcctgagaactgtgatgactgatccctttactgagctggcc
atcaccatctgcatcataatcaacactgtcttcttggccatggagcattacaaaatggac
cagaattttgagaatatattgtacacagggaacttggttttcactggcattttcatggct
gaaatgtgcctaaaaatcattgcactggatccctaccactactttcgtcgaggatggaac
atttttgacagtgttgttgctcttctgagtttggcagatgtgatagtaaaccatatagtt
tcaggaaaaagttggatatcgtttcgttccttaagagtgctgagggtcttcaagttagcc
aaatcctggccaactttaaacacactgattaagatcattggccattctgttggagccctt
ggaaacctgactgtggtcttggccattgtggtctttattttctcagtagttggcatgcag
cttttcggctctagattcaataacaaaaagaatcatttaaactcctgtgaccctgaagtc
ctgtgtttacgacgctggcacatgggggatttctaccactcctttttggtggtattccgc
atcctctgtggcgaatggattgaaaacatgtgggaatgtatgcaagaagctaacccaagg
ctgtgcgttattgtgtttctgtcgatcatggtgattggaaaacttgtggtgctcaacctc
ttcattgccttgctactcaattccttcagcaatgaggagagaaatggacacttggaagga
aaagtcaagaaaaccaaagtccaggtagccctggatcggttccgctgggctttttgtttt
gtaatacatactcttgagcattttttcaggaagcggtgcaggaggcaacatttatcaaag
caaaaagaggtgacagaaggccctggtggagagagcaaagatatcattcccctggtcaca
gggatgaaaaagggcccagagatctgggaggagtttggtgtactaacttctgtaccaatg
accttgcatgatcggacttggttggccccacttgcagaggaagaagatgatgctgaatcc
cttggtgaagataagggacaggctgccacacaacctgaggctggaaaacagtgtcaggcc
agtgaagttcatcagaagagcaaggatctcactagtccaggaattcagagtgtggaaatt
gatgtattctctgaagatgatcctatgtcaatacagaatcttcggaagaagtctgatgct
acgagtgtgctctcagaatgtagcaccattggtccacaggatccctttatgcggctactt
gaaatggttcccaaaaaggaaccagagaggtgtttgcccaaaggcctgaattgctgctct
ctatgctgtactgtggacaagagaaagtcctcctggatcacttggtggagcctgcgaaaa
acctgctaccaaatagtgaaacacagctggtttgagagctttattatctttgtgattctg
ctgagcagtggggcactggtatttgaagatattaaccttgataaacaacccaaaatccaa
gaattacttaaatgtactgacactattttcacatacatttttatcttggagatgggtctg
aaatgggtggcctttggatttgggaagtatttcacaagtgtctggtgctggctcgatttc
gtcattgtgattgtctctgtgaccagtctcattgacttaatgggcttgaagtccttccgg
attcttcgagcactgaggcccctgcgagcattgtcccagtttgaaggaatgaaggtggta
gtttatgctctcataggtgccatacctgctattctgaatgttttgcttgtctgcctcatt
ttctggctcatattttgtatcctgggagtaagtctgttttctggaagatttggaagatgt
gttaatgcaacagatgtaaaatcagtcatagattataacgttgttgcaaaccggagtcag
tgtgaaagtggaaatttctattggcacaccccgcatgtcaactttgacaatgtgttaatg
gcttaccttgcgctactgcaagtggcaacatttaagggctggatggatattatgtatgca
gctgttgattccacagaggaaggacaacagccaaagtttgaggcacgttcttgcatgtac
ctttacttcgtagtttttatcatctttggctcattcttcactctgaatctctttactggt
gttattattgacaacttcaaccaacagcagaaaaagataagtggccaagacgtctttctg
acagaagaacagaagaaatactataatgcaatgaaaaaattaggatccaaaaaacctcaa
aggcccattccaaggcctcagaacaaatgccaaggctttgtgtttgacctcgtcacacac
caggtctttgacgtcattatcatcatcctcattctcctcaacatgctgagcatgatggct
gaatcacatcaccaatcggacaccatgaaacatttacttgagtgtctcaacctggccttt
gtggtcatctttgcaattgagtgtctcatcaaaatctttgctttgaggcaatactacttc
accaatggctggaatttatttgattgtgtgatcgtggtcctttctattgttagtaccgtg
gtttctgccttggaaacccaagccgagattcctttccctccaacactgttcagaatggtt
cgcttggttcggattggccgaatcctgagacttgttcgagcagcacgaagaatcagaact
ctgcttttcgctctgatgatgtccctgccctctctatttaatattggtcttctcctcttt
ctggttatgtttatttatgccatttttggtatgaactcttttcgcaaagtgaaggaagat
tctggaattgatgacatcttcaacttccaaacttttataagcagcatgctctgcctcttc
cagataaccacgacggcaggctgggattctctcctcagccccatgttaaaatcaaataat
tcctgtgaccccaagacagagagctgtcacctctctaccatagccataatctacttcgtc
acttatatcatcatctcctctctcattgtggtcaacatgtatattgctgtgattttagaa
aacttcaatgtagccactgaagaaagtgaggaccctttgggtgaagatgactttgaaatg
ttctacgaagtctgggaaaagtttgacccagaagcaacacagtttatcaactattctgcc
ctttctgactttgctgatgcccttcctgagcctctgcgtgtggcaaagccaaataaatac
caatttttagtcatggacttgccaatggtgagtggagatcgtctccattgcttggatatt
ctcttcgctttcaccacgagggtacttggtgagtccagtggcctggatagcatgaaagca
gcgatagaggagaagttcatggaggcaaaccctttcaagaagttatatgaacccatagtc
accaccaccaaaaggaaggaagaggaaagatgtgctgctgttattcaaaaggcctttcga
aagtacatgatgaagaccaagtgtaccttgcaagacaggcctcattcaaccctccagaca
ctctccaatggagacttacccagctctggggtggccgagggcaaggtccattatgactga
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