Ovis aries (sheep): 101117384
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Entry
101117384 CDS
T03117
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
oas
Ovis aries (sheep)
Pathway
oas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101117384 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oas03032
]
101117384 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
oas03400
]
101117384 (TOPBP1)
DNA replication proteins [BR:
oas03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
101117384 (TOPBP1)
DNA repair and recombination proteins [BR:
oas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101117384 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
101117384
NCBI-ProteinID:
XP_004003381
LinkDB
All DBs
Position
1:256379684..256453020
Genome browser
AA seq
1521 aa
AA seq
DB search
MSKNDKEPFFVKFLKSSDNSECFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGDAFDHLQKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTVSCTSLEKDR
REEVHKYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKIARYTDINMEDFKCPIFLGCIICVTGLCTSDRKSVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTMQWFFDSVEKGFCQDESIYKTEPRSEAKSMPDTSTPT
GQINTIDSRTLSDVSHISNINASCINESICNSVNSKLEPTVENLENLDVSAFQAPEDLLD
GCRIYLCGFNGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDDDDELKQFWDKSAHRPH
VVGAKWLLECFSKGYMLPEEPYIRVNYQPMEIPVSDQPESKTALLKRKNSSFSKNDFAPE
EKHEQADEDLLSQYQTNNPTVVEVAKSEVGLCGDCTHVEPLNDSTHISLQEHQSSISHCL
PDVSTITEEGLFSQKSFLVLGFGNENESNIAAIIRENAGKIVSLQSRVVADYAVVPLLGC
EVQATVGEVVTNTWLVTCIDYQTLIDPKSNPLFTPVPVMAGMTPLEDCVLSFSQCVGAEK
DSLTFLANHLGASVQEYFVRKSNAKKGMFASTHLVLKEPGGSKYEAAKKWNLPAVTIAWL
LESARLGKRANENHFLIENSSKEEQSLETETTNEVNLNPDTPEHPVTHRETQRKTAVTPL
DMNRFQSRAFRMVMSQHSGQASVSPAPGQSLQKEPSLHLDTPSKFLSKDKLFKPSFDVKD
ALAALETPGGPSQQKRKLSTPLSEVIVKNLKVALANSSRNAVALSASPQLKDAQSEKEDA
PKPLQKVVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSV
KERGVHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDGRLCNNRLSSAGSPM
RDDEPDHMPVEENDIDNMTTSNKELTTSNGNGRNDSKGALTQTLEMRENFQKQLQEIMSA
TSIVKPQGQRTSLSRSGCNSTSSTPDSTRSARSGRSRVLEALRQSRQTVPDINTEPSQNE
QIIWDDPTAREERARLASNLQWPSCPTQYSELQVDVKKLEDSPFQEPLHDSEIAEQAVCD
PGNVCVTGAPKHPISEELETPMKDSHLIPTPQAPSIAFPLANPPVAPHPREKIITIEETH
EDLKKQYIFQLSSLNPQERIDYCHLIEKLGGSVIEKQCFDPSCTHIVVGHPLRNEKYLAS
VAAGKWVLHRSYLEACRTAGRFMSEEDYEWGSSSILDVLTGINVQQRKLALAAMRWRKKI
QERQESGIIEGAFSGWKVILHVDQSRESGFKRLLQSGGAKVLPGYSVSLFKEATHLFSDF
NKQKPDDSGVNIAEAAAQNVYCLKTEYIADFLMQESPPQVENYCLPEAASFLQNKKEPGP
GFSQKRKAPTEKNKIKRPRVQ
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaatgacaaagaaccgttttttgtgaagtttttaaagtcttcagacaattct
gaatgtttttttaaagctcttgagtcaataaaagaattccaatcagaagaatatcttcag
attattacagaagaagaggcattgaaaataaaggaaaatgatagatcactgtatatctgt
gacccctttagtggtgatgcctttgatcatctccaaaagcttggttgcagaattgttggt
cctcaagtagtcatattttgtatgcaccaccagcgatgtgtcccaagagctgaacatcca
gtttataacatggttatgtctgatgtaaccgtgtcttgtacaagcctggaaaaagacaga
agggaagaagttcataaatatgtacaaatgatgggtggacgtgtatacagagaccttaac
atatcagtaactcaccttattgcaggagaagttggtagcaaaaaatacttggttgctgca
aacctaaagaaacctattttgcttccttcttggataaaaacactttgggagaagtcacag
gagaagaaaatagctagatataccgatataaacatggaagacttcaagtgtcctattttt
cttggttgcataatctgtgtgactggcttatgtacctcagacaggaagtcagttcagcag
ctcacagtaaagcatggaggacagtacatgggacaattgaaaatgaatgagtgtacacac
ctcattgtgcaagaaccaaaaggtcaaaaatatgaatgtgccaagagatggaatgtacac
tgtgtgaccatgcaatggttttttgacagtgttgaaaaaggtttttgtcaggatgaatcc
atatacaagacagagcctagatcagaagcaaagagtatgcctgatacttcaactcctact
ggccagatcaacacaattgatagtcgtactctttcagatgtcagccatatttccaacatc
aatgcaagctgcataaatgaatcaatatgtaattcagttaatagcaaactggaacctaca
gttgaaaatctggaaaatttggatgtcagtgcatttcaggcacctgaagatttattagat
ggttgtcggatctatctttgtggttttaatggcagaaagctagataaactgagaagactt
attaacagtggaggtggagttcgttttaatcagctcaatgaagatgtaactcatgttatt
gtgggagatgatgatgatgaattgaagcagttttgggataaatcagcccacaggcctcat
gtagtgggagcaaaatggttgctagagtgttttagtaaaggttatatgcttcctgaagag
ccatacatccgtgttaactaccagccaatggaaattccagtttcagatcaacctgaaagt
aaaacagcccttttaaaaaggaagaacagcagcttctctaagaatgactttgctcctgaa
gaaaagcatgagcaagctgatgaagatctactctctcaatatcagactaataacccaaca
gtagttgaagttgccaagtccgaagttgggctctgcggtgactgtactcatgtggagccc
cttaatgattctactcatatttctctgcaagaacaccagtcttccatcagtcattgcctc
cctgatgtttctacaattaccgaagaaggtttatttagccaaaagagtttcctagttttg
ggttttggtaatgaaaatgaatctaatattgcagccatcataagagaaaatgctggaaaa
attgtgtcccttcagagcagagttgttgctgattatgctgtggttcctctgctggggtgt
gaagtacaggcgactgtgggagaagttgtaacaaacacatggctggtaacttgtatagac
taccagactttaattgatccaaagtcaaatcctctcttcacaccagttccagttatggca
ggaatgactcctttagaggattgtgttctttcattcagccaatgtgtaggagctgaaaaa
gactcattgacattcttagcaaatcaccttggagccagtgttcaggaatactttgttcgc
aagtccaatgcaaagaaaggcatgtttgccagtacacatcttgttttgaaagagccaggt
ggttctaaatatgaagctgccaagaagtggaatttaccagcagtcactatagcttggctg
ttggagtctgctagattgggaaagagagcaaatgaaaaccatttcctgattgaaaattca
tctaaagaagaacaaagtttggaaactgaaacaacaaatgaggtgaatctaaatccagat
actccagagcatcctgtaacacatcgggaaactcagaggaaaacagccgttacaccttta
gatatgaaccgcttccagagtagggctttccgcatggtgatgtcacagcactctggacag
gcttcagtctccccggccccaggacagtcacttcagaaggagccctcattacacctggat
acgccatcaaagtttctgtccaaggataaactcttcaagccttcctttgatgtgaaggat
gcacttgcagccttggaaactccaggaggtcccagccagcagaaaaggaaactgagtaca
ccactctcagaagtcatcgtcaaaaacctgaaagttgctttggcaaatagctctcgaaat
gctgttgctctttctgccagccctcaactgaaggatgcccagtcagaaaaggaagacgct
ccaaagccacttcagaaggtagtggtgtgtgttagtaagaaactcagtaagaagcagagt
gaactaaacgggattgcagcctctctaggtgcagactacaggtggagttttgatgagaca
gtgactcatttcatctatcaagggcgaccaaatgacactaatcgggagtataaatctgta
aaagaaagaggagtacacattgtttcagagcactggcttttagaatgtgcccaggagtat
aaacatcttcctgaatctctttatccgcatacttataatcccaaaatgagcttggacatc
agtacagtgcaagatggccgactctgtaataaccgactatcctcagctggctctccaatg
agggatgatgagccagatcatatgcctgtagaagaaaatgatatagacaatatgaccacc
agtaataaagaactaacaacatcaaatggaaatggaaggaatgactctaaaggagctctg
acacagactttggagatgagagagaactttcaaaagcagcttcaggagataatgtctgca
acttcaatagtgaaaccccaagggcagaggacttccctctcaagaagtggttgtaacagt
acctcttcaactcctgacagcacccgctctgcccgcagtggacgaagtagagtcctagag
gcgctgaggcagtctcgtcaaacagtacctgatatcaacacagaaccctcccaaaatgag
cagatcatttgggatgaccctacagccagggaggagagagcaagacttgccagcaatctg
cagtggcctagttgtcccacacaatactctgagcttcaggttgatgttaaaaaattggag
gattctcctttccaggagcctttacatgactcagaaattgctgaacaggctgtttgtgat
cccgggaacgtatgtgtgactggagccccaaaacacccgatctctgaagaactggaaact
ccaatgaaagacagccacctgatccctacgcctcaagcccccagtattgccttcccccta
gccaacccacctgtggctccacaccctagagaaaagattataacaatagaggagactcat
gaagacttaaaaaaacagtacatatttcagttgtcatctctgaatcctcaagaacgtatt
gattattgtcatctgattgaaaaactaggtggatcagtgattgagaagcagtgctttgat
cccagctgtacacacattgttgtggggcatccacttcgcaacgagaaatatttagcttcc
gtggcagcaggaaagtgggtactccatcgctcctaccttgaagcttgcaggactgctggg
cgcttcatgtcggaagaagactatgagtggggaagtagttccatactcgatgttttgact
ggaatcaatgtacagcaacgaaaattagcacttgcagcaatgagatggaggaaaaaaatc
caggaaagacaagaatcaggcattattgagggggcgtttagtgggtggaaagttatttta
catgttgatcagtcccgagaatcaggattcaaacgcctgcttcagtcaggaggagcaaag
gtgctgcctggttattctgtatctttatttaaagaagctacacatctcttttccgacttt
aataaacagaaaccagatgactcaggagttaatatagcagaagctgctgcccagaatgta
tactgcttgaaaacagaatacattgctgattttcttatgcaggaatcccctcctcaagta
gaaaattactgtctaccagaggctgcttcatttcttcagaataaaaaggaacctgggcct
ggattctcacaaaagaggaaagctcctacagaaaaaaataaaatcaaacgacccagagta
cagtaa
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integrated database retrieval system
