Ovis aries (sheep): 101117435
Help
Entry
101117435 CDS
T03117
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
oas
Ovis aries (sheep)
Pathway
oas04151
PI3K-Akt signaling pathway
oas04510
Focal adhesion
oas04512
ECM-receptor interaction
oas05165
Human papillomavirus infection
oas05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101117435 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101117435 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101117435 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
101117435 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101117435 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oas00536
]
101117435 (TNR)
Glycosaminoglycan binding proteins [BR:
oas00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101117435 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Tenascin
EGF_2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
101117435
NCBI-ProteinID:
XP_027831695
EnsemblRapid:
ENSOARG00020018083
LinkDB
All DBs
Position
12:complement(55883746..56369922)
Genome browser
AA seq
1358 aa
AA seq
DB search
MGADGETVVLKNVLIGVNLILLGSLLKPSECQLEVTMERVQRPAVEEEGGTASYNASSKE
QPVVFNHVYNINVPLDSLCSSGLEASAEHEVSTEDEVLTEYTGQTSDHESQVTFTHRINL
PKKACPCASSAQVLQELLSRIEMLEREVSVLRDQCTSNCCPESAATGQLDYIPHCSGHGN
FSLESCGCICDQGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS
SRGLCVNGECVCEEAYTGEDCSELRCPGDCSGKGTCANGTCLCQEGYIGEDCSQRRCPNA
CSGRGHCQEGLCLCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTALGGLQLQQRVPGDWSGVTISELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG
LRFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTHIQVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVWVSAVRGTNESEATATQFTTEIDAPKNL
RVGSRTATSLDLEWDNSEAEVQEYKVEYSTLAGEQYHELLVPKSIGPTSRATLTDLVPGT
EYGIGISAVMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHAVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERICTLVHTAMDNPADLT
ATNITPTEALLQWKAPVSEVENYVIVLTHFAVAGETILVDGDSEEFQLVDLLPRTHYTVT
MYATSGPLTSGTVSTNFSTLLDAPANLTASEVTRQSALISWQPPRAEIENYILTYKSTDG
SRKELIVDAEDTWIRLEGLLESTDYTVLLQAAQDMERSSITSTAFATGGRVFPHPQDCAQ
HLMNGDTLSGVYTIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWAEYRVG
FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFASYDRFSVEDSRSLYKLRLGGY
NGTAGDSLSYHQGRPFSTEDRDNDIAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYSHRLVAGRKRRSLQF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagacggggagacagtggtcttgaagaacgtgctcattggcgtcaacctgatc
cttctgggctccttgctcaagccctcagagtgtcagctggaggtcaccatggaaagggtc
cagagaccagcagtggaggaggaaggaggcactgccagctacaacgcatccagcaaggag
cagccggtggtcttcaaccacgtgtacaacatcaatgtgcccctggacagcctctgctcc
tcagggctggaggcctcggccgagcatgaagtgagcaccgaagacgaggtgctgacggag
tacacgggccagacctcggaccacgagagccaggtcaccttcacgcacaggatcaacctc
cccaagaaggcctgcccatgtgccagctcggcccaggtgctacaggagctgctgagccga
attgagatgctggagagggaggtgtcagtgctgcgggaccaatgcaccagcaactgctgc
ccagagagtgcagccacaggacaactggactatatccctcactgcagtggccatggcaac
tttagcctggagtcctgtggctgcatctgcgatcaaggctggtttggcaagaactgctcg
gagccctactgccccctgggctgctccagtcggggcgtgtgtgtggacggccagtgcatc
tgtgacagcgagtacagcggggacgactgctcggagctccggtgcccgacggactgcagc
tcccgggggctgtgtgtgaatggggagtgtgtctgcgaagaggcctacacgggcgaggac
tgcagtgagctgaggtgccccggggactgttcagggaaggggacctgtgccaacggtacc
tgcctgtgccaggagggctacatcggtgaggactgcagccagcggcggtgtccaaatgcc
tgcagcggccgaggacactgccaggaggggctgtgcctctgtgaagagggctaccagggc
cctgactgctcagcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggccctggggggcctccagctccagcagcgggtgcctggagattggagtggcgtc
accatctcagagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccacccatctctccacgcctcaaggg
ctccgattcaagacgatcacagagaccaccgtggaggtgcagtgggaacccttctcattc
tccttcgacgggtgggagatcagcttcattccaaagaacaatgaaggaggggtgattgcc
cagctccccagtgatgtcacatccttcaaccagacgggactaaagcctggggaggaatac
attgtcaatgtggtggctttgaaagagcaagcccggagcccccctacctcggccagcgtc
tccactgtcattgatgggcccacgcatatccaagttcgagatgtctctgacaccgtggcc
ttcgtggagtggaccccacctcgagccaaagtcgatttcattctcttgaagtacggcctg
gtaggcggggaaggtgggaagaccaccttccggctgcagcctcccctgagccagtactcg
gtgcaggccctgcggccaggctcccgatacgaggtgtgggtcagcgcagtgcgcggaacc
aacgagagcgaggccaccgccacccagttcacaacagagatcgatgcccccaagaacctg
cgggttggttcccgcacagcaaccagccttgacctcgagtgggacaacagtgaagcagag
gttcaagagtacaaggttgagtacagcactttggcgggcgagcagtaccatgagctgctg
gtccctaaaagcattggaccaaccagcagagccacactcactgatctggtgcctggcact
gagtatggaattggaatatccgccgtcatgaactcacagcaaagtgtaccagccaccatg
aatgccaggactgaactcgacagtcctcgagacctcatggtgacagcctcctcggaaacc
tccatctccctcatctggaccaaggccagcggccccattgaccactaccgaattaccttt
acgccatcctctgggatcgcctctgaagtcaccgtgcccaaggacaggacctcgtataca
ttgacagatctagagcccggggcagagtacatcatttcaatcacagccgagaggggccgg
cagcagagcctggagtccaccgtggatgccttcacaggcttccgccccatctcccatttg
cacttttctcacgtgacctcctccagtgtgaacatcacctggagtgacccatcccctcca
gcagacagactcattctcaactacagcccccgggatgaagaggaagaaatgatggaggtc
tccctggatgccaccaagaggcatgctgtcctgatgggcctgcagccagctaccgagtac
attgtgaatctggtggcagtccatggcacagtgacctctgagcccatcgtgggctccatc
accacaggaattgatcctcccaaagacatcacaattagcaatgtgaccaaggactcagtt
atggtctcctggagccctcccgttgcatcttttgattactaccgagtatcctatcggcca
acacaagtgggacgactggacagctcagtggtgcccaacacggtgacagaattcaccatc
accaagctatacccagctacggaatatgaaatcagcctcaacagtgtgcggggaagggag
gagagtgagcggatctgcactcttgtgcacacagccatggacaatcctgcggatctgact
gctaccaacatcaccccaaccgaagccctgctgcagtggaaggcgcctgtgagcgaagtg
gagaactacgtcattgttctcacccactttgcagttgctggagagaccatcctggttgat
ggggacagtgaggaattccagcttgttgacctgcttcctaggacccactacactgtcacc
atgtatgccaccagcgggcctctcaccagtggtaccgtcagtaccaacttctctaccctc
ctggatgctcctgcaaatctgacagctagtgaagtcaccagacaaagtgccctgatctcc
tggcagcctcccagagcagagattgaaaactacatcttgacctacaaatccactgatgga
agccgcaaggagctgattgtggacgcggaggacacgtggatccgacttgagggcctgttg
gagagcacagactacacggtgcttctacaggcagcccaggacatggagcggagcagcatc
acctccaccgcctttgccacagggggccgggtcttccctcatcctcaagactgtgcccag
catttgatgaacggagacactctgagtggggtttacaccatcttcctcaacggagagcta
agccagaagttacaggtgtactgcgacatgaccaccgatgggggtggttggattgtgttc
cagaggcggcagaatggccaaactgattttttccggaaatgggctgagtaccgtgttggc
tttgggaacctggaggatgagttttggctggggctggacaacatacacaggatcacgtcc
cagggccgctacgagctgcgcgtggacatgcgtgacgggcaggaggccgccttcgcttcc
tacgacaggttctccgttgaggacagcagaagcctgtacaaactccgcctaggaggttat
aacggcaccgcaggggactctctcagctaccatcagggccgcccattctccacggaggac
agagacaatgacatagcagttaccaactgtgccatgtcatacaagggcgcttggtggtat
aagaactgccaccggaccaacctcaatgggaaatacggcgagtccaggcacagtcagggg
atcaactggtaccactggaaaggccacgagttctccatccccttcgtggagatgaagatg
cgcccatacagccaccgtctcgtggcagggagaaaacggcggtccttgcagttctaa
DBGET
integrated database retrieval system