Ovis aries (sheep): 101117921
Help
Entry
101117921 CDS
T03117
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
oas
Ovis aries (sheep)
Pathway
oas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101117921 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oas03041
]
101117921 (PRPF40B)
Spliceosome [BR:
oas03041
]
Complex A
U1 snRNP components
U1 related factors
101117921 (PRPF40B)
Complex B
101117921 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
101117921
NCBI-ProteinID:
XP_027823165
LinkDB
All DBs
Position
3:complement(136623198..136643472)
Genome browser
AA seq
897 aa
AA seq
DB search
MSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGI
MPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALW
SEHVAPDGRVYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKE
SRWTRPKDLDDLEALVKQEAAGKQQQPQTLQPQPPQPQPDPPPAPPGPTLLPTGLLEPEP
GGSEDCTVSEAAQPPEQGFLRQPEEGPGSSAGQHQPPQQEEEESKPEPERSGLSWSNREK
AKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEE
ARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFL
AKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKE
DALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWME
LYPAVSTDIRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTA
FEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRLRRREAAFRSMLR
QAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLETECQHLHSKGRKHG
RKGKKHHRKRSHSPSVSWRGSESGDEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESG
GAALGGRGSPSSRLLLGSDHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAAKESDEKE
PEQDKDRDLRRAELPNRSPAFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccgattctggtccccggcccccagcagcgcctgcccccttcccaccgggg
ccccccatgatgccaccacccttcatgcctcctccaggaatccccccaccttttcctcca
atggggctccctcccatgagtcagagaccaccagccatcccccccatgccacctggcatc
atgcccccaatgctcccaccaatgggggcaccaccaccactcacacagataccaggaatg
gtacctcccatgatgccaggaatgctgatgccagcagtgcctgtcaccgcagcgacggct
ccgggtgcggacaccgccagctctgctgtggctgggacaggccctccgagggccctatgg
agtgagcatgtggcccctgatgggcgcgtctactactacaatgctgacgacaagcagtcc
gtgtgggagaagcccagcgtgctcaagtccaaggcagagctcctgctgtcccaatgtccc
tggaaagagtacaagtcggacacaggcaaaccttactactacaacaatcagagtaaggag
tcccgctggacccggcccaaggacctggatgacctggaggctctagtcaaacaagaggct
gcagggaaacagcagcagccgcagacactacagccacagcctcctcagcctcagcccgat
cccccacctgcgccgcccggccccaccttgctgcccacaggcctcctagaacctgagccg
ggcgggagtgaagattgcaccgtgtcagaggctgcccagcccccagaacaggggttcctg
cggcagccagaggagggccccggcagttctgctggacagcatcagccaccacagcaagag
gaagaagaatcaaaaccagagccggagagatctggcctcagttggagcaaccgggagaag
gcaaagcaggccttcaaggagctgctgagggacaaggctgtcccctccaatgcttcgtgg
gaacaggccatgaagatggtggtcactgacccccgttacagtgccttgcccaaactgagt
gagaaaaagcaggcattcaatgcctacaaagcgcagcgggagaaggaggagaaggaagag
gcccggctaagagccaaggaggccaagcagaccttgcagcatttcctggagcagcatgaa
cgcatgacttccaccactcgctaccggcgggcagaacagacctttggggagctggaggtc
tgggctgtggtccctgagagggatcgaaaagaggtttatgatgatgtcctcttcttcctg
gccaagaaggagaaggaacaagccaagcagctgcggcgccgcaacatccaggccctgaag
agcatcctagatgggatgagtagtgtcaacttccaaaccacatggtcccaggcccagcag
tacctcatggataaccccagctttgctcaggaccatcagctacagaacatggacaaggaa
gatgcgctgatctgctttgaggagcacatccgagctttggagagggaggaggaggaggag
cgagagcgagcccgacttcgggagcggcgccagcagcgcaagaaccgggaggccttccag
accttcctggatgagctgcacgagacagggcagctgcactccatgtccacctggatggag
ctgtacccagcggtcagcactgatatccgctttgccaacatgctgggccagccgggctcc
acccctctggacttgttcaagttctatgtggaggagttgaaggcgcggttccatgatgag
aagaagatcataaaggacatccttaaggaccggggcttctgcgtggaggtgaacacagcc
ttcgaggacttcgcccacgtcataagctttgacaagagggctgctgcgctggatgcaggc
aacatcaagctgactttcaatagtctgctggagaaagcagaggcgcgtgagagagagcgg
gagaaggaggaggcccggcggctgcggcgcagggaagctgccttccgaagcatgctgagg
caggctgtgcctgctctggagctgggcacggcctgggaagaggtccgtgagcgctttgtg
tgcgactcagcctttgagcagatcaccctggagtcggagcggatccggctctttcgggag
ttcctgcaggtactggagacggaatgccagcacctccacagcaaaggcaggaaacacggc
agaaagggcaagaagcaccatcgcaagcgttcccactcgccttcagtgagttggcggggc
tctgagtcaggagacgaggagctgcccccgccctctctccggccccccaagcggaggcga
cggaacccctcggagtcgggctctgagccctcttcctcacttgattctgttgaaagtggg
ggtgctgcccttggaggacggggttccccctcctctcgccttctcctcggatcagatcat
ggtcttcggaaagccaagaaaccaaaaaagaaaactaagaagagaagacacaagtcgaac
agtcccgagagtgagacagaccctgaggagaaagctgccaaggagagtgatgagaaagaa
ccagaacaggacaaggacagggacctccggcgggcagagctccctaatcgctccccagcc
tttggaatcaaaaaggagaagacgggctgggacacgtcagaaagcgagctgagcgagggt
gagctggaaagacggcggcggacgctcttgcagcagctggacgaccaccagtga
DBGET
integrated database retrieval system
