Ovis aries (sheep): 101118172
Help
Entry
101118172 CDS
T03117
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
oas
Ovis aries (sheep)
Pathway
oas04151
PI3K-Akt signaling pathway
oas04382
Cornified envelope formation
oas04510
Focal adhesion
oas04512
ECM-receptor interaction
oas04518
Integrin signaling
oas04820
Cytoskeleton in muscle cells
oas04926
Relaxin signaling pathway
oas04933
AGE-RAGE signaling pathway in diabetic complications
oas04974
Protein digestion and absorption
oas05146
Amoebiasis
oas05165
Human papillomavirus infection
oas05200
Pathways in cancer
oas05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101118172 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101118172 (COL4A4)
04518 Integrin signaling
101118172 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101118172 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101118172 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101118172 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
101118172 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
101118172 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101118172 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
101118172 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101118172 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
101118172 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101118172 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oas04147
]
101118172 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
oas00536
]
101118172 (COL4A4)
Exosome [BR:
oas04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101118172 (COL4A4)
Glycosaminoglycan binding proteins [BR:
oas00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101118172 (COL4A4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101118172
NCBI-ProteinID:
XP_027821047
LinkDB
All DBs
Position
2:complement(229248641..229401301)
Genome browser
AA seq
1398 aa
AA seq
DB search
MALVRRSFRCNKLLATDSWSLILILFSVQYAYGGGKKFIGLCGGRDCSLCQCFPEKGSRG
QPGPPGPQGPIGPLGPPGPTGIPGEKGMKGDSGRPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGSRGRPGIDGYNGSRGDPGIPGERGALGPRGPPGLPGEKGEKGNSVFILGATKGM
QGDRGDPGPPGSPGSRGVRGPAGPAGYPGEPGLAGPPGPPGSPGLKGNPGVGVKGQMGDP
GEVGQQGSPGPTLLVQPPDSGLYKGEKGIKGLPGMTGPPGPPGAKGKPGIGRKGEKGIPG
FPGPRGDPGSYGSPGFPGLKGEPGLFGDPGSFGFFGPKGDPGDRGHPGPPGVLVTPSLPL
KGPPGDPGRPGRYGETGAVGPRGPPGAPGRPGEACAGMTGPPGPRGFPGHPGFPGAAGVP
GRADSAPGKPGNQGPTGLPGVPGLPGPPGSDVVYCTVGQPGPQGIKGKVGPPGRRGSKGE
KGSSGLCACQPGPMGPPGPPGPPGRQGSKGDLGLPGWLGEKGSPGPPGAKGSPGLPGKPG
ASGLPGNKGEKGDMVVSRVKGHKGERGPDGPPGLPGQEGQHGRDGYAGEKGDPGLPGDHE
DAAPGDKGPPGPPGPPGRAGPRGPPGLGFPGPPGERGQPGAPGWPGNRGPDGRKGQKGDT
IPCNVTYPGRPGPPGFDGPPGPKGLPGHRGAPGLRCLDGQKGQRGKPGISERPGPPGFRG
DTGEPGLGGEKGSSPVGPPGAPGSPGVTGQKGPPGDPAIGYPGLPGKSGLPGAPGSKGLR
GDAGHPGTAGPAGMPGFPGLQGPKGREGNAGFPGIPGPPGHSCERGAPGIPGQPGLPGAP
GSPGAPGWKGQRGDMGPLGPAGMKGLPGVPGRPGADGTPGLPGVPGPTGDDGLPGLPGPK
GPQGLPGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGSLGDRGLKGVKGARGPPGYEGEM
DIISKKGETGEPGPSGDGGFPGENGDKGHPGMQGRRGEPGSYGPPGLHPGEPGRNGQPGL
PGPPGPPGSPGLRGIIGFPGFPGDQGEPGSPGCPGPSGIDGTRGPKGYKGESASQFGLPG
PKGEPGSPGYPGQLGASGEQGLPGAQGPGGPPGRPGPPGFSGPTGCPGNPGEPGLQGPPG
EVGDPGPRGIVGDPGAPGLPGIKGPSGSPGLNGLHGLKGQKGSKGASGSHEMGPPGPVGM
PGPKGETGDPGNPGISPPGPFGERGPPGPPGPPGRAGSPGPPGAPGKALKGDIPDPGLPG
DQGPPGPDGPRGVPGPPGPPGSVDLLKGEPGDCGLPGPPGLPGPPGPPGHKGFPGCDGKH
GQKGPMGFPGPQGPPGSPGPPGDKGLPGPPGRRGPLGPPGKLLMPNHLHLAYMECFFKNI
YYEGYLSESNYSEIISKF
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggcattggtaaggcgttctttcaggtgcaacaagctcttggccaccgattcctggtca
ctcatacttattctcttttctgtacaatatgcatatgggggtggaaagaagtttattggt
ctctgtggaggaagagattgctctctttgccagtgctttcctgaaaagggatctcggggt
caaccgggaccaccagggccacagggtcctattggacccctgggaccaccaggacccact
gggatcccaggagagaaagggatgaaaggagacagtggccgtcctggagcagcaggtgac
aaaggtgataagggtccaaccggagttcctggatttccaggtctggatgggatacctggg
cacccagggcctcctggatccagaggcagacctggcatagatggctacaatggctcaaga
ggtgatccagggattccaggagaaagaggagctcttggcccacgaggccccccagggctt
cctggagaaaaaggagaaaaaggaaattcagtgttcattttaggtgccactaaaggtatg
cagggcgacagaggggacccaggacctcccggctcaccaggatcaaggggagtgagaggc
ccagcaggcccagcggggtacccgggagagcccgggttagcaggacctccaggcccccct
gggagtccaggcttaaagggtaatcctggcgtaggagtaaaggggcaaatgggagacccg
ggtgaggttggccaacaaggttctccgggacccactctgttggtgcagccacccgattct
ggtctctataaaggagaaaagggtattaaaggactgcctggaatgactggacctcctgga
ccaccaggagccaagggaaaacctggtattgggagaaaaggagagaaagggattcctggg
tttccaggacctcggggggaccctggttcctatggatctccaggttttccaggattaaag
ggggaaccaggactgtttggagatcctgggtcatttggattttttggcccaaagggagat
cctggagaccgtgggcacccaggaccaccaggggttttggtaactccatctcttccactc
aaaggccctccaggggatccagggcgccctggccgctatggagaaacaggggctgttgga
ccacgtggtcctcctggtgccccaggaagaccaggggaagcctgtgcaggcatgacggga
cctcctgggccacgagggtttcctggtcaccccggatttccaggggcagctggtgttcct
gggagagctgattctgctccgggaaaaccaggcaaccagggaccaaccgggctgcctggg
gtgccaggactgccgggacctccaggatcagatgttgtatattgtactgttgggcaacct
ggaccacaaggaataaaaggcaaagtgggtcctccaggaagacgaggctccaaaggagaa
aaagggagctcagggctctgtgcctgccagcctggtcccatgggcccaccaggccctcca
gggcctcctgggaggcaagggagtaagggagacttggggctccctgggtggcttggagaa
aaaggttccccaggccctcctggtgccaaaggatctccagggctaccaggaaaacccggt
gcctcaggactacctggcaacaaaggagaaaaaggtgacatggttgtatcgagagtgaaa
ggacacaaaggagaaagagggcctgatgggccccctggacttccagggcaggagggacaa
cacggacgagatggatatgctggagaaaagggagacccagggctgcctggtgatcacgaa
gatgcagccccaggtgataaagggcctcctggaccgccaggcccccctggcagagcggga
cctagggggcccccaggcctgggatttcctggccccccaggagagagagggcaaccagga
gcaccaggctggccaggcaacaggggtcctgatggtcggaagggtcagaaaggtgataca
attccttgtaacgtaacataccctgggaggccaggccctccaggttttgatggtcctcca
ggtccaaagggacttccaggtcatcggggtgctcctgggctgaggtgtttggatgggcaa
aagggtcaacgtggcaaaccaggaatctcagaaagacctggtccacctggtttccgtggt
gatacaggagaaccaggtttgggaggtgaaaaggggtcctcccctgttgggcccccaggc
gctccaggttcacctggagtgactggtcagaaaggacccccaggagatcctgctatcggc
tacccaggactcccaggaaagagcggtcttccaggagcaccagggtccaaaggactcaga
ggcgatgccgggcatccagggaccgcagggccagctggcatgcccggatttccaggtctc
caaggtcccaaaggccgagagggaaatgctgggtttccagggatcccaggcccacctggt
cactcctgtgaaagaggtgctccagggataccagggcaaccggggctccccggggctcca
ggcagtccaggtgccccaggttggaaaggacagcgaggggacatggggcctctgggacct
gctggaatgaagggcctccctggagtcccgggacggccaggggcagatggaaccccaggt
cttccaggggtcccaggccccactggagatgatgggctgcctggtcttccaggcccaaag
ggaccccagggtctgcctggcttcctgggttttccgggagagagaggaaaacctggtcag
gatggacaccctggcagaaagggagaacatggagagaagggttggcctggctccctggga
gaccgaggactgaaaggtgtcaaaggagcaagaggacccccgggatatgaaggagaaatg
gatattatttccaagaagggggaaacaggagaacctggaccttctggggatggtggattc
ccaggagaaaatggtgataaaggtcatcctgggatgcaaggaaggagaggagagccagga
agctatggaccacctggattacaccctggagagcccggaagaaatgggcagccagggctt
cctggacccccaggccctccaggctcacctgggctgagagggatcattggttttccagga
tttcctggtgaccagggtgagccaggttctccagggtgcccgggaccttcaggaattgat
ggtacaagaggacctaaaggatacaaaggggaatctgcaagtcagtttggcctacctggt
ccaaagggtgagccaggtagccccggatatccaggacagttgggagcatctggagagcag
ggcttgcctggtgctcaaggtcctggaggaccacccggaaggccaggacctcctggcttc
tctggaccaacaggatgtccaggtaatccaggggagcctgggctgcagggacccccagga
gaagtgggggatcctggaccaagaggcatcgtgggggacccaggggcaccaggtcttcca
ggaataaaaggtccctctgggtcgcccggcctgaacggcctgcatggtttgaagggtcag
aaaggcagcaaaggcgcttcaggttcgcatgaaatgggccccccaggtccagtgggaatg
cccggccctaaaggggagacaggagaccctgggaacccaggaatttctcctccgggacct
ttcggagaaagaggtcccccaggtcccccaggacccccagggagagctggatcgcctggt
cctccaggtgccccaggaaaagctcttaagggtgacattccagacccgggtctgcctgga
gatcagggacctcctggccccgatggtccaagaggagtacctgggcctccaggaccacct
gggagtgtcgaccttctgaaaggggaaccaggagactgtggtctgccggggcctccaggt
ctcccgggcccaccaggccctccaggacacaaaggcttcccaggatgtgatggaaaacac
ggccagaaaggaccaatgggattcccagggccacaggggccacctggaagtcctgggcca
cctggagacaaaggtttacctggacctccaggcagacgagggcctttgggtcctccgggt
aagcttctaatgcctaatcatctccacctagcctacatggagtgtttttttaaaaatatt
tactatgagggttatctttcagaaagtaattattctgaaattatcagtaaattctaa
DBGET
integrated database retrieval system
