KEGG   Ovis aries (sheep): 101119155
Entry
101119155         CDS       T03117                                 
Symbol
SYMPK
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
oas  Ovis aries (sheep)
Pathway
oas03015  mRNA surveillance pathway
oas04530  Tight junction
Brite
KEGG Orthology (KO) [BR:oas00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101119155 (SYMPK)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    101119155 (SYMPK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oas03021]
    101119155 (SYMPK)
   03019 Messenger RNA biogenesis [BR:oas03019]
    101119155 (SYMPK)
Transcription machinery [BR:oas03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     101119155 (SYMPK)
Messenger RNA biogenesis [BR:oas03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     101119155 (SYMPK)
    U7-dependent histone pre-mRNA processing factors
     101119155 (SYMPK)
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N PDS5 Cnd1
Other DBs
NCBI-GeneID: 101119155
NCBI-ProteinID: XP_027834307
LinkDB
Position
14:complement(53142301..53175451)
AA seq 1274 aa
MAASSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLNVLKHPASLEFQAQITTLLVDLGTPQVEIARNMPSSKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLPAQGQAISVVGSLSSMSSLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGVKGALDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSAKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMAILEASGKQEPEAKEAPAGPLEEDDLEPLALAPPPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGLGAPSSSSSSSSSSVRPGPPQSEEAIDFREEGPECET
PAIFISMDDDSGLTEAALLDSSLEGPLPKETAAGGLLSKEERSPQPLTAAGEDTMQTPSP
ATEEAGEPETKGNS
NT seq 3825 nt   +upstreamnt  +downstreamnt
atggcagccagcagtggggacagcgtcacacgccggagtgtggcatcacagttcttcact
caagaggaggggcctggcatcgatggcatgaccacatcagagagagtggtagatctcctg
aaccaggcggcactgatcaccaatgactcaaagatcacagtgctcaaacaggtgcaggaa
ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgctttc
caggcagacaagtccatcgaagtgcgcaagtttgtcatcggcttcatcgaggaggcttgc
aagcgagacattgagctgctgctgaaactgatcgcgaacctcaacatgctgttgagggat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtgatcagtgagctccaggaggcctgctgggatatg
gtgtcggccatggctggggacatcatcctgctgctggactctgacaacgacggcatccgt
acccatgccatcaagttcgtggagggcctcatcgtcaccctctcgccccgcatggccgac
tcggaggtgccccgacgccaggagcacgacatcagcctggaccgcatccctcgtgaccac
ccctacatccagtacaatgtgctgtgggaagaaggcaaggcagccttggagcagctgctc
aagttcatggtgcaccctgctatctcctccatcaacctgaccacagccctgggctccctg
gccaatattgcccgccagaggcccatgttcatgtcggaggtgattcaggcctatgaaacc
ctccacgccaatctgcccccaacgctggccaaatctcaggtgagcagcgtgcgtaagaac
ctcaagttgcacctgttgaatgtgctgaagcacccagcgtccttggagttccaggctcag
atcaccaccctgctggtggacctgggcacgcctcaggtggagatcgcccgcaacatgccc
agcagcaaggatgcccgcaagcggccccgagacgactcggattccacgctcaagaagatg
aagctggagcccaacctgggggaagacgatgaggacaaggacttggagccaggcccctcg
ggaacctcgaaggcctcagcccagatctcaggccagtcagacacagacatcacggccgaa
ttcctccagcctctgctgacacccgacaatgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgcccgcctccttccaagcgatctacaccccagtggagtcagca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacgcagatgacggccgca
ggactggggccaggcgtggagcagaccaagcagtgcaaggaggagcccaaggaggagaag
gtggtgaagccagagagcgtcctgatcaagcggcgcctgcccgcccagggccaggccatc
tcggtagtgggctccctgagctccatgtcctccctggaggaggaggcaccccaggccaag
aggaggccggagcccattatccccgtcacgcagccccggctggcgggcgctggtgggcgc
aagaaaatcttccgcctaagtgacgtgctgaagcccctgacggacgcgcaggttgaggcc
atgaagctaggcgctgtgaagcggatcctgcgggcggagaaggctgtggcctgcagcggg
gccgcccaggtgcgcataaagatcctggccagcctggtgacgcagttcgactcgggcctg
aaggccgaggtcctgtccttcatcctggaggacgtccgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctacctcgcagctggcgtcaagggcgccctggac
aagtacgaggactgcctcatccgcctgctctccggcctgcaggagaagccggaccagaag
gacgggatcttcaccaaggttgtgctggaggcgccgctgatcaccgagagtgccctggag
gtgattcgcaagtactgcgaggacgagagtcgcacctacctgggcatgtccactctccga
gacctgatcttcaagcgcccatcccgccagttccagtacctgcatgtcctgctagacctc
agctcccacgagaaggacaaggtgcgttcccaggccttgctgttcatcaagcgcatgtac
gaaaaggaacagctgcgagagtacgtggagaagtttgccctcaactacctacagctcttg
gtccaccccaacccgccgtcggtgctgtttggagccgacaaggacacagaggtggccgca
ccctggaccgaggagacggtgaagcagtgcctgtacctctacctggctctcctacctcag
aaccacaagctgatccacgagctggcggccgtgtacacggaggccatcgctgacatcaag
aggacagtgctgagggtcattgaacagccgatccgggggatgggcatgaactcgccagag
ctgctcctgctggtggagaactgtcccaagggggcggagacactggtcacacgctgtctg
cacagcctcacagacaaagtgcccccgtccccggagctggtgaagcgggtcagggatctc
taccacaagcgactgccagacgtccggttcctcatcccagtgctcaatgggctggagaag
aaggaagtgatccaggccctgccaaagctcatcaagctcaaccccatcgtggtgaaagaa
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcagccctgtcccccctg
aaccctggagagctgctcatcgccttacacaacattgactcagcaaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcagaggtg
ctggccgtggtgatgcagcaactgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccctgactatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccggctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcagcgcaccaagccccagagcttccaggtcatcctgcagctcccaccccagcag
ctgggggccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtgcgc
tccttcaccccccaccagcaagcacacatccccaactccatcatggccatcctggaggcc
agcggcaagcaggagccagaggctaaggaagcacccgccgggcccctggaagaggatgac
ttagagcctctggccctggcaccacctccggccccccgaccccctcaagatctcatcggc
ctgcggctggcccaggagaaggccttaaagcggcaactggaggaagaacagaagctgaag
cctgggggactgggagccccctcctcgtcctcgtcctcgtcctcttcctcggtgcggcca
ggccccccccagtcggaggaagccattgatttccgggaggaggggcctgagtgtgagacc
ccggccatcttcatcagcatggacgatgactcggggctgactgaggccgcactgctggac
tctagtcttgagggacccctacctaaggaaactgcagcaggtggattgctttcaaaggag
gagcggagcccccagcccctcacagctgctggagaagacacaatgcagacccccagccct
gccactgaggaagcgggcgaaccggaaaccaaggggaatagctga

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