Ovis aries (sheep): 101119155
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Entry
101119155 CDS
T03117
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
oas
Ovis aries (sheep)
Pathway
oas03015
mRNA surveillance pathway
oas04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101119155 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101119155 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oas03021
]
101119155 (SYMPK)
03019 Messenger RNA biogenesis [BR:
oas03019
]
101119155 (SYMPK)
Transcription machinery [BR:
oas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101119155 (SYMPK)
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101119155 (SYMPK)
U7-dependent histone pre-mRNA processing factors
101119155 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
101119155
NCBI-ProteinID:
XP_027834307
LinkDB
All DBs
Position
14:complement(53142301..53175451)
Genome browser
AA seq
1274 aa
AA seq
DB search
MAASSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLNVLKHPASLEFQAQITTLLVDLGTPQVEIARNMPSSKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLPAQGQAISVVGSLSSMSSLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGVKGALDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSAKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMAILEASGKQEPEAKEAPAGPLEEDDLEPLALAPPPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGLGAPSSSSSSSSSSVRPGPPQSEEAIDFREEGPECET
PAIFISMDDDSGLTEAALLDSSLEGPLPKETAAGGLLSKEERSPQPLTAAGEDTMQTPSP
ATEEAGEPETKGNS
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagcagtggggacagcgtcacacgccggagtgtggcatcacagttcttcact
caagaggaggggcctggcatcgatggcatgaccacatcagagagagtggtagatctcctg
aaccaggcggcactgatcaccaatgactcaaagatcacagtgctcaaacaggtgcaggaa
ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgctttc
caggcagacaagtccatcgaagtgcgcaagtttgtcatcggcttcatcgaggaggcttgc
aagcgagacattgagctgctgctgaaactgatcgcgaacctcaacatgctgttgagggat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtgatcagtgagctccaggaggcctgctgggatatg
gtgtcggccatggctggggacatcatcctgctgctggactctgacaacgacggcatccgt
acccatgccatcaagttcgtggagggcctcatcgtcaccctctcgccccgcatggccgac
tcggaggtgccccgacgccaggagcacgacatcagcctggaccgcatccctcgtgaccac
ccctacatccagtacaatgtgctgtgggaagaaggcaaggcagccttggagcagctgctc
aagttcatggtgcaccctgctatctcctccatcaacctgaccacagccctgggctccctg
gccaatattgcccgccagaggcccatgttcatgtcggaggtgattcaggcctatgaaacc
ctccacgccaatctgcccccaacgctggccaaatctcaggtgagcagcgtgcgtaagaac
ctcaagttgcacctgttgaatgtgctgaagcacccagcgtccttggagttccaggctcag
atcaccaccctgctggtggacctgggcacgcctcaggtggagatcgcccgcaacatgccc
agcagcaaggatgcccgcaagcggccccgagacgactcggattccacgctcaagaagatg
aagctggagcccaacctgggggaagacgatgaggacaaggacttggagccaggcccctcg
ggaacctcgaaggcctcagcccagatctcaggccagtcagacacagacatcacggccgaa
ttcctccagcctctgctgacacccgacaatgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgcccgcctccttccaagcgatctacaccccagtggagtcagca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacgcagatgacggccgca
ggactggggccaggcgtggagcagaccaagcagtgcaaggaggagcccaaggaggagaag
gtggtgaagccagagagcgtcctgatcaagcggcgcctgcccgcccagggccaggccatc
tcggtagtgggctccctgagctccatgtcctccctggaggaggaggcaccccaggccaag
aggaggccggagcccattatccccgtcacgcagccccggctggcgggcgctggtgggcgc
aagaaaatcttccgcctaagtgacgtgctgaagcccctgacggacgcgcaggttgaggcc
atgaagctaggcgctgtgaagcggatcctgcgggcggagaaggctgtggcctgcagcggg
gccgcccaggtgcgcataaagatcctggccagcctggtgacgcagttcgactcgggcctg
aaggccgaggtcctgtccttcatcctggaggacgtccgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctacctcgcagctggcgtcaagggcgccctggac
aagtacgaggactgcctcatccgcctgctctccggcctgcaggagaagccggaccagaag
gacgggatcttcaccaaggttgtgctggaggcgccgctgatcaccgagagtgccctggag
gtgattcgcaagtactgcgaggacgagagtcgcacctacctgggcatgtccactctccga
gacctgatcttcaagcgcccatcccgccagttccagtacctgcatgtcctgctagacctc
agctcccacgagaaggacaaggtgcgttcccaggccttgctgttcatcaagcgcatgtac
gaaaaggaacagctgcgagagtacgtggagaagtttgccctcaactacctacagctcttg
gtccaccccaacccgccgtcggtgctgtttggagccgacaaggacacagaggtggccgca
ccctggaccgaggagacggtgaagcagtgcctgtacctctacctggctctcctacctcag
aaccacaagctgatccacgagctggcggccgtgtacacggaggccatcgctgacatcaag
aggacagtgctgagggtcattgaacagccgatccgggggatgggcatgaactcgccagag
ctgctcctgctggtggagaactgtcccaagggggcggagacactggtcacacgctgtctg
cacagcctcacagacaaagtgcccccgtccccggagctggtgaagcgggtcagggatctc
taccacaagcgactgccagacgtccggttcctcatcccagtgctcaatgggctggagaag
aaggaagtgatccaggccctgccaaagctcatcaagctcaaccccatcgtggtgaaagaa
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcagccctgtcccccctg
aaccctggagagctgctcatcgccttacacaacattgactcagcaaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcagaggtg
ctggccgtggtgatgcagcaactgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccctgactatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccggctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcagcgcaccaagccccagagcttccaggtcatcctgcagctcccaccccagcag
ctgggggccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtgcgc
tccttcaccccccaccagcaagcacacatccccaactccatcatggccatcctggaggcc
agcggcaagcaggagccagaggctaaggaagcacccgccgggcccctggaagaggatgac
ttagagcctctggccctggcaccacctccggccccccgaccccctcaagatctcatcggc
ctgcggctggcccaggagaaggccttaaagcggcaactggaggaagaacagaagctgaag
cctgggggactgggagccccctcctcgtcctcgtcctcgtcctcttcctcggtgcggcca
ggccccccccagtcggaggaagccattgatttccgggaggaggggcctgagtgtgagacc
ccggccatcttcatcagcatggacgatgactcggggctgactgaggccgcactgctggac
tctagtcttgagggacccctacctaaggaaactgcagcaggtggattgctttcaaaggag
gagcggagcccccagcccctcacagctgctggagaagacacaatgcagacccccagccct
gccactgaggaagcgggcgaaccggaaaccaaggggaatagctga
DBGET
integrated database retrieval system