Ovis aries (sheep): 101120323
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Entry
101120323 CDS
T03117
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
oas
Ovis aries (sheep)
Pathway
oas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101120323 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
101120323 (CNOT6)
Enzymes [BR:
oas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
101120323 (CNOT6)
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101120323 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101120323 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
101120323
NCBI-ProteinID:
XP_014951209
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Position
5:complement(418893..511750)
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AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWVELEISGKVRSLSSSLWSLTHLTALYLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYLEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEVSSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLQSNVLGEFGTIPLVLCADLNSLPDSG
VVEYLSTGEVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctcggaggatgtatacaattatgtcctcc
gaggaagcagcaaatggaaagaaatctcattgggtggagcttgaaataagtggaaaagta
agaagcttaagctcatctttgtggtcactaactcacttgacagctttgtatctaagtgac
aattccctgtcccgcattccttcagacattgccaagcttcacaatctggtgtatctggac
ctgtcctctaataaaatccgaagtttaccggcagaactcggaaacatggtatcactcagg
gaactccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccacttacccaggacatattgaacctctat
ctggagccagatggaacaagaaggctactgaactatttgcttgataatttggcaggtact
gcaaaaagaatttcaacagaacagccacctccaagatcttggattatgttacaagaacca
gacagaacacggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatatggctactgtccatcatgggcactaaattgggactacagg
aaaaaggccattattcaagaaatcttgagttgcaatgctgatatcataagtcttcaggaa
gttgaaacagaacagtattacagtttttttctggtagaactgaaagaacgtggctataat
ggattctttagtcctaaatctagagctaggacaatgtcagagcaagaaagaaaacatgtt
gatggctgtgcaatattttttaaaacagaaaaatttactttggttcagaaacacactgtt
gaatttaatcaactagcaatggcaaattcagaagggtctgaagccatgctgaacagagtc
atgacgaaagataacataggagtggctgtactgctagagcttcgaaaggaactgattgaa
gtatcatctggaaagccacatcttggaacagaaaagcagcttattctcgtggctaatgct
catatgcactgggaccctgaatactccgatgtgaagttggttcaaacgatgatgttcctc
tcagaagtgaagaatattattgataaagcctcgagaagtctccagtccaatgtattagga
gaatttggaactattccactagtgttatgtgcagatcttaattctttgccggactctggt
gttgtagaatatttgagcactggtgaagtagaaacaaatcataaagactttaaggaactg
agatacaatgaaagtcttacgaacttcagctgtaatgggaaaaatgggacaaccaatgga
aggatcactcatggcttcaagttaaagagtgcctatgagagtggcctgatgccttacacc
aactacacatttgattttaagggtataattgactacatcttctattctaaacctcagctg
aacactttaggcattctgggacctctggaccaccactggctagttgagaacaatatcagc
ggctgcccacacccactcatcccctctgaccacttctcactttttgcacaactggagctc
ttactgcctttcctgccccaggttaatggcattcaccttcctggcaggaggtag
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