Ovis aries (sheep): 101121404
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Entry
101121404 CDS
T03117
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
oas
Ovis aries (sheep)
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oas03036
]
101121404 (SHOC1)
Chromosome and associated proteins [BR:
oas03036
]
Eukaryotic type
Meiosis-specific proteins
Others
101121404 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
101121404
NCBI-ProteinID:
XP_042100754
LinkDB
All DBs
Position
2:11754208..11844796
Genome browser
AA seq
1527 aa
AA seq
DB search
MICLFSPLSWILEASQFLSRYSPTTMRWITDICNASVVRKKLCKDTLLLRIPSCLYQDDN
YPASVIDNKFRRPWTRVSAVSIWGKTDISVLDQWKASLTVDEFLEKRTVTGMVTQLNCEF
DEIVPSSNPNSQTEVEEASLHTHKDYNEFFTLVSCLEKCPSLQAQDLSIDEEIIFVNYLM
AYKSQLPTLHTLLSRLKLYLVKDPLPDFKAQISTEAKFFRECFSLQGDVKCFVKEDFYMD
KEDFCQEKLKDTVGLNEASSTLLECELLVPISHKQEVDIPSLSELKESLNLTPEIINYAD
ENENLSKTDLTIKHGVDLEDIKCSSTEILAIQNQYEPEYRQPDELGMPLTRLDLTNHHSS
VNSLCAELQTFPSSPVCKINLLTAEESANKYHMLCQLESYQSSLNSSFIRVPRIEEPNNQ
YSLTDLKKIFSVEDEKLVVNPVNAEWWKEARLNLPETLEPLSTYLCHNNLSSDDTKLETF
LPTNVPQVEPRLEHEDCSSPLIRINEQSTNDHSSPPRKTPSPTKEVSDLHLSDEYVSVEI
PRKEEKPKNDLELGYGIIQNKGNKDHLELDSTVPSTESSSSSKIEKASFKHGKKWENNLD
LLNDFIMLRNKYPTCTSKTEVTDNDGKDELQNEELSFALQEESPIVCNNKTLEKTNQERR
ADNVIEIPASDSQCQAYCLLEAAASPILEKLVCLCTLPAANWKFATIIFDQTRFLLKEQE
KIISDAVHQGKNDEREMTFKYAALLHLLVTIRDVLLTCNLDTALGYLSNAKDIYKSVFGS
CLYDIWRQLEIVQFIRGKKPETNYKIRELQCQILNWMQSEQQIKVLIIIRMDSDGEKHLL
IKILNKIEGLTLIVLHSNKRKDFLESEGVLNSTSFCVVVPNQYIGADFPWSNFSFVVEYN
FVENSCWTEHCEKLNIPYMALKVILPDTVLKRSSLLDSFGGFLLEIQIPYMFFASEGLLN
TPEILQLLESNYNITLVERCCSESLKLFGGTEHYVVMTIDEHTAVILQDLEELNCEKASD
NIIMRLMALSFQYSYCWIILYAKKPLNSEYHLTEKTLHHLALIYAALVSSGLKSEELDVK
LIIAPGVEETALMIRQIADHNLMTSKRDPHEWLDKSWLKVAPSKEEMYLLDFPSVTPLVA
QLMLNKGPSLNWILLATLCQLQELLPEVPEKVLKHFCGITSLFKISPSITKSPQISSPRE
NRDQTRTFTSQSSASGSSDSVIQEHNNYQYSDLAETVHEDTNSTSNYTSSLMEIKEMPGI
LPSVSSCNQTSYWKESSCNPNLVQNNSVLTNTEARNVSGNSLLNQNDSESDVFSLGLTEM
NYETIISPIDTQKTVTPHVISYQKKGTHEKKGPIKKELSAPVFLLEGSQPPLCWNFKRNV
WEQQNHSFNLQSGAQQSTCDKWYSQKDNLFINQQKYQSDELEGFICESSNAGTKKTFWKE
SPSVPSLDLSCASDSNVNQKEFNSLYFYQRAGKCLGQKRHSESSSNSGDNNSLTDFTSLQ
LPQFKKQRLVYEKVPGRLDGQTRLRFF
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgatttgcttgttttcccccttgtcttggattttagaagcaagccagtttctctctcgc
tattcacctaccactatgagatggattacagatatctgtaatgcaagtgtagttagaaag
aagttgtgcaaagatactttattgcttcggatcccttcatgtttatatcaagatgacaat
tatcctgcaagtgttattgataataagtttaggaggccatggacaagagtttcagctgtt
tcaatctggggaaagacagatatctcagtcttggatcaatggaaagcaagtctcactgtg
gacgagttccttgagaaaagaacagttacaggaatggtgacccagcttaactgtgaattt
gatgaaattgttccaagttcaaacccaaactcccaaactgaagtagaggaagccagctta
catacccataaggattacaatgaattctttactcttgtcagctgcttagaaaaatgtcca
tcacttcaagcacaagatttgtctattgatgaagaaataatttttgtaaattatttgatg
gcctataaaagtcagctaccaactttgcacactctgttgagtaggctaaaactatattta
gtaaaggatcccttgccagatttcaaagcacagatctccacagaagctaaatttttcagg
gagtgtttctctcttcaaggagatgtaaaatgttttgtgaaagaagatttttacatggat
aaagaggacttttgtcaggagaaactgaaagatacagtaggtttaaatgaagcttcatca
actttgcttgaatgtgaattgttagtacctataagccacaaacaagaagttgatattcca
tcactctcagaactgaaggagtcattaaacttaacgccagaaataataaattatgcagat
gaaaatgaaaacctttccaaaacagatcttactatcaagcatggagttgaccttgaggat
ataaaatgcagctccacggaaattttggccattcaaaatcaatatgaaccagagtacagg
caaccagatgagttaggaatgccattaactcgtctagacctaacaaaccaccattcttca
gtgaattcattatgtgcagaacttcagacatttccatcctctcctgtttgtaaaattaat
ttgcttactgctgaagaatcagctaacaaataccatatgctatgccaattagaaagctac
caaagctctctgaactcatcttttattagagtgccaagaatcgaagagcccaacaatcaa
tattcactcacagatttgaaaaagatattttctgttgaagatgaaaaacttgtggttaat
cctgtaaatgcagagtggtggaaagaagcaagactaaatctgccagaaactttggaacct
ctaagtacatatttgtgtcataataatttatcttccgatgatactaaattggagacattt
ttacctacaaatgtgcctcaagtagaaccacggttagaacatgaagattgttcctctcct
cttatacgtattaatgagcaatctacaaatgatcattcatcacctccacgaaagactcca
tctccaactaaagaagtatcagatttgcatctttctgatgaatatgtctctgttgaaata
ccaagaaaagaagaaaaaccaaagaatgacctagaactaggttatggaataatccaaaat
aaaggaaataaagatcacttggaacttgacagcacagtaccatctactgaatcatcttcc
tcttcaaaaattgaaaaagcatcttttaaacatggtaaaaaatgggagaataatttggac
cttttgaacgactttattatgctgcgaaataagtatccgacttgtacctcaaagactgaa
gtcacagacaatgatggaaaagatgaacttcaaaacgaagaactttcttttgctcttcaa
gaagaaagccctattgtttgtaataataaaaccctagagaaaacaaatcaggaaaggaga
gcagataatgtcatcgaaattccagcatcagatagccagtgccaagcatattgtctcctg
gaagcagcagcttctcctatcttagaaaaacttgtatgcctctgtactcttcctgctgct
aactggaaatttgccactatcatttttgaccaaacaaggttcctcttgaaagaacaagaa
aaaataataagtgatgctgttcatcaaggtaaaaatgatgaaagagaaatgacattcaag
tatgctgctctcttacaccttttggtaacaattagagatgtccttttaacctgtaacttg
gacacagcattgggatatttgtcaaatgcaaaagatatctacaaaagtgtttttggttcc
tgtttgtatgacatttggcgacaactggagatagtacagtttataagggggaaaaagcct
gaaaccaactataagataagagaattgcaatgtcagatactaaattggatgcaaagtgaa
cagcaaatcaaggtgctgattataataagaatggattcagatggagaaaaacatttactc
attaaaatccttaacaaaatagaaggtttgacactgattgtcttacattcaaacaaaaga
aaagactttctggaatctgaaggtgttttaaacagtacaagtttctgtgtagtggtaccc
aatcaatacattggagcagatttcccctggagtaatttctcatttgtggtggaatacaat
tttgtagaaaactcttgttggactgaacattgtgaaaaattgaatattccttacatggcc
ttaaaagtgattcttccagatacagttttaaagagaagcagcttgcttgatagttttggt
ggttttctcttggaaattcagattccatatatgttttttgcatctgaaggacttcttaat
actccagaaatcctacagttgttagaatccaactataacatcacactagtggagagatgc
tgcagtgagtcactgaaactctttggaggtacagagcattatgtggtaatgacaattgat
gagcacactgctgtaattttgcaggacctagaagaattaaactgtgagaaggcatcagac
aatatcattatgagactgatggcattatcattccagtacagctattgttggataatttta
tatgccaaaaagccattaaactcagagtaccatcttacagaaaagactcttcatcaccta
gcactgatttatgcagctttggtttcatctgggctaaaatcagaagaactggatgtaaag
cttataattgccccaggagtggaagagactgcactgatgattcgacaaattgctgaccac
aatttgatgacctcgaaaagagatcctcacgaatggttggataaatcctggcttaaagtt
gcaccatctaaggaagaaatgtacttacttgattttccaagtgttactccattggtggct
cagctcatgttaaataaaggaccttcactgaactggatattgttagcaactctttgtcaa
cttcaggaactcctgcctgaagttccagaaaaagtgttaaagcatttttgtggcatcact
tccttattcaagattagtccttccataacaaaatcacctcaaatttcatcacctcgggaa
aacagggatcagactagaacctttacttctcagagttcagcttctggctcttcagattct
gtcattcaagaacataataactatcaatattcagacttagcagagacagtacatgaagac
accaacagcacttcaaattatacctcttcccttatggaaataaaagaaatgccaggtatt
ttaccatctgtgagttcttgcaatcagaccagctattggaaagagtctagttgtaaccct
aacttggtacagaataattctgttctgactaatacagaagcaaggaatgtgtctggtaat
tctcttctgaaccagaatgattcagagtcagatgtcttttctttgggtctaacagaaatg
aattatgaaactataatatcaccaatcgacactcagaagacagtcacccctcacgttata
agttatcagaaaaagggaacacatgaaaaaaaaggacctataaaaaaagaattgtcagct
cctgtctttttacttgagggttctcaacctcctctttgttggaactttaagagaaacgta
tgggaacaacagaatcattcattcaatttacagagtggtgcacagcagagtacatgtgac
aaatggtactctcagaaagataatttattcattaatcagcaaaaatatcagtcggatgag
ttagaaggcttcatctgtgaaagttcaaatgctgggactaaaaagactttctggaaagaa
tcaccatctgtccccagtttggatttatcctgtgcttctgattctaatgtaaatcaaaaa
gaattcaacagtctttatttctaccaaagagctggaaaatgtttaggacagaaaaggcac
tctgagtcttcatctaactcaggagacaacaactcattaacagatttcacgtccttacaa
ctaccgcaattcaaaaaacaacgtcttgtgtatgaaaaagtccctggtagacttgacgga
caaactcgtctgaggtttttttga
DBGET
integrated database retrieval system
