Ovis aries (sheep): 101121808
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Entry
101121808 CDS
T03117
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
oas
Ovis aries (sheep)
Pathway
oas03082
ATP-dependent chromatin remodeling
oas04714
Thermogenesis
oas05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101121808 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101121808 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101121808 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oas03021
]
101121808 (SMARCC1)
03036 Chromosome and associated proteins [BR:
oas03036
]
101121808 (SMARCC1)
Transcription machinery [BR:
oas03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101121808 (SMARCC1)
Chromosome and associated proteins [BR:
oas03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101121808 (SMARCC1)
PBAF complex
101121808 (SMARCC1)
GBAF(ncBAF) complex
101121808 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
BRCT_2
Chromo
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
101121808
NCBI-ProteinID:
XP_027813508
LinkDB
All DBs
Position
19:51971686..52095415
Genome browser
AA seq
1105 aa
AA seq
DB search
MAAAAGGGGLGTTTGAAGAGGAAAATGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHTDAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLARPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHVYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDPGKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQIPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDTDAQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKEAEENKE
LTDSCKERESDVGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGPNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMMPGQPMPGRMMPTVAASIHPPGSGPTPPGMPPIPGNILGPRVPLTAPNGMYPPPPQQ
QPPPPAPADGGPPPPAPGPPASAAP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcggcggagggctggggacgaccaccggcgccgcgggcgcagga
ggcgcggcggcggccacgggcctggccgtttatcggcggaaggacgggggcccggcgagc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcacacggatgctcctacgaataaaactctggctgggctg
gtggtacagcttcttcagttccaagaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaagctcccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaaatacaaaaatgaacagggatggcggaggtttgatctgcag
aatccatcccgaatggatcgtaatgttgaaatgtttatgaacattgaaaaaacattggtt
cagagcaattgtctggccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatataatcaaacgacatcagggaacatttactgatgagaagtca
aaagcttcccaccacgtttatccatatccttcctcacaagaggatgaagagtggttgaga
cctgtgatgagaaaagacaagcaggtgttggtgcactgggggttttaccctgacagctat
gatacttgggtccatagtaatgatgttgatgcagaaattgaagatccaccgattccagaa
aaaccatggaaggttcatgcaaaatggattttggacactgatgttttcaatgaatggatg
aatgaggaggattatgaggtggatgagaacaggaagcccgtgagttttcgtcagcgaatt
tcaacaaagaatgaagagccagtcagaagtccagagagaagagatagaaaagcatcagct
aatgctcgaaaaaggaaacattcaccttcccctccgcccccgacacccacagaatcccgg
aagaagagtgggaagaaaggccaagctagtctttatgggaagcggagaagtcagaaagag
gaagatgagcaagaagatcttaccaaggacatggaagacccaacacctgtacccaacata
gaggaagtggttcttccaaaaaatgtaaacccaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtggcagatctagatgagcaggatgaagaaacagtcacgacaggagga
aaggaagatgaagatcctggcaaaggtgatcagagtagatccgttgaccctggtgaagat
aatgtgactgagcagaccaatcacattattattcctagctatgcatcgtggtttgattat
aactgtattcatgtgattgaacggcgtgctcttcctgagtttttcaatggaaaaaacaaa
tccaagaccccagagatatacttggcatatcgaaatttcatgattgacacataccgccta
aatccccaagaatatttaaccagcactgcttgtcggaggaacttaactggagatgtgtgt
gctgtgatgagggttcatgcctttttagaacagtgggggcttgttaattaccaagtggat
ccagaaagtcgacccatggcaatggggcctcctccaactcctcatttcaatgtgttagct
gataccccttcggggcttgttcctctacatcttcgatcacctcagattcctgctgctcag
cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaacttcggt
cttcgtactgacatctactccaagaaaaccttagcaaagagtaaaggtgctagtgctgga
agagaatggactgaacaggagactctgctactcttggaggctctggagatgtataaagat
gattggaacaaagtgtcagagcacgttggaagtcgcactcaggatgaatgcatccttcac
ttcttgaggcttcccattgaggacccataccttgagaattctgatgcttccctggggccc
ctggcctaccagcctgtccccttcagtcagtcgggaaacccagtcatgagcactgttgct
tttttggcatctgtggtggatcctcgtgtggcatctgctgcagccaaagcagctttggag
gagttttctcgggtccgggaggaggtgcccctggagttggtggaggctcatgtcaagaaa
gttcaagaagcagcccgagcctccgggaaggtggatcccacctacggcctggagagtagc
tgcattgcaggcacggggccagatgagccagagaagctggaaggagctgaagaggaaaaa
atggaaacagatactgatgctcagcagcctgaaaaggcagaaaacaagggggaaaatgaa
acggatgaaggtgataaagcacaagatggagaaaatgaaaaaaacagtgaaaaggaacag
gatagtgaagttagcgaggataccaaatcagaagaaaaggaggctgaagagaacaaggaa
ctcactgattcttgtaaagaaagagaaagtgatgttgggaagaagaaagtagaacatgaa
atttctgaaggaaacgtagccacagccgcagcagctgctcttgcctcagctgcaacgaaa
gccaagcacctggctgccgtggaagagagaaagatcaagtctctggtagctcttctggtt
gagacacaaatgaagaaactggagattaaacttagacattttgaagaactagaaactatc
atggacagagagaaagaagctttagaacaacagaggcagcagttgcttacggagcgccag
aacttccacatggagcagctgaaatacgctgagttgcgagcccgacagcaaatggaacag
cagcagcatgggccgaaccctcaacaggcacaccagcactcaggaggacccggcctggca
ccgctgggagcagcaggacatcccggcatgatgcctcatcagcagccccctccctaccct
ctgatgcaccaccagatgccgccgcctcatccaccccagccaggtcagataccaggccca
ggttccatgatgcctgggcagcccatgccaggccgcatgatgcccaccgttgcagccagc
atccacccccctgggagtggccccacccctcctggtatgcctccaatcccaggaaacatc
ttaggaccccgggtacccctcacggcacctaacggcatgtatccccctccgccgcagcag
cagccaccacctccagcacctgcggacggaggccctccacctcccgctcctggcccacca
gcctcagctgcaccgtag
DBGET
integrated database retrieval system
