Ovis aries (sheep): 101123035
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Entry
101123035 CDS
T03117
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
oas
Ovis aries (sheep)
Pathway
oas03440
Homologous recombination
oas03450
Non-homologous end-joining
oas04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101123035 (RAD50)
03450 Non-homologous end-joining
101123035 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
101123035 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oas03032
]
101123035 (RAD50)
03400 DNA repair and recombination proteins [BR:
oas03400
]
101123035 (RAD50)
DNA replication proteins [BR:
oas03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
101123035 (RAD50)
DNA repair and recombination proteins [BR:
oas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
101123035 (RAD50)
BRCA1-C complex
101123035 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
101123035 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
Crescentin
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101123035
NCBI-ProteinID:
XP_004008686
EnsemblRapid:
ENSOARG00020000231
LinkDB
All DBs
Position
5:complement(19549321..19807692)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSIQGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMLCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSREI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGS
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFHKLVRERQEKESETASQLLNDFTR
KEALKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELKNVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVETLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTAARTQMEM
LNKDKADKDEQIRKIKYRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINIELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRGFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGAIIP
EEESAKVCLTDVTIMERLQMELKDVERKIAQQAAKLQGLDLDRSVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQLSPLETTLEKFQQEKEELVNKKNTSHKIAQDKINEIKEKVKNIHSYMKD
IENYIQDGKDDYKKQKETELNKVIAQISECEKHKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKKELREPQFRDAEEKYREMMIIMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIEQCSEIVTCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattcagggcgtgcggagttttggaatagaggataaa
gataaacaaattatcactttcttcagcccccttacaattttggttggacccaatggggcg
gggaaaacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgaccccaaggttgctcaagaaacagatgttagagcc
cagattcgtctacagtttcgtgatgtcaatggagaacttgtggctgtgcagagatctatg
ctttgtactcagaaaagcaaaaagacagaatttaaaaccttggaaggagtcattactaga
acaaagcatggtgaaaaggtcagtctcagctccaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaaatctgtgctaaataatgtcattttctgtcaccaagaa
gactcgaattggcctttaagtgaaggaaaggctttgaagcaaaagtttgatgagattttt
tcagcaacaaggtacataaaagccttggaaacacttcggcaggtacggcagacgcaaggt
cagaaagtaaaagaatgtcaaacagaattaaaatatctgaagcaaaacaaagaaaaagct
tgtgagattcgtgatcagattactagtaaggaagcccagttgacatcctcgagggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagactcgacaatgaaattaaagctttggaaagccgaaagaag
caaatggaaaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggtct
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agattggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttgtggaacagggccgtctacagctacaagcagatcgtcat
caggaacatatgcaagctagagattcattaattcagtctttggcaacacagctagaattg
gatggctttgagcttggaccattcagtgaaagacagataaaaaattttcacaagcttgtg
agagagaggcaggaaaaggaatcagaaactgccagccaactgttgaatgacttcacacga
aaagaggctctgaaacaaaaacaaatagatgagataagggataagaaaactggactggga
agaataattgagctaaagtcagaaatcctaactaagaagcagaatgagctgaaaaatgtg
aagtacgaattacagcagttggaaggctcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgagcgtgagctaagcaaggctgagaaaaacagcaatgtagaaactcta
aaaacagaagtaataagccttcaaaatgagaaagcagacctagacaggaccctgcgtaag
ttggaccaggagatggagcagctaaaccatcacacagcagcacgcacccagatggagatg
ctcaacaaagacaaagctgataaagatgaacaaatcagaaaaataaaatacaggcatagt
gatgaattaacttcgttgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaaccagactagggacagacttgccaagttgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaatattgagctaaaaaggaaggaagag
cagttgtccagctatgaagacaaactgtttgatgtctgtggcagccaggattttgaaagt
gacttggacagacttaaagaagaaattgaaaaatcgtcaaaacaacgagccatgttggct
ggagctacggcagtttattcccagttcattactcagttgacggatgaaaaccagtcatgt
tgccctgtctgtcagagaggttttcagacagaagctgaattacaagaagtcatcagtgat
ttgcagtccaagctgaggcttgctccagataagctcaagtcgacagaatcagagttaaag
aaaaaagaaaagcggcgtgatgaaatgctgggactagtgcccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtgaacagagac
atacagcgcctcaagaatgacatagaagaacaggaaacactcttgggtgcaattatacct
gaagaagaaagtgctaaagtgtgtctgacagatgttacaattatggagaggctccagatg
gaactaaaagatgttgaaagaaaaattgcacagcaagcagctaaactccaaggactagat
ttggatcgaagcgttcagcaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttctagtaagatagaattgaaccgtaagcttatacaggaccagcaggaacagatt
caacacctaaaaagcacagcaaatgaacttaaatcagaaaaacttcagatatccactaat
ttacaacgtcggcagcagctagaggaacagactgtggaattatccactgaagttcagtcc
ttatacagagaaataaaggatgctaaagagcagctaagccctttggaaacaacactggaa
aaatttcagcaggagaaagaagaattagtcaacaaaaaaaatacaagccacaaaatagca
caagataaaataaatgaaatcaaagagaaggtaaaaaatattcacagttacatgaaagac
attgagaattatattcaagatggaaaagatgactataagaagcaaaaagaaactgaactt
aataaagtaatagctcaaataagtgaatgtgagaaacacaaagaaaagattaataaggaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaaggtggctacaggat
aaccttactttaagaaaaagaaatgaagagctaaaagaagttgaagaagaaagaaaacaa
catttgaaggaaatgggtcaaatgcaggttttacaaatgaaaaatgaacatcagaagttg
gaagaaaaaatagacaatataaaaagaaatcacagtttggcaataggacgacagaaaggt
tatgaggaagaaattattcattttaagaaagaacttcgagaacctcaatttcgggatgct
gaggaaaagtacagggaaatgatgattattatgagaacaacagagcttgtgaacaaggat
ctggacatctattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gagtacatagaaattcgatcagatgccgatgaaaatgtatcagcttctgataaaaggagg
aattacaactaccgagtggtgatgctaaagggagacacagccttggatatgagagggcgt
tgcagcgccggacaaaaggtattagcctcactcatcattcgcctagccctggctgaaaca
ttctgcttaaactgtggcatccttgctttggacgagccaacgacaaatcttgaccgagaa
aacattgaatctcttgcacatgctctggttgagataataaaaagccgctcacaacagcgg
aacttccagcttctggtaatcactcatgatgaagattttgtggagctcctagggcgttcc
gaatatgtggagaaattctacaggattaagaagaacattgagcagtgctcagagattgtg
acatgcagtgttagttccctaggatcttatgttcattaa
DBGET
integrated database retrieval system
