Ovis aries (sheep): 101123086
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Entry
101123086 CDS
T03117
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
oas
Ovis aries (sheep)
Pathway
oas03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101123086 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oas04121
]
101123086 (SLX4)
03400 DNA repair and recombination proteins [BR:
oas03400
]
101123086 (SLX4)
Ubiquitin system [BR:
oas04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
101123086 (SLX4)
DNA repair and recombination proteins [BR:
oas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101123086 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
YlbE
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
101123086
NCBI-ProteinID:
XP_027817097
LinkDB
All DBs
Position
24:complement(3510616..3529628)
Genome browser
AA seq
1752 aa
AA seq
DB search
MMDESDDDFQELCASFFQRVKKNGPKEVSKEKKTQKASNSTQIRSKPKRTKPTASKSKTP
QGPTERKTCPGSQVPRTQKHRAPKRPETEPAPPENTEGGVHTSAVLQDSAWSTQTEATTD
SLSQPPPSCLTATAPSPSKPRAAELVLQRMQQFKRADPERLKHASEGCSLEAAPEENVPK
GPQDVMAVNGCGPGLPATESDTAVALALQQELGQEQASAPNDSLEETGLFFCQICQKNLS
AMNVTRRQQHVNRCLDEAEKALRFPTPQIPECPLCGKPFLTLKSRISHLKQCAVKMEVGP
RLLLQAVRLQGAQPAGTSGTPAPSLSNGAGCLKRKGATTKKEPRKRRKVPEPEAPSEDLL
VAMALSRSETEQQAVPAALRLGNAFAERTRLGAEKKTHKKKAPTSPPQLLVQDAETTGRQ
IQDRLAQLLSEEVEPSSTPPLPTSRILEEELARGSRVLRPPRGAQNLLWEASALTGARAL
ESFYTASLVPPLVPQWPAKGLTQEPMRLPQPPKLPELSVGAPASAPGTHPVSHSLRSPAP
SASQRERQALQDLLELAGEGLPASPCSRDLASSGGAAGMDLSLGGLPLTGFVLPAKEKYP
EEGGQASLALGLLVADFSAMVNNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLMQHVNSE
AFLAEEDGDLRRQRVLLRDVSTEAAQAFLHYLYAADTILTPQLAPDLRSLAQRFGVSELV
YLCEQVPFVMDAEGGQAKEQEDDADGRVETFRELLHLVWLGEEEGAEALLKPEGREEDRE
KVNEEEMEEIYEFAATQRKLLQGEKAPEPEEEADLLGEDGPVSGEILTSEQDKEQPENAE
QVESSGQGRDETPAKWGNTRQSTLLPPSDQALNGAERAEAPEGALAPPCSSSPAQGQPER
QESAPLCSADDDNVQQPFSSPQAGYSELSRVTSDWEEGNRTIQEREVEGFHPPAHQQAPP
SRSCFPPQPHQGQSPRQPRPHTRCPNDLSPPILQLQATASSMASQNLSLKPKKARRLPSS
REDPGQKDKECSSALGCRGKGVLIFPEKSPPMDLTRSGPGRRSSRPETSPRSMNREDEVI
LLLDSDEELELEQTKAKSFLNSPLEDKKVLEVSAKSSELFSIIDLDAEQEPPQSPPGSQA
LLPQEVEGRLGASTDDSTTDTSWLVPATPLAGGSCDCSSQTQITGLGARPPADPLALPKP
RALLENRDEPEATSKFSVIIPQMSSPHLGPAPPGGSDGRRQACSSPSSPRRRLLPRASPL
APRPILGGLADLPRQLPKCLPPVRSPAAQAPVSEVVEVEDSEDEQEAASQQASSSPLLDG
DPPLPAEDWCWHMEPLSPIPIDHLNLERTGPLSTSSPSNRAEGAPDSRDCHSPALLGTTP
IRGSYTGRRKSQEKSSGAGSPGSHQQSFLNSALWDDWNEEDQRSSEAAPLPQTPRTDGAQ
RSYKLQTPEGADRKKNLPPKVPITPMPRYSIMETPVLKKELDRFGVRPLPKRQMVLKLKE
IFQYTHQTLESDSENEGQSTQLPLEAPCSQTYTTQTAKASRAAGHTQLEAPPGRVPQRSK
GLAKTKGPQHHKQQPGGSISALSVSPAKEEPLDPGGDAQLPASQESTATSVDSGDSCCSS
QSSSCEFGAALESVGEEEAGEEVVSTSHAAVQAVATEEAVRRYIRSQPALYRKVLLYQPV
ELAELQAELKQQGIHVASGKLLDFLDTQCITFTTAATRKEKLGRKRRQPAGKKRGRARRP
APHSPVPAVSSL
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagtcagatgatgactttcaggaactctgtgccagctttttccaaagggtg
aaaaagaatggccccaaggaagtgtcaaaggaaaagaagacacaaaaggcctccaacagc
acccagataagaagcaaaccaaaaaggaccaaaccaactgcttctaagagcaagacccca
caaggccccactgagaggaaaacttgccctggcagccaggtcccgcggactcaaaagcac
agggcacccaagaggccagagactgaaccagctccccctgaaaacaccgagggaggtgta
cacacttctgctgtactccaggatagcgcatggagcacccagacagaggccaccacggac
agcctctcgcagccccctccttcctgtctgactgcaacggcgccaagtccctccaaaccc
agggcggcagagctggtgctccagcgaatgcagcagttcaagagagcagaccccgagcgc
ttaaaacatgcttctgaaggctgctcgctcgaggctgcacctgaagaaaatgtcccaaag
ggccctcaagatgtgatggcggtgaacgggtgtggacccgggctccccgccacagaaagc
gacactgcagtggccttggccctccagcaggagcttgggcaggaacaggcatccgcaccc
aacgacagcctggaggagacggggttgttcttttgccagatctgtcagaagaacctctca
gccatgaacgtgacacggaggcagcagcatgtgaaccggtgcttggatgaggctgaaaag
gcactgagattccccacgcctcagatccctgagtgccccctctgcggcaagccatttctc
accctgaagagcagaatcagtcatctgaaacagtgtgcggtgaagatggaggtcggcccg
cggctcctgctccaggctgtgcgcctgcagggggctcagcccgcaggcacctcaggcact
ccagcacccagcctcagcaatggagctggctgtctgaagcggaagggagccaccaccaag
aaggagccacggaagaggcggaaggtccctgagcccgaggcgccctccgaggacctgttg
gtagccatggctctgtcccgctcagagacggagcagcaggcggtgccggccgcgctcagg
ctggggaacgcttttgcagagaggacaaggctaggagcagagaagaagacccacaagaag
aaagcccccacgtcccccccacaactgttagtccaggatgcggagaccacgggccggcag
atacaggaccgcctggcccagctcctgtcggaggaggtggagccgtccagcacgccgcca
ctccccaccagcaggattctagaggaagagctggccaggggcagccgggtcctgcgaccc
cccaggggggcacagaacctgctgtgggaggccagtgccctcaccggggctagggccctg
gagtccttctacacggccagcctggtgcctcctctggtgccccaatggcctgccaagggt
ctcacacaggagcccatgcggctgccacagccacccaagctgccagaactgagtgtggga
gcacccgcttctgcccctggcacccaccccgtgagccacagcctccggagcccagcaccc
tccgccagccagagggagcgccaagccctgcaggatctgctggagctggcgggagagggg
ttgcctgccagcccatgcagcagggacctggccagctcagggggggctgcagggatggac
ttgtcgctcggtggccttccactgactgggtttgtcctgccagccaaggagaagtacccg
gaggagggcggccaggcttcgctcgcccttggtctgctggtggccgacttcagtgccatg
gtcaacaaccctcacctgagtgacgtccagtttcagacagacagtggggaggtgctctat
gcccacaagtttgtgctctatgcccgatgcccacttctcatgcagcatgtaaacagtgaa
gccttcctggccgaagaggatggtgacttgaggcgccagcgcgtgctgctgcgtgacgtc
agcaccgaggccgcccaggcattcctgcattacctctatgctgccgacaccatcctgact
ccccagctggcccctgacctgcgctctctggcccagaggtttggggtgagtgagcttgtt
tacctgtgcgaacaagtgccctttgtgatggatgcagaaggtggacaggcaaaggagcag
gaagacgacgctgacggcagagtggagactttccgagagctcctgcaccttgtgtggctg
ggtgaggaggagggagcagaggccctgctgaagccggagggccgcgaagaagacagagaa
aaggtcaacgaggaggagatggaagaaatttatgaattcgcagctactcagcgaaagctg
ctccagggggagaaagctccagagccagaggaagaagctgacctgctcggggaggatggt
ccagtttcgggggaaatcctcacaagtgaacaggataaagaacagccagaaaatgcagag
caggtggaatcatccgggcaaggaagagatgagaccccagccaaatggggaaacacgaga
cagtccacactcctgccccccagcgaccaggctttgaacggggcagagagagcagaggcc
ccagagggagcactggctcctccctgctcctccagccccgcccagggccagccagagagg
caggaaagcgcccctctgtgctcagctgatgatgataacgttcaacagcctttttcatca
cctcaagctggatactctgaactctcccgggtgacgagcgattgggaagaaggaaacagg
accatccaagaaagggaggtagaggggttccatccccctgcacaccagcaggcacccccc
tcacgctcatgcttcccaccgcagccccatcaaggccagagtcctcgccagccacgtcct
cacactcgttgccccaatgacctgtccccaccaatactccagttgcaggccacagcttcc
agcatggcctcccagaacttatcactgaagccaaagaaagccaggcgccttccctcgtca
cgtgaggatccaggccagaaagacaaggagtgtagttccgcactgggatgcagaggtaaa
ggggtcctgatcttcccagaaaaatctccacccatggatctaacccggtcaggacctggc
cgccggagctccaggcctgagacctctccccgcagcatgaacagagaagacgaggtgatc
ctgttactggattcagatgaagagctggagctggagcaaaccaaagcaaagtcatttctg
aacagtcccttagaagacaagaaagttctggaagtcagcgccaagtcctctgaactgttt
tccatcattgaccttgacgcggagcaggagcctccccaaagcccaccaggaagccaggcc
ctgctgccgcaggaggtggaggggcggctaggggccagcaccgacgacagcaccacggac
acctcgtggctcgtgcccgctaccccgctggccggcgggagctgcgactgttcctcgcag
acccagatcacaggcctcggggccaggccgccagcagacccgctggctctgcccaagccc
agggccctgttagagaacagggacgaacccgaagccacgagtaagttttcggtcatcata
ccccagatgtcgtccccacacctgggacccgcccctcctggaggctctgacgggagaagg
caggcctgcagcagcccatccagcccccgccgcagactcctcccacgtgcttctcctctg
gctccccggcccatcttaggaggcctcgccgacctccccaggcagctcccgaagtgcctg
cctcctgtgcggagcccggcggctcaggctcccgtgagtgaagtggtggaggtggaggac
agtgaggacgagcaggaggcagcctcccaacaggcaagcagcagccccctgctggacggt
gaccccccgcttccagccgaggactggtgctggcacatggagcccctctcaccgatcccc
attgatcacctgaacctcgagcggacagggcccttgagcaccagcagccccagcaacagg
gcagagggtgccccagacagcagagactgccactccccggcactgctgggcaccacccca
atccgagggagctacactggccggaggaagtctcaagagaagtcctctggggctggctcc
cctgggagccaccagcagagctttctgaactcagctctgtgggatgactggaacgaagaa
gatcagaggtcctcagaggcagctcctctgccccagacgccgcgcacagatggagcccag
aggtcatacaagttacagacgccagaaggtgctgatcggaagaagaacttgcccccgaaa
gtgcccataaccccaatgccaaggtactccatcatggagactccagtgctgaagaaagag
ctggacaggtttggggtccgccctctgcccaaacgccagatggtcctgaaactgaaggag
atattccagtacactcatcagacgctggagtcagactccgagaacgagggccagtccaca
cagctgcccttggaggctccctgcagccagacctacaccacccagaccgctaaggcttca
agggcagctggccacacccagctggaggcccctcctggccgcgttccccagaggtccaag
ggacttgccaagaccaagggcccccaacatcacaagcagcagcctggtggcagcatctct
gccctgagtgtgtcaccagccaaggaggagcctttggaccctggtggggacgcccagctc
ccggcctcacaggagtccacggccacgtctgtggacagcggggacagctgctgcagctcg
cagagctcatcctgtgagtttggagcggccttggagtctgtgggagaagaggaggcaggc
gaggaggtggtcagcacctcacacgcggccgtccaggcagtggccacagaggaggccgtg
cggcgctatatccgctcccagccggccctctaccgcaaggtcctgctgtaccagcccgtc
gagctggcggagctgcaggctgagctgaagcagcagggcatccacgtggcctcggggaag
ctgctggacttcctggacacccagtgcatcaccttcaccacggccgccacccgcaaagag
aagcttgggaggaagaggcggcagccagcgggcaagaagaggggcagagcccgcaggccc
gcccctcactccccagtcccagccgtcagcagcctgtga
DBGET
integrated database retrieval system
