KEGG   Ovis aries (sheep): 105604798
Entry
105604798         CDS       T03117                                 
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X4
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
oas  Ovis aries (sheep)
Pathway
oas03015  mRNA surveillance pathway
oas05164  Influenza A
Brite
KEGG Orthology (KO) [BR:oas00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105604798 (CPSF4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    105604798 (CPSF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oas03021]
    105604798 (CPSF4)
   03019 Messenger RNA biogenesis [BR:oas03019]
    105604798 (CPSF4)
Transcription machinery [BR:oas03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     105604798 (CPSF4)
Messenger RNA biogenesis [BR:oas03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     105604798 (CPSF4)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_3 Torus zf-CCCH_2 zf-CCCH_12 zf-CCHC zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_DUS3L zf-C3H1 zf-CCHC_3 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 105604798
NCBI-ProteinID: XP_027816971
LinkDB
Position
24:complement(37403324..37415578)
AA seq 269 aa
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPTKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGSRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcaggaaatcatcgccagcgtggaccacatcaagttcgacttggagatcgccgtggag
cagcagctcggggcgcagccgctgcccttccccggcatggacaagtcaggggctgctgtc
tgcgaattctttttgaaagctgcctgtggcaaagggggcatgtgcccgttccgccacatc
agtggtgagaagacggtggtgtgcaaacactggctgcgggggctgtgcaagaagggggac
cagtgcgagttcctgcacgagtacgacatgaccaagatgcccgagtgctacttctactcc
aagttcggggagtgcagcaacaaggagtgcccgttcctgcacatcgaccccgagtccaag
atcaaggactgcccgtggtacgaccgcggcttctgcaagcacggccccctctgcaggcac
cggcacacgcggagagtcatctgtgtcaattacctcgtgggattctgcccggaggggccc
tcgtgtaaattcatgcaccctcgatttgaactgccgatgggaaccactgagcagcccccg
ctgccgcagcagacgcaaccacccacaaagcaaagtaacaatccgccattacaaaggtcg
tcctccttgatccagttaacgagtcagaactcttctcccaaccagcagagaaccccgcag
gtcatcggggtcatgcagagtcaaaacagcagcgccggcagccgaggaccccggccactg
gagcaggtcacgtgctacaagtgtggtgaaaaaggacactacgccaacagatgcaccaaa
gggcacctggcctttctcagcggacagtga

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