Octadecabacter antarcticus: OAN307_c01230
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Entry
OAN307_c01230 CDS
T02538
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
oat
Octadecabacter antarcticus
Brite
KEGG Orthology (KO) [BR:
oat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oat03032
]
OAN307_c01230 (hup)
03036 Chromosome and associated proteins [BR:
oat03036
]
OAN307_c01230 (hup)
03400 DNA repair and recombination proteins [BR:
oat03400
]
OAN307_c01230 (hup)
DNA replication proteins [BR:
oat03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OAN307_c01230 (hup)
Chromosome and associated proteins [BR:
oat03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OAN307_c01230 (hup)
DNA repair and recombination proteins [BR:
oat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OAN307_c01230 (hup)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AGI65894
UniProt:
M9QZV4
LinkDB
All DBs
Position
complement(123564..123854)
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AA seq
96 aa
AA seq
DB search
MATKPMTKTQLVAALAEDMGTDKKSASASLDAIVGLITREVSGGGAVTLPGVGKIYCRER
PERMVRNPATGEQIKKDADKVVKMTIAKALKDSVNG
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaaccaatgaccaagacgcaacttgttgcagcgctggcagaagacatgggt
acggacaagaaatccgcatccgcatcgcttgatgcgatcgtaggtcttatcacccgcgaa
gtatctggcggtggtgctgtgactctgccaggcgttggcaaaatttactgccgtgaacgt
ccagagcgtatggttcgcaacccagcaacgggtgagcagatcaagaaagacgccgacaaa
gtggttaagatgaccatcgcgaaggcactgaaagacagcgtgaacggctaa
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