Octadecabacter antarcticus: OAN307_c15050
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Entry
OAN307_c15050 CDS
T02538
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
oat
Octadecabacter antarcticus
Brite
KEGG Orthology (KO) [BR:
oat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oat03009
]
OAN307_c15050 (rluD)
Enzymes [BR:
oat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
OAN307_c15050 (rluD)
Ribosome biogenesis [BR:
oat03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OAN307_c15050 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AGI67179
UniProt:
M9R3G7
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All DBs
Position
1496609..1497643
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AA seq
344 aa
AA seq
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MSATTVLFTLAENPPARMDKALALNVPLDASLSRSRLMRLLADGAVQVNGAVVTDPRAKP
VEGDAVEILVEIADDYHVLPEDIPLDVVFEDDDLIVINKPTGMVVHPAPGTPGGTLVNAL
LHHCGDALSGVGGEKRPGIVHRIDKETSGLLVVAKTDRAHHGLAAQFEAHTVERHYRAIC
YGVPDSNDPRVRGIKGASFDPGNILKLQTQLARHKHDRQKQAVVWHNGRHAVTRARIVQP
LGNPAVAAVMDCWLETGRTHQIRVHMTHAGHGLIGDPTYGGRRKLSEKAVGEAGRIAAYT
FPRQALHAATLGFQHPVSKEMLRFEAPMPADMIRLIAALGGVEG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccacgaccgtcctgtttacccttgccgaaaacccgcccgcgcggatggataag
gcgttggcgctaaacgtaccacttgatgcgtcgctgagccggtcgcgcctgatgcgtctg
ctggcggatggggcagtgcaggtgaacggtgcggtggtgacggacccgcgcgcaaagcct
gttgaaggcgatgcggttgagattttggttgagatcgcggatgactaccacgtcctgccc
gaagacatcccgctggatgtggtgtttgaagatgatgatctgatcgtcataaataaaccc
acaggcatggttgtgcatcctgcccctggtacgccggggggtacgttagtgaacgcactg
ttgcatcactgcggtgacgcgctgtctggtgtcggcggtgaaaagcgcccgggtatcgtg
caccggatcgacaaggaaaccagcgggctgttggttgtcgccaagactgaccgcgcccat
cacgggcttgctgcacagtttgaggcgcacacagttgaacgccattaccgcgccatttgt
tacggtgtgccagacagcaacgatccgcgtgtgcgcggcatcaagggtgcgtcgtttgat
ccgggcaatatcctgaaactgcaaacgcaactggcgcgccataaacatgaccgccaaaaa
caagcagtcgtttggcacaatggacgccatgcggtgacgcgcgcgcgcattgtgcagccg
ctgggcaacccagcggtggctgcggtaatggattgttggctggaaactggccgcacgcac
caaattcgtgtgcacatgacccacgcgggccatggcctcattggggatccgacctatggc
ggccgccgcaaattgtccgaaaaagctgtgggtgaggcgggcaggatcgcggcttatacg
ttcccccgccaagcactgcacgccgcaacgttggggtttcagcatcccgtgagcaaagaa
atgctgcgtttcgaggcaccgatgcccgccgatatgatcaggctgattgccgctttgggc
ggggtagagggttaa
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