Octadecabacter antarcticus: OAN307_c21200
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Entry
OAN307_c21200 CDS
T02538
Name
(GenBank) putative ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
oat
Octadecabacter antarcticus
Pathway
oat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OAN307_c21200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oat03019
]
OAN307_c21200
Messenger RNA biogenesis [BR:
oat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OAN307_c21200
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AGI67752
UniProt:
M9R6A1
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Position
2115540..2117192
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AA seq
550 aa
AA seq
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MYLPLGGAGEIGMNCYVYGYGPADAERLIVVDLGVTFPDMDGTPGVDLILPDISWLAARK
SQIEAIFITHGHEDHVGAVGHLYERLGAPIYARAFTANLARRKMSEHGFSDKTVKTVGKW
PETVKAGPFEVGFVPISHSIPESSGLVIDSKGGRIIHTGDFKIDVEPGIGEPFDHDLWAS
LGKDGVKALVCDSTNVFSREEGRSESTVGPEIEKFLINAKGMVAATTFASNVSRVRTIAL
AAERAGRSVCLLGRSMRRMVEAATEVGILNDFPNVIPPEDVGNFPRENVLLLVTGSQGER
RAASAQLANGKYMGITMKEGDTFLFSSKTIPGNEKGVIHVMNQFSELGVDVVDDSSGGLY
HVSGHANRPDLDTMRDLIKPQTLIPMHGEHRHLREHVKIGEAAGVQGVLAVNGMMIDLSG
NKPKVVEHIETGRMYLDGSVKVGQFDGVVRDRIRMALNGHVIVTLIIDENGDPMGDPWCE
IMGLPKQGRNNAPLADVLEEDLSQFLARANDRTLADDDKLEKELRTITRKTAHGEIGKKP
EVTVVISRLA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtatctccccctcggtggcgcgggcgagattggtatgaattgttacgtttacggctat
ggccccgcggacgcagaacgcctgatcgtcgtggatttgggtgtcacgttccccgacatg
gacggcacaccgggggtcgatttgatcctgccggatatttcgtggctcgcagcccgcaaa
agccagattgaggcgattttcatcacccacggtcacgaagaccacgttggcgctgttggt
catttgtacgaacgccttggtgcgccaatttatgcgcgtgcgttcacggccaacctcgcg
cggcgcaagatgtctgaacacgggttctctgacaagaccgtgaagactgtcggcaaatgg
ccagaaaccgtaaaggctggcccgtttgaggttggatttgtgccgatttcgcattcgata
cccgaaagctcgggcctcgtgatcgacagcaaaggggggcggatcatccacaccggcgat
ttcaagattgatgtcgaacccggtatcggtgagccgttcgatcatgatctttgggcgtca
ttgggcaaagacggtgtcaaagcgctggtgtgcgattccaccaatgtgttttcgcgcgaa
gaaggccgcagcgagtccactgtcgggccagagatcgaaaagttcctaatcaacgccaaa
ggcatggttgcggcgaccacatttgcgtccaacgtgtcgcgcgttcgcacgattgcgctg
gcagctgaacgtgcgggtcggtctgtgtgtttgctgggccgttccatgcgacgcatggtc
gaagccgcaaccgaagttggcattttgaacgacttcccaaatgtgattccaccagaagac
gtgggcaatttcccgcgcgaaaacgtgctgttgttggtgacaggatcgcaaggcgaacgc
cgcgcagcgtctgcacaactggccaacggcaagtacatgggcatcacgatgaaagagggc
gacacgttcctgttttcatccaaaaccattcctggaaacgagaagggtgtcatccatgtc
atgaaccaattcagtgagttgggtgttgatgtggtcgacgattccagtggcgggttgtat
catgtttccggccacgcgaaccgccccgatctggacaccatgcgcgatttgatcaagcca
caaacgctgatcccgatgcacggtgaacaccgccacttgcgcgagcacgttaagatcggc
gaggccgctggcgtacaaggcgtgctggctgtaaacgggatgatgattgatctgtccggc
aacaagccgaaggttgttgagcacatcgagacgggccgcatgtatctggatggatcggtc
aaagtcggccagtttgacggtgtggtccgcgaccgcattcgcatggcactaaatggccat
gtgatcgtgacgctgatcattgacgaaaacggtgatccgatgggtgacccttggtgcgaa
atcatgggcctgccaaaacaggggcgtaacaatgcgccgctcgcggatgtcctagaagaa
gacctgagccagttcttggcgcgcgccaatgatcgcacgttggccgatgatgataagctc
gaaaaagagctgcgcaccatcacgcgtaagaccgcccatggcgaaattggcaagaagcca
gaagtgactgtggttatttcacgactggcgtaa
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