KEGG   Octadecabacter antarcticus: OAN307_c21200
Entry
OAN307_c21200     CDS       T02538                                 
Name
(GenBank) putative ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
oat  Octadecabacter antarcticus
Pathway
oat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OAN307_c21200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oat03019]
    OAN307_c21200
Messenger RNA biogenesis [BR:oat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     OAN307_c21200
SSDB
Motif
Pfam: RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Lactamase_B_6
Other DBs
NCBI-ProteinID: AGI67752
UniProt: M9R6A1
LinkDB
Position
2115540..2117192
AA seq 550 aa
MYLPLGGAGEIGMNCYVYGYGPADAERLIVVDLGVTFPDMDGTPGVDLILPDISWLAARK
SQIEAIFITHGHEDHVGAVGHLYERLGAPIYARAFTANLARRKMSEHGFSDKTVKTVGKW
PETVKAGPFEVGFVPISHSIPESSGLVIDSKGGRIIHTGDFKIDVEPGIGEPFDHDLWAS
LGKDGVKALVCDSTNVFSREEGRSESTVGPEIEKFLINAKGMVAATTFASNVSRVRTIAL
AAERAGRSVCLLGRSMRRMVEAATEVGILNDFPNVIPPEDVGNFPRENVLLLVTGSQGER
RAASAQLANGKYMGITMKEGDTFLFSSKTIPGNEKGVIHVMNQFSELGVDVVDDSSGGLY
HVSGHANRPDLDTMRDLIKPQTLIPMHGEHRHLREHVKIGEAAGVQGVLAVNGMMIDLSG
NKPKVVEHIETGRMYLDGSVKVGQFDGVVRDRIRMALNGHVIVTLIIDENGDPMGDPWCE
IMGLPKQGRNNAPLADVLEEDLSQFLARANDRTLADDDKLEKELRTITRKTAHGEIGKKP
EVTVVISRLA
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgtatctccccctcggtggcgcgggcgagattggtatgaattgttacgtttacggctat
ggccccgcggacgcagaacgcctgatcgtcgtggatttgggtgtcacgttccccgacatg
gacggcacaccgggggtcgatttgatcctgccggatatttcgtggctcgcagcccgcaaa
agccagattgaggcgattttcatcacccacggtcacgaagaccacgttggcgctgttggt
catttgtacgaacgccttggtgcgccaatttatgcgcgtgcgttcacggccaacctcgcg
cggcgcaagatgtctgaacacgggttctctgacaagaccgtgaagactgtcggcaaatgg
ccagaaaccgtaaaggctggcccgtttgaggttggatttgtgccgatttcgcattcgata
cccgaaagctcgggcctcgtgatcgacagcaaaggggggcggatcatccacaccggcgat
ttcaagattgatgtcgaacccggtatcggtgagccgttcgatcatgatctttgggcgtca
ttgggcaaagacggtgtcaaagcgctggtgtgcgattccaccaatgtgttttcgcgcgaa
gaaggccgcagcgagtccactgtcgggccagagatcgaaaagttcctaatcaacgccaaa
ggcatggttgcggcgaccacatttgcgtccaacgtgtcgcgcgttcgcacgattgcgctg
gcagctgaacgtgcgggtcggtctgtgtgtttgctgggccgttccatgcgacgcatggtc
gaagccgcaaccgaagttggcattttgaacgacttcccaaatgtgattccaccagaagac
gtgggcaatttcccgcgcgaaaacgtgctgttgttggtgacaggatcgcaaggcgaacgc
cgcgcagcgtctgcacaactggccaacggcaagtacatgggcatcacgatgaaagagggc
gacacgttcctgttttcatccaaaaccattcctggaaacgagaagggtgtcatccatgtc
atgaaccaattcagtgagttgggtgttgatgtggtcgacgattccagtggcgggttgtat
catgtttccggccacgcgaaccgccccgatctggacaccatgcgcgatttgatcaagcca
caaacgctgatcccgatgcacggtgaacaccgccacttgcgcgagcacgttaagatcggc
gaggccgctggcgtacaaggcgtgctggctgtaaacgggatgatgattgatctgtccggc
aacaagccgaaggttgttgagcacatcgagacgggccgcatgtatctggatggatcggtc
aaagtcggccagtttgacggtgtggtccgcgaccgcattcgcatggcactaaatggccat
gtgatcgtgacgctgatcattgacgaaaacggtgatccgatgggtgacccttggtgcgaa
atcatgggcctgccaaaacaggggcgtaacaatgcgccgctcgcggatgtcctagaagaa
gacctgagccagttcttggcgcgcgccaatgatcgcacgttggccgatgatgataagctc
gaaaaagagctgcgcaccatcacgcgtaagaccgcccatggcgaaattggcaagaagcca
gaagtgactgtggttatttcacgactggcgtaa

DBGET integrated database retrieval system