Octadecabacter antarcticus: OAN307_c23860
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Entry
OAN307_c23860 CDS
T02538
Symbol
trmU
Name
(GenBank) tRNA [5-methylaminomethyl-2-thiouridylate]-methyltransferase TrmU
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
oat
Octadecabacter antarcticus
Pathway
oat04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
oat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
OAN307_c23860 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oat03016
]
OAN307_c23860 (trmU)
Enzymes [BR:
oat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
OAN307_c23860 (trmU)
Transfer RNA biogenesis [BR:
oat03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
OAN307_c23860 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
Arginosuc_synth
QueC
NAD_synthase
ThiI
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AGI68001
UniProt:
M9RC92
LinkDB
All DBs
Position
complement(2396657..2397796)
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AA seq
379 aa
AA seq
DB search
MPLDHPLNSLGFAKPPSQTRVVVAMSGGVDSSVVAAQLAEEGYDVVGVTLQLYDHGAALA
KKGACCAGRDIHDARRVAEDMGFPHYVLDYENTFREAVIDEFADSYLAGATPVPCIRCNE
RVKFKDLLETAKDLDADCMATGHYIQRKMGPRGAQLHCAEDANRDQSYFLFSTKPEQLEY
LRFPLGHLPSKDATRELARKYGLALADKPDSQDICFVPNGNYAAVIEKLRPGAAEPGNIV
DIDGTVLAQHRGVIHYTIGQRRGLGIGGLADPLYVVKLDVDKKHVIVGPKDLLTTRTVPV
REINWLGDDAFDSKTERHISVKIRSTKPPMEAIVRPLSATTAEIELLTPEEGVAPGQACV
FYDSDSSRIFGGGWIWRGY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgccccttgatcaccctctcaactcgctcggttttgcgaagccgccatcccaaacccgc
gtcgtcgttgcgatgtctggtggggtggacagttctgttgtcgccgcacagttggccgaa
gaaggctacgatgtggttggcgtgaccttgcagctttatgatcatggggccgcactggca
aaaaagggggcttgttgtgcggggcgagacattcatgatgcccgtcgcgttgcagaagat
atgggttttccccattatgtccttgattatgaaaacacttttcgtgaagcggtgattgat
gaattcgcggacagctaccttgcaggcgcgacccccgtgccatgtattcgctgcaacgaa
cgggtgaaattcaaggacctgctggaaaccgcaaaagatctggacgccgactgcatggcg
accgggcattatatccaacgcaaaatggggccgcgcggcgcacagctgcattgcgccgaa
gatgccaaccgcgatcaaagctattttctgttctcgaccaagcccgaacagctggaatat
ttgcgcttcccgctgggtcatctaccgagcaaagatgcgacgcgcgaactggcaagaaaa
tatgggctggcgctggcagataaacccgacagtcaagatatttgcttcgttccgaacgga
aattacgcggcggtgattgaaaaactgcgtcccggcgcggctgaacccggtaatatcgtc
gacatcgacggcaccgttctggcgcagcatcgtggcgtcatccattacaccatcgggcag
cgccgtgggcttggcatcggcgggttggctgatccattgtatgtggtgaagctggacgtg
gacaaaaaacatgtgattgtcggccctaaggacctactgaccacgcgaactgtgcctgtg
cgcgaaatcaactggcttggcgacgatgcgttcgattcgaagactgaacgccatatctcg
gtcaaaatccggtccaccaaacccccgatggaggcgatcgtgcgtccgctgtccgccaca
acagccgaaatcgaactgctgacccccgaagaaggcgtcgcacccggtcaggcctgtgtg
ttctacgattcagacagcagccgcatctttggcggtggctggatttggcgcgggtactaa
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