KEGG   Octadecabacter antarcticus: OAN307_c27370
Entry
OAN307_c27370     CDS       T02538                                 
Symbol
ihfA
Name
(GenBank) integration host factor subunit alpha
  KO
K04764  integration host factor subunit alpha
Organism
oat  Octadecabacter antarcticus
Brite
KEGG Orthology (KO) [BR:oat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oat03032]
    OAN307_c27370 (ihfA)
   03036 Chromosome and associated proteins [BR:oat03036]
    OAN307_c27370 (ihfA)
   03400 DNA repair and recombination proteins [BR:oat03400]
    OAN307_c27370 (ihfA)
DNA replication proteins [BR:oat03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    OAN307_c27370 (ihfA)
Chromosome and associated proteins [BR:oat03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    OAN307_c27370 (ihfA)
DNA repair and recombination proteins [BR:oat03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      OAN307_c27370 (ihfA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 DUF2267
Other DBs
NCBI-ProteinID: AGI68314
UniProt: M9R6M0
LinkDB
Position
2739735..2740037
AA seq 100 aa
MTDKTLTRMDLADAVHEEVGLSRNESSDLVESVLTQMSDALAGGDSVKISSFGTFSIRDK
AARIGRNPKTGEEVPITPRRVLSFRPSHLMKDRVAAGNKG
NT seq 303 nt   +upstreamnt  +downstreamnt
atgaccgataaaactttaacgcgtatggacctagcggacgcggtacatgaagaagtgggc
ctgtcacgcaatgaaagctccgatctagttgagagcgttttaacgcaaatgtctgacgcg
ctcgcggggggcgatagcgttaagatttcatccttcggaaccttttcgatccgcgacaag
gcggcccgcatcggccgcaatcccaagaccggcgaagaagtgccaatcacgccgcgccgc
gtgctgagctttcgcccaagccatttgatgaaagaccgcgtcgctgcgggcaacaaaggt
tag

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