Octadecabacter antarcticus: OAN307_c32570
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Entry
OAN307_c32570 CDS
T02538
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase PhrB
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
oat
Octadecabacter antarcticus
Brite
KEGG Orthology (KO) [BR:
oat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oat03400
]
OAN307_c32570 (phrB)
Enzymes [BR:
oat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OAN307_c32570 (phrB)
DNA repair and recombination proteins [BR:
oat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OAN307_c32570 (phrB)
Prokaryotic type
OAN307_c32570 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGI68774
UniProt:
M9R7X2
LinkDB
All DBs
Position
complement(3219116..3220525)
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AA seq
469 aa
AA seq
DB search
MKPVIYWVRRDFRIGDNAALSAACATGRPVIPVFICDEVVESHGAAPKFRLGEGVRVFGA
ALAVVGSRLVLRRGDALAVLREVVAQTGATGVYWNRLYDPASKARDTGVKAALKADGVEV
ASFTGHLLFEPWTVETKTGGFYRVFTPLWKTVRGRDVATPIPAPASVPAPDVWPTSDRLD
DWALGAAMVRGRDVLAAHICVGEAAARTRLETFIEGRVQSYQTNRDLPGVDGTSRLSENL
TYGEISPAVCWHAGWAAIHSGKGQAEIFCKELVWREFAYHLVHHTPHIVDRNWKEGWDSF
PWNTEDTAEVIAWKQGRTGIAFVDAAMREMYVSGTMHNRGRMIVASYLTKHLMTHWKVGQ
AWFDDCLTDWDPASNAMGWQWAAGSGPDAAPYFRVFNPVTQLDKFDRAGLYARTWIAEGQ
GDAPDTALSYFDAIPKNWGLAATDQYPAPVVDMATGRQRALEAYKGRDF
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacctgtgatttactgggtgcggcgggattttcgcatcggcgacaatgctgcgcta
tcggcggcctgtgccacggggcggccggtcattcctgtgttcatctgtgatgaggtcgtc
gagagccatggcgcagcgccgaagtttcgtcttggtgagggggtgcgggtttttggcgcg
gcattggcggtggtgggatcgcggctggttttgcgacgtggcgatgctttggcggtgtta
cgcgaggttgtggcgcagacgggtgccacaggggtgtattggaaccggctttatgacccc
gcgagcaaagcgcgcgacacaggcgtgaaggcggcgctgaaggccgacggggtcgaggtg
gcttcatttacgggccatttgttgtttgaaccttggacagttgaaactaagacgggcggg
ttttaccgcgtgtttacgccgctgtggaaaacggtgcgcgggcgcgatgttgctacgccg
atccctgcaccagcatctgtgcccgcgcccgatgtctggccgacgtcggatcggttggac
gattgggcattgggcgctgcaatggtgcgcgggcgtgatgttttggctgcgcacatctgc
gtgggtgaggcggcggcgcggacgcgtttggaaacctttatcgaggggcgtgtgcagagc
tatcaaaccaatcgcgatttgccgggggtggatgggacgtcgcgattaagtgaaaatctg
acctacggggaaatcagccctgcggtgtgttggcatgcaggctgggcggccattcacagt
ggtaaaggccaggctgaaatattttgcaaagagctggtctggcgcgaatttgcctatcat
ctggtccatcacacgccccatattgtcgatcgcaattggaaagagggctgggattccttt
ccgtggaacaccgaagacaccgccgaagtgattgcttggaaacaggggcgcacgggcatc
gcgttcgttgatgccgccatgcgcgagatgtatgtcagcggcacgatgcacaatcgcgga
cggatgattgtggcatcctatctgaccaaacatctgatgacccattggaaggtcgggcag
gcgtggtttgacgactgcctgaccgattgggaccctgccagcaatgcgatgggctggcag
tgggccgctgggtccggcccagacgcagcgccatattttcgggtgttcaatccggtaacg
cagctcgataagtttgaccgcgccgggctttacgcgcgcacatggatcgctgaagggcag
ggcgatgcgcccgacactgcgttgtcctattttgacgccatccccaaaaattggggtttg
gcggcgacggatcaatatcccgcgcccgtggtggatatggcaacagggcggcaacgcgcg
ctggaggcttacaagggtcgcgatttttaa
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