Octadecabacter antarcticus: OAN307_c33640
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Entry
OAN307_c33640 CDS
T02538
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
oat
Octadecabacter antarcticus
Brite
KEGG Orthology (KO) [BR:
oat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oat03016
]
OAN307_c33640
Enzymes [BR:
oat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OAN307_c33640
Transfer RNA biogenesis [BR:
oat03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OAN307_c33640
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGI68868
UniProt:
M9RAR0
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All DBs
Position
complement(3317021..3318178)
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AA seq
385 aa
AA seq
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MKTITTTAELATYCAQAAKYPYVTVDTEFLRERTYYSKLCLIQLAYMGDGDDDAVLLDPL
ANGLDLAPLYDLFKDENVVKVFHAARQDLEIFFVDQGIIPKPLFDTQVAAMVCGFGEQAG
YETLVRKIAKDNVDKSSRFTDWSRRPLSDAQKTYALADVTHLRVIYEYLSAELDKSGRKK
WVAEEMAVLNDPATYQADPDNAWKRVKTRTSSGKFLSIVRELARFREIHAKTRNIPRNRV
FKDDALVEIASTKPTSEDDLGRSRLLLREARRGDIADGILAAVQAGLNTKPEDAPRVDTS
LEKLQVNPALADMLRVLVKSAADNEGVAQKLIANSADLDAIAGGLRDVAALSGWRKEVFG
ADALRLCDGEIGLAVKGEKVVTFTL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccatcacaacgacagccgagcttgcgacgtattgcgcgcaggccgccaagtat
ccttacgtgaccgtggacactgaattcctgcgcgaacggacctattattcaaagctgtgc
ctcatccagctggcctatatgggcgacggcgacgatgatgcggtgctgctggacccgcta
gcgaacggccttgatctggcaccgctgtatgatctgtttaaagacgagaacgtggtgaaa
gtctttcacgctgcacgtcaagatctagagattttctttgtcgatcagggaatcataccg
aagccgctgtttgatacacaggtcgcggcgatggtgtgcgggtttggcgaacaggcaggc
tatgagacgctggtgcgcaaaatcgccaaggataatgttgataaatcgtcgcgttttacc
gactggtcacgccgacccttgagcgatgctcaaaagacttacgcgctggctgacgtgacc
catttgcgggtgatttatgagtatttgtcagccgagctcgacaagtctggtcgcaagaaa
tgggtggctgaggaaatggccgttctgaatgatccggcgacgtatcaagcggatcccgat
aacgcatggaaacgggtcaagacgcggacgagttcaggtaaattcttgtcaatcgtgcgt
gaattagcgcgattcagggaaatccacgcgaaaacgcgcaatattccgcgcaatcgtgtg
tttaaggatgacgccctggtggaaatcgcatcaaccaaaccaacgtccgaagatgacctt
ggtcggtcccgattgcttttacgtgaagcgcggcgtggcgacattgcggatggtattttg
gcggcagtgcaggcaggtctgaacaccaagcccgaggatgcgccgcgcgtggataccagc
cttgaaaagctgcaggtgaaccctgcgctggcggatatgctgcgcgtcttggtaaaatcg
gcggcggacaatgaaggtgttgcgcaaaaactgatcgcgaacagcgccgatctggatgcg
atcgcaggcggattgcgcgacgttgcagcgctaagcggatggcgcaaagaagtgtttggc
gcggatgcgttgcggctgtgcgacggcgaaatcggcttggcggtaaaaggcgaaaaggtt
gtgacctttacattgtga
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