Octadecabacter antarcticus: OAN307_c37240
Help
Entry
OAN307_c37240 CDS
T02538
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
oat
Octadecabacter antarcticus
Brite
KEGG Orthology (KO) [BR:
oat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oat03019
]
OAN307_c37240 (hrpB)
Enzymes [BR:
oat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OAN307_c37240 (hrpB)
Messenger RNA biogenesis [BR:
oat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OAN307_c37240 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
CON_HrpB
HA2_N
ResIII
AAA_30
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGI69183
UniProt:
M9RBP4
LinkDB
All DBs
Position
3671710..3674124
Genome browser
AA seq
804 aa
AA seq
DB search
MRDDLPIDDVLEELLAAVRARGCAVLQAPPGAGKTTRVPLALLQAGIVQGRIVMLEPRRL
ATRAAAERLAQQLGGAVGETVGYRMRGETKVSKATRIEVVTEGILTRMIQSDPELTGIGA
VIFDEFHERSLNADLGLALTLEVREALRPDLVIMVMSATLDAGPVADLVGAPTVTSQGHA
YAVEPRWLDRPLRKEDRFDAAAADLVAQAVGETQGGVLVFLPGEGEIRRVQGRLAGRLPN
DCSVRPLFGALPFADQRAAIAPVTSGRKIVLATSIAETSLTIEDIRVVVDCGRSRRARFD
PGSGMSRLVTERVTRAEATQRAGRAGRVAEGIAYKLWAKGEDGALAAFPPAEIEAADLTG
LAVELAVWGSDGLPFLTDPPTGALAEARSLLNALGALNGGRITEHGRALARLPLHPRLGH
MLVACGKAAAGLAALLSERDILQGAPADLSLRIKALAGERGGYSVRQGALARVKQEAKRL
AKLAPVRAEQPSEVYAAMAYPDRIALRRSGDDPRYVLSGGKGAVMDGADALAGQRLLIVT
DTDGNPREAKIRTALVISEADVRAVAGGQISVVQTCAWSKRSGKVLARSQEQLGAVVLSE
VAWTDVPRDAVAFAMLDGVRALGFKFSAAADRFRARVELVRAVAPDLPDLSDAALMDRLN
DWLLPYLQGVQTAAQWKSHDTLQALRAILTWDQMQRVDTEAPAQFTTPLGRHTPIDYSGE
APEITLRLQEMFGTTCHPTVAGRPLRVTFLSPGQKPIQTTMDVPGFWATSYGDVRKDMRG
RYPRHPWPEDPTQADPTLRVKPRR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagggacgatttacccattgatgacgtacttgaggagctgctggcggcggtgcgcgcg
cgcggctgcgcagttttacaggcaccaccaggtgcgggcaagacgacgcgggtgccattg
gcgctgttgcaggcgggcatcgtgcagggccggatcgtgatgctggaaccacgccgtttg
gcgacgcgcgcagcagcggaacggttggcacagcagcttggcggggcggtgggtgaaact
gtcggttaccggatgcgcggtgagacgaaggtgtccaaggccacgcggattgaggttgtg
acagagggaattttgactcgcatgatccagagcgacccggaattgaccggcatcggcgcg
gtgatctttgatgaatttcacgaacggtcgttgaacgcagatctaggattggcgttgacg
ctggaagtgcgcgaagcgctgcgccccgatctggtgattatggtcatgtccgcaacattg
gacgcggggcccgtagctgacttggttggcgcacccacagtcacgtcgcaggggcatgcc
tatgccgttgaaccacgctggctggaccgtccgttgcgcaaagaagatcggtttgacgca
gcggcggcggatttggtggcgcaggcggttggtgaaacccaaggcggcgtattggtgttt
ctgcccggagagggcgaaatccggcgggttcaggggcggctggcagggagattgccaaac
gattgttccgtgcgcccgttgtttggggcgttgccgtttgccgaccaacgcgccgcgatt
gcccccgtcacgtcggggcgcaagatcgtgctggccacatcgatcgcggaaacatctctc
acgatcgaagacattcgtgttgtggtcgattgtggacggtcccgtcgtgcgcggtttgat
cccggatcgggcatgtcgcggctggtgacggaacgcgtgacccgcgccgaggccacacag
cgcgcaggccgcgcggggcgggtcgccgaagggatcgcctataaactatgggccaaaggc
gaagacggcgcgttggcggcgtttccacccgctgagattgaggcggccgatctaacaggg
ctggcggttgaactggcggtctggggcagcgatggattgccgttcctgaccgacccgcca
acaggcgcactggccgaggcgcgcagcctgttgaatgctttgggggccctcaacggtggg
cggattaccgagcacggccgcgcattggcacggctgccactgcatccgcgtttgggccat
atgttggtggcatgcggcaaggcggcggcagggcttgcggcattgttgtcagaacgcgat
atcctgcaaggcgcacctgcggatttatctttgcgcatcaaagcactggcaggggaacgc
ggagggtattcggtgcgccaaggagcgctggcccgcgtcaaacaagaggccaagcggttg
gcgaaacttgcccctgttcgggctgaacaaccgagcgaagtctatgcggctatggcctac
cctgaccgcatcgcactgcggcgatccggcgatgacccgcgctacgtgctgtcgggcgga
aaaggcgctgtgatggatggcgcggatgccctcgcggggcagagattgttgatcgtcacc
gacaccgacggcaacccgcgagaggccaaaattcgcacggctctggtgatatccgaagct
gacgtgcgcgcggtggcgggggggcagatcagtgtcgtgcagacttgtgcgtggtccaaa
cgcagcggcaaagtgctggcgcgatcgcaggaacaattgggcgcagtggtgctgtcggag
gtggcatggacggacgtgccaagggacgcggtggcgtttgccatgctcgacggggtgcgc
gcgctggggttcaaattcagcgctgccgccgatcggtttcgcgcccgtgttgaactggtg
cgcgcagttgcaccggacttgccagacctgtcggacgcagcccttatggacaggctcaac
gactggcttctgccttacctgcaaggcgtgcagacggcggcacaatggaaatcccacgac
actctgcaagccttgcgcgcgatcttaacgtgggaccaaatgcagcgcgtggatactgag
gcccccgcacagttcaccacaccgttgggccgccacacaccgattgattacagcggtgag
gcgcctgaaatcacactgcgtctgcaggaaatgttcggaaccacctgccatccgaccgtc
gcgggccgccccctgcgcgtgacattcctgtccccaggacaaaaaccaatccagacaacc
atggacgttcccggtttctgggccacatcttacggtgacgtgcgcaaagacatgcgcggt
cgttacccgcgccatccgtggcccgaagacccgacgcaagccgacccgaccttgcgcgta
aaaccccgcagatag
DBGET
integrated database retrieval system
