Octadecabacter antarcticus: OAN307_c46250
Help
Entry
OAN307_c46250 CDS
T02538
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase Pnp
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
oat
Octadecabacter antarcticus
Pathway
oat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OAN307_c46250 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oat03019
]
OAN307_c46250 (pnp)
03016 Transfer RNA biogenesis [BR:
oat03016
]
OAN307_c46250 (pnp)
Enzymes [BR:
oat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OAN307_c46250 (pnp)
Messenger RNA biogenesis [BR:
oat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OAN307_c46250 (pnp)
Transfer RNA biogenesis [BR:
oat03016
]
Prokaryotic type
tRNA degradation factors
OAN307_c46250 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AGI69975
UniProt:
M9RJI9
LinkDB
All DBs
Position
4549746..4551878
Genome browser
AA seq
710 aa
AA seq
DB search
MFKEVKKSIQWGEETLTLETGKVARQADGTVIATYGETTVMANVTFAKKQKPGQDFFPLT
VHYGEKYYAAGKVPGGFFKREARPTEKETLTSRLIDRPIRPLFVEGFKNEVLVICTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPIAACRVGFEGGDYILNPEMDDMHKLRENPDQR
LDLVVAGTKDAVMMVESEAYELSEEEMLGAVEFAHAQIQPVIDMIVDLAEDAAKAPFDFQ
APDYSGLSKAVAKAGEKQMRKAFAIGDKQERTTAVNDARDAIKAALSEEQLSDENLGSAL
KKLEASILRGDVVKTGKRIDGRKTDEIRDIVSETGILPRTHGSALFTRGETQGLVVTTLG
TGDDEQMIDSLSGMYKSNFMLHYNFPPYSVGEVGRFGFTGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLIMQDDGSYA
ILSDILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITPAIMKEALAQAKVGRVHILGE
MNKALSSASEFSEHAPRIETMQIPVDKIREVIGSGGKVIREIVEMSGAKVDINDEGIIKI
ASPNGEAIKKAYDMIWSIVAEPEEGMVYTGTVVKIVDFGAFVNFFGKKDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQVTGEEVKEDAKED
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagaagtgaaaaaatccatccagtggggcgaagaaacgctgacactggaaact
ggtaaggtcgcacgtcaggcagacggcaccgtcatcgccacctacggcgaaaccaccgtt
atggccaacgtgacgttcgccaaaaagcaaaagccggggcaggatttctttccgctgacc
gtgcactacggtgaaaaatattatgccgccggtaaagtcccgggcggtttcttcaaacgc
gaggcgcgcccgactgagaaagagacgctcacaagccgtcttatcgaccgtccgatccgc
ccactgttcgtcgaaggcttcaagaacgaggtcctggtgatctgtaccgttctgtcccac
gatctggtcaacgatcccgacatggttgcgatgattgcagcctccgctgcgctgacgatt
tccggcgcgccgttcatgggcccaattgctgcttgccgtgttggttttgaaggtggcgat
tacatcctgaacccggaaatggacgacatgcacaagctgcgtgaaaaccctgatcagcgt
ttggaccttgttgttgcaggcaccaaagacgccgtgatgatggttgagtcagaagcatac
gagctgtctgaagaagaaatgcttggcgctgttgaatttgcccatgcgcaaatccagccc
gtcatcgacatgatcgtcgatctggccgaagacgccgccaaggcaccgttcgatttccaa
gcgcctgactattccggcctgtctaaggctgttgccaaggctggcgaaaagcaaatgcgc
aaagcctttgcaatcggtgacaagcaggaacgcacaacggccgtcaacgacgcccgcgac
gcaatcaaagctgcgctcagcgaagagcagcttagcgatgagaacctcggttccgcgctt
aagaaactcgaagcctccattctgcgcggcgacgttgttaaaactggtaagcggatcgac
ggtcgtaagactgacgaaatccgtgacatcgtatccgagactggcattctgccacggacc
cacggttctgccttgttcacacgcggcgaaacccaaggtttggttgtgaccacactgggc
accggcgacgacgaacagatgatcgacagcctgtctggcatgtataagtcgaatttcatg
ctgcactacaacttccccccatactcggttggtgaagtcggtcgtttcggtttcacgggt
cgtcgtgaaatcggccacggtaaactcgcatggcgcgcgcttcaggcagttctgccagca
gccacggatttcccttatacaattcgtgttgtgtctgagatcaccgagtccaacggctcg
tcctccatggcgtcggtatgtggtggctccttgtccatgatggacgctggtgttccactt
aaggcgccagttgctggtgttgcgatgggcctcatcatgcaggacgacggctcatacgcc
attctgtctgatattttgggtgacgaagaccacctcggtgatatggacttcaaggttgct
ggtacagaagcaggcattacgtccttgcagatggacatcaagatcgcaggcatcacgccc
gccatcatgaaagaagcactcgcacaggccaaagtcggccgggttcacatccttggtgag
atgaacaaagcgctgtcctcggcttccgaattctccgagcacgcaccacgcatcgaaacg
atgcagattccagtggataaaatccgcgaagtcatcggttccggcggtaaagtcatccgc
gagatcgtcgaaatgtccggcgccaaggtcgatatcaacgacgaaggcatcatcaagatc
gcgtcgccaaacggcgaagccatcaagaaggcctacgacatgatctggtccatcgtagcc
gaaccagaagagggcatggtctacaccggtacagtcgtcaaaatcgtcgacttcggtgca
ttcgtgaacttcttcggtaagaaagacggcctcgtgcatgtcagtcagatcgaaaaccgc
cgattgaaccacccgtctgacgttctgaaagaaggccaggaagtaaaagttaagcttctg
ggctttgacgatcgcggcaaggttcgcctgtcgatgaaagtcgtcgatcaggtcactggc
gaagaagtcaaagaagacgccaaggaagactaa
DBGET
integrated database retrieval system
