Octadecabacter antarcticus: OAN307_c46400
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Entry
OAN307_c46400 CDS
T02538
Name
(GenBank) putative 3'-5'-exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
oat
Octadecabacter antarcticus
Brite
KEGG Orthology (KO) [BR:
oat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oat03016
]
OAN307_c46400
Enzymes [BR:
oat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OAN307_c46400
Transfer RNA biogenesis [BR:
oat03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OAN307_c46400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AGI69989
UniProt:
M9RBN9
LinkDB
All DBs
Position
4565141..4565752
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AA seq
203 aa
AA seq
DB search
MPNHLYQHDLPDDLDLGPVVAIDCETMGLNPHRDRLCLIQLSSGDGNCHLIQISVGQTTA
PNLCKVLADPQVLKLFHFGRFDIAAMLNAFGTVTAPVYCTKIASKLIRTYTDRHGLKNLL
QEFLRVDISKFQQQSDWGAETLSKAQIDYAASDVLYLHQLRDELNIRLVRERRTDMAQAC
FDFLPMRAKLDLAGWPEQDIFSH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatcacctttatcagcatgatttgcctgacgaccttgatcttggccctgttgtc
gcgattgattgcgagacgatgggtctgaacccgcatcgcgatcgtctttgccttattcag
ctaagcagcggtgacggaaactgccacctcatccaaatttctgtaggccagaccacggcc
ccaaacctgtgtaaagtgcttgccgatccgcaggtgctgaaactattccacttcggtcgc
tttgatattgccgcaatgctcaacgcatttggaaccgttacagccccggtttattgcacc
aagattgcaagcaaactgatccggacctacacggatcgtcacgggctgaaaaacctgctg
caagaatttctgcgcgtcgacatttccaagttccagcagcaaagcgattggggcgccgaa
acactgtccaaagcgcagatcgattatgccgcatcggatgttttgtatctccatcagtta
cgtgatgaattgaacattcgtctggtgcgcgaacgtcgtacagacatggcgcaagcctgc
tttgatttcctgcccatgcgtgcgaaacttgatctggcaggttggcccgaacaggatata
ttttctcactga
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