KEGG   Oreochromis aureus (blue tilapia): 116309285
Entry
116309285         CDS       T07295                                 
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03082  ATP-dependent chromatin remodeling
oau03083  Polycomb repressive complex
oau04110  Cell cycle
oau04330  Notch signaling pathway
oau04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116309285
   03083 Polycomb repressive complex
    116309285
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    116309285
   04350 TGF-beta signaling pathway
    116309285
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    116309285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oau03036]
    116309285
Enzymes [BR:oau01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     116309285
Chromosome and associated proteins [BR:oau03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     116309285
   HDAC complexes
    Sin3A-HDAC complex
     116309285
    BRAF-HDAC complex
     116309285
    REST complex
     116309285
    SHIP complex
     116309285
    MiDAC complex
     116309285
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     116309285
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    116309285
  Chromatin remodeling factors
   NuRD complex
    116309285
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 116309285
NCBI-ProteinID: XP_031581713
Ensembl: ENSOABG00000017982
LinkDB
Position
LG15
AA seq 490 aa
MAYTTAGGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEVYRPHK
ATADEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNSQEY
MDKIKQRLFENLRMLPHAPGVQMQAIPEDAVPDDTVDEDTEDPDKRLSIRATDKRIACDE
EFSDSEDEGEGGRRNTANHKKGAKRPRVDEDKQEGEEKKADIKEEEKTKDSSAEKTDSKS
SVKTEQTSST
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggcttacacgaccgcaggtgggacaaagaagaaggtctgctactactacgacggtgac
ataggaaattattactatggacaggggcaccccatgaaaccacatcgtatccggatgacc
cacaacttacttctgaactatggactgtacaggaagatggaggtctataggccacacaaa
gccactgcagacgagatgacaaaatatcacagtgatgactacatcaagttcctccgatcc
atacgaccagacaacatgtcagagttcagcaaacagatgcagaggttcaatgttggggag
gactgtccggtattcgatggcttgtttgagttctgccaactgtctgctggtggttcagct
gctggctcagtgaagctgaaccgacaacagacagacattgcagtgaattgggcaggagga
ctccaccatgcaaagaaatctgaggcctcagggttctgttacgtcaatgacattgtgctg
gccatcctggagctgctcaagtaccaccagagggtgctgtacattgacatagacatccac
catggagatggagtggaggaggccttctacacaacagacagagttatgactgtgtccttc
cataaatatggggagtacttccctggaactggtgaccttcgggatattggagctggaaaa
ggcaaatattacgctgtcaacttcccactgcgggatggcatagatgatgagtcatacgag
caaatcttcaagcctgtgatggctaaggtgatggagatgtaccagcccagtgctgtggtt
cttcagtgtggtgcagactcactctcaggagaccgcctcggctgctttaacctcaccatc
cgagggcatgccaaatgtgtggaatacatcaagtcatttaacctgccactgctcatgctg
ggtggaggaggatacaccattcgaaatgtggcccgatgctggacctatgagacagctgtg
gctctggacactgacatccctgacgaactaccatacaatgactactttgagtacttcggg
cctgacttcaagctccacatcagcccctccaacatgaccaaccagaactcacaggaatac
atggacaaaatcaagcagcggctgtttgagaacctgcggatgctgcctcatgctccaggg
gttcagatgcaagccatcccggaggatgccgtcccagacgacacagtggatgaggacaca
gaggatcctgacaaacgcttgtccatccgtgctacagataagagaatagcctgtgacgaa
gagttctccgactctgaggacgaaggggagggaggcaggaggaacacagccaatcacaag
aaaggagctaaaaggcccagagtggacgaggacaaacaggaaggagaggagaagaaagct
gatataaaagaagaagagaagacaaaagacagcagtgctgagaagactgactcaaagagc
agtgtgaaaaccgaacagaccagcagtacctaa

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