Oreochromis aureus (blue tilapia): 116309452
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Entry
116309452 CDS
T07295
Symbol
lrrfip1a
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K26434
leucine-rich repeat flightless-interacting protein
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116309452 (lrrfip1a)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Other transcription factors
LRRFIP
116309452 (lrrfip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRRFIP
Calponin
Motif
Other DBs
NCBI-GeneID:
116309452
NCBI-ProteinID:
XP_031581900
Ensembl:
ENSOABG00000010008
LinkDB
All DBs
Position
LG16:complement(7343140..7390808)
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AA seq
1661 aa
AA seq
DB search
MGTQGTGRKRSTKKDKTTAEDDALNLIAREAEARLAAKRAARAEAREIRMKELERQQKEI
FQVQKKYYGLNTKLDDRVDNKWGDIEQWMEDSERYSRPSRIHMLSDDDERMSVGSRGSAR
SDLDAVGAYGGGGSSSHKKSKKKKKHKHKDRDKNGCDDEYSVISDRSSRLSDESRVSRSR
LDLTSSRLSDDSRLSRVSRSDLQLASYASSDLYSLNGLSSSRNPGSAFNGYQSSLYEDSL
CSGSRRVVSASSHPLEYTSYRSSGSRASSRAGSARTSPVDNCSSVASFLRSSSSGLPRDL
DDVTIPDFPDVSRFAPAGARGCDVEDRDYLEKGSRAASALTAGTLTSLGGSSSRRGSGET
ALTVDAESSIREIKEIHELKDQIQEVEAKYTQNLKEVKDALAEVEEKYRKAMVSNAQLDN
EKNNLMYQVDTLKDSLMELEELLTESRREYEEKVKEYEREKYAHSVLQFQFSEMKETLKQ
SEELLNEIRQLRLKQEGFVREITDLQETVEWKDKKIGALERQKEYTDAIRIERDELREEV
VKLKDILKKHGIVLGPDLSINGDVDVAEADESPSADPASQPAQDSQTTPAEGNGMLGNTE
ETELRSSREEEEVGPEQQQEMHEKAKENHMSSDLLCNAADVSTLKTSSEEQPQEEQQTCL
PAEKNNTGENGLSEDLNAEISDSPTTEPSSFELKEIVTSPDVPEREMSEGVSLKETSSPN
VVETDDKSVSVDTSEVQDSKQEAVEKSHLTNTELCPQQKVADVAPKENLTDESVPTASNI
EAQPEPENAEEAENDEAEETPSKSQPQGTPASGKKKKKKKRGKKKGGAQDDKTKQKNETA
NEKKKDKEPAGSNGGSAAELTADGSVNQTFKESKVDQVKEEQEKQETEEVNAVEPIESSK
CKEQTVSNECHEEETLETNTVEEAEMVEPTQAICEAQKEVTVAHVKDEQNQEQTLETKAT
DTVEAEEPTQSLSHAEILEETETDSKIDDQDTEQTLETNKIEETEEVSPAENPCQTETLS
SVIVDDVTEEQNKEQTLDIETDSAVETEEPTESSSHLETIKESIETDSKEADQEEKPTLE
VETLEEVESVACIENSETPSETIVGHVTEEQNDGETLETETVESVEALKSVETLEESRTD
SEKDEQDHEETFETEKVPEMETATNPDTEANICTVELNSNSAESTDRLDKECTSSVDDPE
RVGISADGDVIHTDQTEEKAESADDRKSDSTSNNTKNSPETSSNTEGESHVPTNGDIAAN
DSESASESKDNIFILPPSAEDSPSGVKGSSDTETSEVINSGTDDPPIDVTSDGPEESADG
EPRAETEQECPPAIVTSPHQDGDNLENKNLEEPKDLVNPDEKSNSCDGASSTESPEALSN
ETVVQDEELEISAAVMLDTPQAPQEATETGSSADQKLAVVEDPQHKNDQHEEESSLSAEQ
PHESNKDQSENNNQLENEGEEDDEDEGQSFDFDDMDIEAAEELSRCQNPEQEEIDEGVEL
TADETNNGLCQSNAESNENKSAEGSDGGNQADKDPDTVPQEDQNSVAHEEATSEKLENVC
EEEINAHKEEAGEADQPGKASEEVSSAGAPGAVAENINQTVSSLVEAGIDVVKNAVQDED
ADLPKSADQAGSNKGAAQSGKESKKSGKKGKGKGKEECKMS
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atggggacccaggggacaggacggaaaaggtccactaaaaaggacaaaacgacggcagag
gacgatgccctgaatctcatagccagagaggccgaggccaggctggcagcaaagagggca
gccagggcagaagcccgagagatccgcatgaaggagctggagcgacaacagaaagagatc
tttcaggtgcagaagaaatactatggcttgaacaccaaattagatgaccgcgtggacaac
aaatggggagatattgagcaatggatggaagacagtgagaggtactcacgtccttcacgg
attcacatgctctcagacgacgatgagcggatgtcagtgggaagccgaggcagcgccagg
tctgatcttgatgcagttggagcttatggtggagggggctcctcctcacataagaagtca
aagaaaaagaagaaacataagcacaaagacagagataaaaacggctgtgatgacgaatac
agcgtcatatctgacaggagctcaagactcagtgatgaaagcagagtgtctcgctccagg
ctagacctcacgagctccagactgagcgatgacagccggctgtctcgtgtctcccggtca
gacctgcagctggcttcttacgcttcttctgacttgtacagcctcaatggtctgtcctct
tccagaaacccaggctcagctttcaatggttaccagagctccttatatgaagacagtctg
tgcagtgggtcgcggcgagtcgtcagcgctagctctcatcctttagagtacactagttat
cgcagctccggctccagagcctccagcagggccgggtcagcccgtaccagcccagtggac
aattgcagctctgttgccagttttttgagaagcagtagcagtggccttcccagggacctg
gacgatgtcactattcccgactttcctgacgtgagtcgctttgcacccgcaggagcccga
ggctgtgatgtggaggacagagattatcttgagaagggatctcgagcagcttcagcctta
acagcaggcacgctcacttcattaggagggtcgtcctcccggagaggaagcggagagacg
gctttaactgtagacgccgagagctctatacgagaaatcaaggagattcacgaactgaag
gatcaaattcaggaagtggaagccaagtacactcagaacctaaaagaagtcaaggatgca
ctagcagaagtggaggagaagtatcgtaaggccatggtgtcgaacgctcagctggacaat
gagaaaaacaacctgatgtaccaggtggacacgctcaaagactcactcatggagcttgag
gagctgctaactgagtcacgccgagagtacgaggagaaagtcaaggaatatgagcgagag
aagtatgcccacagtgtgcttcagttccagttcagtgaaatgaaagagacgctaaagcaa
agtgaagagctgctaaacgagatccgtcagctgcgtttgaaacaggagggttttgttaga
gaaattactgatctgcaggagacggtggagtggaaggataaaaaaattggggccttagag
cggcagaaagaatacacagatgcaatccgaattgagcgcgatgagctcagagaagaagtc
gtgaagctgaaagatattctgaagaaacatggaatagtgttgggacctgatctgagcatc
aatggggatgtcgatgtggcagaagctgacgagtcccctagtgcagaccctgcttcccaa
ccagctcaggactcgcagacgaccccagcagagggaaacggcatgctcggcaacacagag
gagactgagttgagaagtagcagagaagaggaagaagtgggtccagagcagcaacaagaa
atgcacgagaaagccaaagagaatcatatgagctctgatcttctctgtaatgctgctgat
gtttccacactgaaaacatccagtgaagaacagccacaagaagaacaacagacctgctta
cctgcagagaaaaacaacactggagaaaatggtctcagtgaggacttaaatgcagaaatc
agtgactctcctactacagaacccagtagttttgagctgaaagagattgtaacaagtcct
gatgttccagaaagagaaatgtctgagggggttagtttaaaagagacgagtagtccaaat
gtagtcgagacagatgacaaaagtgttagtgttgacaccagtgaggtgcaagacagcaaa
caggaagctgttgagaaaagtcatttaacaaatactgaattatgtcctcaacaaaaagtt
gcagatgttgctccaaaagaaaatttaaccgatgaatccgttccaactgcttcaaacatt
gaagctcaacctgagcctgaaaatgcagaagaggcagagaacgatgaggcagaggaaacg
cccagtaaatctcagcctcagggtactcctgcttcagggaaaaagaagaaaaagaagaag
agaggcaaaaagaaaggaggggctcaagatgataagaccaaacagaaaaatgaaacggcg
aatgaaaagaaaaaagacaaagaaccagcaggaagtaatggtggatctgctgcagaactt
actgccgatggctctgtcaatcaaacctttaaggaatccaaggtggatcaagtcaaggaa
gagcaggaaaagcaagaaactgaggaagtcaatgcagtggagccgatcgaatccagtaaa
tgtaaagaacaaactgtttcaaatgagtgccatgaggaagaaactttggaaaccaacaca
gtagaagaagcagaaatggtagaacctactcaggccatttgtgaagcccaaaaagaagta
acagtggctcatgttaaggatgaacagaaccaggaacaaactttagaaacaaaggccaca
gatacagtagaggcagaggaacctactcaaagtttgtctcatgcagaaattctcgaggaa
actgaaacagactccaaaattgatgatcaagacaccgaacaaactctagaaaccaacaag
atagaagaaacagaagaagtatcacctgctgaaaacccttgtcaaacagaaactctcagc
agcgtaatagtggatgatgttacagaggaacagaataaagaacaaactttggacatagag
actgacagtgcagtagagacagaagaacccactgaaagttcttctcatttggaaaccatc
aaggaatcaatagaaacagattccaaagaggctgatcaagaggagaaacctactttggaa
gtagagacattagaagaagtggaatctgtggcctgtattgaaaacagtgaaactcccagt
gaaacaatagtgggtcacgttacagaagaacagaatgatggagaaactttggaaacagag
actgtagaatcagtagaggcactgaaaagtgttgaaactcttgaagaatccagaacagat
tctgaaaaagatgaacaagaccacgaggaaacctttgaaaccgagaaagtaccagaaatg
gaaacagcaacaaatcctgacacagaggccaacatctgtacagtcgaactcaactccaac
agtgcagagagcactgatcgccttgacaaagagtgtacgtccagtgtagatgatcctgaa
agggtcggtatctcagctgatggtgatgtcatccatactgatcaaacagaagagaaagca
gagtctgctgacgacaggaaatctgacagcacatctaacaacaccaaaaacagccctgaa
acgagcagcaacactgaaggagaatcacacgttccaaccaatggtgacattgctgccaat
gactcggagtctgcttctgagagtaaagacaacatattcatcctgccaccgtctgctgaa
gactccccgagtggtgtcaaaggttcatctgacacggagacatccgaagttataaactct
ggtacagatgaccctcccatcgacgttaccagcgacggtcctgaggagtccgctgatggg
gagccaagagcagagactgaacaagagtgccctcctgccattgtcacatctccacatcag
gatggtgataatttagaaaacaaaaatctggaagaacccaaagatttagttaatccagat
gaaaaaagcaacagttgtgatggtgcgtcatcaacagaaagccctgaagccttaagcaat
gagactgtagtgcaggacgaagaactagagatcagtgctgctgtcatgttagatacgcca
caggctccacaagaagctactgagactggttcttcagctgatcagaaattggctgtcgtg
gaagatccacaacataaaaatgatcaacatgaggaagagtcatccttgtcagctgagcaa
ccgcatgaatccaacaaagaccaatctgaaaataataatcagttggagaatgaaggggaa
gaggatgatgaagatgaagggcagtcttttgattttgatgacatggatattgaagcagct
gaagaattgagtcgttgccaaaatccagagcaggaagaaattgatgagggagttgaatta
acggcagatgaaaccaacaatgggctgtgccaaagtaatgccgagtcaaatgaaaacaag
tcagctgaaggcagtgatggaggtaaccaggcagataaagacccagatacggtgcctcaa
gaagaccaaaactctgtggctcatgaggaagctacctcagaaaagttggaaaatgtgtgt
gaagaagagataaacgcacataaagaagaagccggtgaagcagaccagccaggcaaagct
tcagaggaagtctcgagcgctggagcgccgggagctgttgcagagaacattaaccagact
gtgtcttcattagtagaggcagggatagatgtggtcaagaatgcggtgcaggatgaagat
gcagatttaccaaagagtgcagaccaagcgggcagcaataaaggggcagcacagtcaggg
aaggagtcaaagaagagtggaaagaaaggcaaaggaaagggcaaagaggaatgtaagatg
tcgtag
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integrated database retrieval system