Oreochromis aureus (blue tilapia): 116310428
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Entry
116310428 CDS
T07295
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116310428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116310428
03021 Transcription machinery [BR:
oau03021
]
116310428
03036 Chromosome and associated proteins [BR:
oau03036
]
116310428
Transcription factors [BR:
oau03000
]
Eukaryotic type
Helix-turn-helix
ARID
116310428
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116310428
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116310428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
116310428
NCBI-ProteinID:
XP_039459392
LinkDB
All DBs
Position
LG19:complement(2121560..2279420)
Genome browser
AA seq
2300 aa
AA seq
DB search
MAAQVASAPTRTNSKNKKLAGGLGPELNSGKSGGGGTGQRTGPMLAAGDGTLNNVDNHRR
NELSMVHSTSTSHGAPDGHDKAGNNLASATASTNSSASSMESSLIANHKLKCAGSGDPPQ
SQPPQQPPPQFGQFAPHQQRQIQSNNSASNNGQVPRGDRSADHQHHSGKENLLGGQEEPQ
QQHMTGKGEGELTCKPSERMMAARYEHSNLGPPSNNSEFNNNYYTPRPCYEQHGGQQQQS
SGMGITHSSAHNSMENSHEAGYHNSQYGQYPAYRAGYGGGGYGMMGPSGCRQPGNMMMGS
NSSASHGKSPLGAASAGFQRFPGQTQPQQQQQHPSGATPTLNQLLTSPSPMMRGYGGAYQ
DYSGPAAQQQAGMGPGKDVGSQYGATSAHWGGQQRSHPHAMNPGNATQGLGRTQVSSMDF
MAMKRSQLYGMSNNPYSAPQQPGAGPYPPSQPYASPPPHRYPMSLQGRGQMGMGGMQYPQ
QQQVVPYGQQGMVGYSQQQQQQQQQGGQQGTPPYFSPPHQTPPGPTPSSYLQPRPPLQQE
AQQESYSIRGPTPGNSGKANNEDNVSHERPSSLPDLSGSIDDLPTGEAGLGSAVGAGGSS
SSSSSSQGEQGSTGNQGQSPFSPHASPHLPSQRSGPSPSPVGSPAGSTQSQQSRSGSGPI
SPASAPSANTSVPGSAMAPQSSGNGPDGGHPPITRSPMAQERGFNMQRNQAASQFASPQT
GPPMSPHPSPGGPLYSGVGPYSQSGPAGPYGPHAPQYGHQGNYARPSNYSGTASTGYSGP
GPGVTNSLGMNATSPMHGQGPGQPVPGGRGPGPGSQNRVYPAMGPTSPSVPQPAGPGMGP
PSLGSSNRKTQEAAAAAVPGSANSVHNRMPLYTRPPAQTQPTSTRWPTPHHSSTCPLPSP
PPRPHPPCIHSHQHRQSNYQGPGMSQASAVPYSQPAGSNAAATGNAQGPGYNMPPSGSMG
MSGDGIMSPDAKPKMDVKDDSGPANEPHKPKLPDVYVNNNSGGGSQQCVSQPPTPGGALP
VPSPLSPSPASLSSYHGDDSDSISSPPWPLKTPSSPKANPNASPFSGERITRLYELGGEP
ERRGWVERYLNFMEERGTPVSQLPTVGKKPLDLWKLYMAVREIGGLAMVNKNKKWRELSS
TLNVGTSSSTASSLKKQYIQYLFAYECKMERGEDPPADNSSSSSSMAGGDNRKQVKIQPP
SPANSGGSLQGPQTPQSSASSSTAEAAGDLKPPTPATTPLGQVTPLPPNRSSVSVQDPFS
EVSDPAFQKRTPALPPSAPYQQGLSMPDMMMRMQYDAKDPFAGMRKMAGADPYIPAQMPG
SGMQDMYGRPPSALSMSQRSQYPYGPGYDRRPDHMMGMEGTMGPPGSQNNMGPSNSEGSM
YSPSRYSSQQRSALSHDGYGQQYSNMPYGMHPSGMYPQQQQGYKRPLDGMYGPPPKRHEG
DMYAMQYTNQQPDMYNHYGSGYSEHRPLQGQFPYPYPRDRMAPSGQSQHSMLGGGPPPNH
AADGPNMWPSRTDLGYPYPSRPGSQMPPYGSMGRDDMDGRPGPEQWHRQSPYMSSSGGMP
PLSSRQPSSYSNSPSMANHLPRAPSPGAFQRSMDSRLSPSKAPFMSPMKMPKPGLAMMGS
QGGGPMGQFPPNLRRDLNYPPGSVEGTLPILKPRRKLTSKDSGTPEAWRVMMSLKSGLLA
ESTWALDTINILLYDDSTVASFNLSQLPGFLELIVEYFRRCLIQIFGILEEFEVGTKKRS
SSPASAQKERPEWDSGSPVQPELSKAEETQVEHAEGVTEEVTPVAAEPAKVNCETEESNM
SVSREDKSGEDGEKEGKEEEEEAAEGEAESVDRPAAEGQPKPKQASKYDKFPIKIVHKED
LRDDMSGYLTEFTSGLRHWQAGGGDSTAHIQTHFEPRSEGPEDEDRRNKSKQENKMDHEK
KQPLKNITATIDDVLCARVDALAYGHPARSLPSYPFRVHPDGEEDHITLLEDEPRCLDEA
PLTTTSAWQDSLSKRCICVSNIVRSLSFIPGNDLDMSRHPALVLLLGRLLLLHHVHPERN
RLPPSFQRDEQQERGLSSSKDEWWWECLSLLRENAMVTLANIAGQLDLSTYPDTICLPIL
DGLLHWMVCPSAEAQDPFPSAGPHSQLTPQRLVLECLCKLSIQEGNVDLLLATPPFSRQE
KLFTVLVRYVGQRKAQVYREMAVAVLSHLAQGDPTAARAIAMQKGSVGNLVVFLEDGVSM
AQYQQNPHSLLHMGHPPMDPPSINMMCRAAKGLLAMAKVQENKKEFVLYESRLLDISISS
VLNVGVVAIICQVLFHLGKL
NT seq
6903 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggctccgaccagaaccaacagcaaaaataagaaactagcc
ggcggtctgggtcccgagctcaattcggggaaatccggaggaggaggtacaggacagcga
acgggaccgatgctggctgctggagatgggactctgaataatgtagataatcaccgccgg
aacgagctcagcatggtccattcaacttccacgagtcacggcgctccggacggacacgac
aaggctgggaataacctcgcgtccgccacggcgtcgactaattcgagcgcttcctcgatg
gagtcgagtttgatcgcgaaccacaagctgaagtgtgcggggagcggagatccccctcag
tctcagccaccgcagcagccgccgccgcaattcggccagtttgcgccacatcagcagcgg
cagatccaaagtaacaacagcgccagtaacaacggccaggtgccccgcggggataggagc
gcggatcaccaacaccacagcggcaaagagaacctgttggggggccaggaggagccacag
cagcagcacatgacagggaaaggtgaaggggagctcacctgtaagccctccgagaggatg
atggccgccaggtacgagcactcgaacttggggccaccgagtaacaactccgagtttaat
aacaactattacactccgaggccctgctacgagcaacatggcgggcagcagcaacaaagc
agcgggatggggataacgcactcttcggcacataacagcatggagaactcccacgaagca
gggtaccacaacagccagtacggccagtatcccgcctaccgagcgggctacggcggcggg
ggctacgggatgatgggcccctctggatgtcggcaacctgggaacatgatgatgggcagc
aactcctctgcgagccacggcaagtctcctttgggagctgcttcggctggcttccagagg
ttcccgggacaaacccagccgcagcagcagcagcagcatccctcgggggcgaccccgacc
ctcaaccaactgctgacgtcccccagcccgatgatgcggggctacgggggtgcttatcag
gactacagtggccctgcggctcagcagcaagccggcatgggcccggggaaagacgtgggg
tcccagtatggagccacttcggcccactggggagggcagcagaggagccatccacacgca
atgaatcctggaaacgcaacgcagggcctcggcaggacgcaggtttcctccatggacttc
atggctatgaagcgctcgcagctgtacggcatgtccaacaatccctactccgccccgcag
cagccgggggccggaccctatccccccagccagccctacgcatcgcctcccccgcatcga
tacccgatgagcctacaggggaggggtcaaatgggcatgggtgggatgcagtatcctcag
cagcagcaggtggtgccatatggccaacaggggatggttggatacagccagcagcagcag
cagcagcagcagcaaggggggcagcagggaacccctccgtacttcagcccccctcatcag
acccctccaggaccaaccccaagctcctacctgcagcctcggccgccactgcaacaggag
gcccagcaggagagctacagcatcaggggtcctaccccagggaattctgggaaggctaac
aatgaggataacgtctcccatgaacgcccctcaagtctgccggatctgtccggctccatt
gacgacctccccaccggggaggctggcctgggctcggccgtcggcgccgggggctcctcc
agcagcagcagcagtagccaaggggagcagggaagcaccggtaaccagggacagtccccc
ttctcccctcacgcctccccgcacctccccagccagaggagcgggccctctccgtccccc
gtcggctccccggccggctccactcagtcccagcagtcccgctcgggttcgggccccatc
tcacctgccagcgcaccctctgccaacacctctgtgccaggttcagccatggccccgcag
agctctggaaacggacctgatggaggtcacccgccaatcacacgctcacctatggctcag
gagagagggttcaacatgcagaggaaccaggctgcctctcagtttgcgtctccacagacc
ggacctcccatgtccccccacccatcgccagggggccccctctactctggagtgggtccg
tactcccagagtggccccgcgggcccttatggaccgcacgcacctcagtatggacaccaa
ggcaactacgcacggccctccaactacagcgggacagccagcaccggctacagtggcccc
ggccccggcgtaaccaacagcctgggcatgaacgctaccagccccatgcacggccagggg
cccggccagcccgtgcccggaggacgcggcccaggcccaggcagccagaacagggtgtac
ccggccatgggtcccacttctcccagcgtaccccagccagctgggcccgggatgggtccc
ccttctttgggtagctctaaccgcaagacccaggaggcggcagcggctgccgtgccggga
tctgccaactcagtgcacaacaggatgcctctgtacacgaggcccccagcccagacgcag
cccacctccacccgctggcccacaccccaccattcctccacctgtccactgccttcaccc
cctccccgacctcatcctccatgcatccattcgcatcaacataggcagagcaactaccaa
ggccccggcatgagccaagccagcgctgtcccctacagtcagccagcgggcagcaacgcc
gcagccacaggcaacgcacaaggtccgggctacaacatgcctccttcaggatccatggga
atgtcaggagacgggataatgagcccagatgccaaaccgaaaatggacgtgaaagatgac
agcggccccgccaacgagccccacaaaccaaagctcccggacgtttacgtcaacaataac
agcggcggcggctcccagcagtgcgtttcccagccacccactccgggcggcgccctacct
gtgccctcccccctctcacccagccccgccagcctctcctcctaccacggagatgacagt
gacagcatcagcagccccccctggcctctcaagactccctccagccccaaagccaaccct
aacgcctctccgttcagcggcgagcgaatcacgcggctgtacgagctcggtggagagccg
gagagacgaggctgggtggagcgttacctgaacttcatggaggagcggggcacacctgtt
agtcagcttcccactgtgggcaagaagccgctggacctgtggaagctctacatggctgtt
cgggaaataggaggcctcgccatggtaaacaagaacaagaagtggcgtgagctgtccagc
accctgaacgtgggtacatccagcagcaccgccagctcgctcaagaagcagtacatccag
tatctgtttgcctacgagtgcaagatggagaggggagaagacccgccagcggacaacagc
agcagtagcagcagcatggctggaggggacaacaggaagcaggtcaagatccagccgcct
tcacctgctaattcaggcggctccctccagggcccacagacgcctcagtcctctgccagc
agctctacagcagaggcagcgggggacctgaagccccccacacctgccaccacccccctg
ggacaggtcacaccactgccccccaacaggagcagtgtgagcgtgcaggaccccttctca
gaggtgagcgacccggccttccagaagcggactcccgccctgcccccctcggctccgtac
cagcagggcctcagcatgcctgacatgatgatgaggatgcagtacgatgccaaggacccc
ttcgccgggatgaggaagatggcaggagccgatccttatattccagcccagatgcccgga
agcggtatgcaggacatgtatggtcgacccccatcagccctgagcatgagccaaaggtcg
cagtacccgtatgggccgggctacgacaggagaccggaccatatgatggggatggagggg
accatgggcccccctgggagccagaacaacatgggaccttccaacagtgagggcagcatg
tactcacccagcagatactcctcacagcagaggtcagcgctctcacacgacggctacggg
cagcagtattccaacatgccatacgggatgcatccatctgggatgtacccacagcagcag
cagggctacaaacgtccgctggatggaatgtacggccccccgcccaagagacacgagggc
gacatgtacgccatgcagtacaccaaccagcagccggacatgtacaaccactatggcagc
ggttactctgaacacagaccgctccagggacagttcccctacccgtacccccgcgaccgt
atggccccctcgggccagagccagcacagtatgctgggcgggggcccccctcctaatcac
gctgccgacgggcccaacatgtggccttcgaggacagacctcggctacccctaccccagc
aggccgggatcacaaatgcccccgtacggctcgatgggcagagacgacatggacgggcgg
cccgggccggagcagtggcaccggcagtctccgtacatgtcatcatcgggcggcatgccc
cccctgtcctcacgccagccgtcgtcttattccaactccccgtccatggccaaccacctg
cccagagcgccgagcccaggggccttccagcgctccatggactctcgactgtcccccagc
aaagcgcctttcatgtcccccatgaagatgcctaaacccggcctggccatgatgggatcg
cagggcggtggacccatggggcagtttcctcctaatctgaggagggaccttaactaccca
ccgggttcagtggagggcaccctgccgattctcaagcctcgacgcaagctaacatccaag
gacagtggaacgcctgaggcctggcgcgtgatgatgtctctgaagtctggcctgctggca
gagagcacgtgggcgctagataccatcaatatcctgctgtacgatgacagcacagtggcc
tcctttaacctctcccagttgcctggattcctcgagctgatcgtcgagtacttccgccgt
tgcttgattcagatctttggcatcctggaagagtttgaggtggggactaagaaacggtcc
tcaagtccagcgtctgcacagaaagaaagacctgagtgggattctggctctcctgtccag
cctgagctctccaaagccgaggagacccaggtggagcatgccgagggcgtcacggaggaa
gtgacacctgtcgctgcagagccggccaaggtgaactgcgaaacagaggagtccaacatg
agcgttagcagggaggacaagagtggagaagatggtgaaaaggagggaaaagaagaagaa
gaggaggcagcagagggtgaagcagagtccgtggatcggcccgcagcagagggacagcct
aaacccaaacaagccagcaaatacgacaagttccccatcaagattgttcacaaagaggac
ctgagggacgacatgtccggttacctcacagagtttaccagcgggctgcggcattggcag
gcgggtggaggcgactccacagcacacattcagacacactttgaaccccggagcgaaggg
cccgaggatgaagacaggagaaacaagagcaaacaggagaataagatggaccacgaaaag
aagcaacctctgaaaaacatcaccgcgactatcgacgacgttctgtgcgcccgcgttgac
gccctcgcttacggccaccccgcgcgctccttgccctcgtaccccttcagggtgcaccca
gatggggaggaggaccacatcaccttgctggaggatgagccacgctgcctggacgaggct
ccgctcaccaccacgtctgcctggcaggactcgctgtccaagcggtgcatctgcgtctcc
aacatcgtgcggagtctgtcctttatccctgggaatgacttggacatgtcccgccaccct
gctctggttcttctgctgggcaggctgcttctgctgcaccacgtgcaccccgagaggaac
aggttacctcccagcttccaaagagacgagcagcaggagcgggggctgtcgagcagtaag
gacgagtggtggtgggagtgtctgagtctgctcagggagaacgccatggtcactctggcc
aacatcgctggccagttggatctctccacttacccagataccatctgccttcccatcctg
gacggcctcctccactggatggtttgcccctcagccgaagcccaggacccctttccgtcg
gctggaccccattctcagctcaccccccagaggctggtgctggaatgcctctgcaagctg
agcatccaggagggcaacgtggacctcctgctggcaacgccgccattcagccgacaggag
aaactgttcacggtcctggtgcgctacgtgggtcagaggaaggcccaggtgtacagggag
atggcggtggctgtgctctcccacctggcacagggagaccccacagcggcgcgtgccata
gccatgcagaagggcagcgtgggtaacctggtagttttcttggaggacggcgttagcatg
gcgcagtatcagcagaaccctcacagcctgctgcacatgggccaccctcccatggacccg
cccagtataaacatgatgtgcagagcagctaaaggcctcctggctatggccaaagtgcaa
gagaacaagaaagagtttgtactgtatgaaagcagattattagacatctccatctcctcg
gtgctcaatgtgggagtggttgccattatttgccaagtcctgtttcacttggggaagtta
tga
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integrated database retrieval system
