Oreochromis aureus (blue tilapia): 116310736
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Entry
116310736 CDS
T07295
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116310736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116310736
03009 Ribosome biogenesis [BR:
oau03009
]
116310736
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116310736
Spliceosome [BR:
oau03041
]
Complex A
U1 snRNP components
U1 related factors
116310736
Complex B
116310736
Ribosome biogenesis [BR:
oau03009
]
Eukaryotic type
Pre-60S particles
Helicases
116310736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
116310736
NCBI-ProteinID:
XP_031583491
Ensembl:
ENSOABG00000015854
LinkDB
All DBs
Position
LG6:complement(27791735..27802389)
Genome browser
AA seq
634 aa
AA seq
DB search
MPGFSDRDRGRDRGRYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKKHWNLDELPKFQ
KNFYQEHPDVTRRPLQEVEQYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMDVIVKQNWT
EPTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAP
TRELAQQVQQVAAEYGRASRLKTTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECG
KTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLK
DYVQINIGALQLSANHNILQIVDVCNDLEKEDKLIRLLEEIMSEKENKTIIFVETKRRCD
ELTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVIN
YDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMA
EDRGGRGRGGRGGYKDDRRDRYSGGGRSNFSGSSYRDSDRGFGNGPKSSFGGSKAQNGGN
YGGNSGNSSGNYGSSNYSNSNGQGNFGAPTNQVGGFGNQSFQGPPQFGGMQRAAQNGMNH
PPFPFNSQPPPPQAQQAPPPPPMVPYTMPPPFPQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtttttcagacagagatcgtggcagagaccgaggaagatatggcggtgggcct
cctcgttttggtggtggaggaggaggcaataggggcggacctcctcctggaaagttcggt
aaccctggggagaggctgcgaaagaagcactggaacctcgatgagcttcccaagtttcaa
aagaacttctaccaggagcacccagatgtcacccgcagaccacttcaagaggttgaacag
taccgaagaagcaaagaagtgacagttaaaggcagagattgtcccaaaccgatcgtaaag
ttccacgaagctgcatttccaagctacgttatggatgtaattgtcaaacaaaactggact
gaaccaactccaatccagtctcaggggtggcccgtagccctgagtggcaaagacatggtt
ggaattgctcagactggctctgggaagacccttgcataccttctgcctgcaattgtgcac
atccaacaccagccattcttggagcatggagatgggcctatttgcttggtgctggcacca
acccgtgagctggcccagcaggtgcagcaagtggcggctgaatatggcagggcctcccgt
ctgaagaccacctgcatctatggcggggcacccaaagggccccaaatcagggaccttgaa
agaggtgtcgagatttgcatcgctactccgggtcgtctcattgatttcctggagtgcggt
aagactaatttgcgtcgttgcacctatctggtgctggacgaagctgaccgcatgctggac
atgggatttgaacctcagatccgcaaaatagtggaccaaattcggccagatcgtcagacc
ctgatgtggagcgccacctggcctaaggaagttcgtcagctggctgaggacttcctgaag
gactatgtccagatcaatattggagcactgcagctcagtgccaatcataacatcctgcag
atagttgatgtttgcaatgaccttgagaaggaggacaaactgatccgtttgctggaggag
atcatgagtgaaaaggagaacaagaccattatttttgtggagaccaaaagacgttgtgat
gagctcaccaggaggatgaggagagatgggtggcctgcaatgggaatccatggagacaag
agccaacaggagagggactgggtccttaacgaattcagatatggcaaagccccgattctc
attgctacagatgtggcctcccgcggcttagatgtggaggatgtgaaatttgtcatcaat
tatgactaccctaactcttccgaggattatatccaccgcattggacgcacagcccgaagt
caaaaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaagccagtgac
ctgatctctgtgctccgcgaggccaaccaggccattaaccccaagctgattcagatggca
gaggacagaggaggtcgtggaagggggggaagaggtggctacaaggatgatcgtcgggat
aggtattctgggggtgggaggagtaacttcagtggtagtagctacagggacagcgacaga
gggttcggcaatgggccgaagagctcctttggtggcagtaaggcccaaaatggtggcaac
tatggaggcaatagtggtaactctagtggtaactatggtagcagcaattacagcaacagc
aatggacagggtaattttggcgctcctacaaaccaggtgggtggctttggtaaccaaagc
ttccagggtccccctcagtttgggggtatgcagagggccgctcagaatggtatgaaccac
ccaccattcccattcaactcccagccaccgcccccacaggcccagcaggcgccgccacca
ccaccaatggtgccctacaccatgccaccacccttccctcagtag
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