Oreochromis aureus (blue tilapia): 116310856
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Entry
116310856 CDS
T07295
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03320
PPAR signaling pathway
oau04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
116310856 (rxrba)
03320 PPAR signaling pathway
116310856 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116310856 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oau03310
]
116310856 (rxrba)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
116310856 (rxrba)
Nuclear receptors [BR:
oau03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
116310856 (rxrba)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
116310856
NCBI-ProteinID:
XP_039461055
Ensembl:
ENSOABG00000019905
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All DBs
Position
LG22:complement(32224142..32247390)
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AA seq
469 aa
AA seq
DB search
MGDSRDSHSPDSSSVSSPPSGQRSPPLVPSAASMTSLPPITSAGVNSPISSIGSPFSVIS
SSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPLGLKQLSSHSPGPML
SQKRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCTVDKRQRNRCQY
CRYQKCLAMGMKREVAKMNDRSVQEERQRNKDRDGEVESTSAVNEEMPVEKILEAEMAVE
QKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGW
NELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRAHNAEVGAIFDRVLTEL
VSKMRDMQMDKTELGCLRAIILFNPDAKGLSNPSEVELLRERVYASLEAYCKQKYPDQQG
RFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcagagattcccacagcccagacagttcgtctgtgtcctccccaccatcg
ggccagcgctcccctccactggttccctcagcagcttccatgacctccctgcctcccatc
accagtgccggggtcaatagccccatcagcagcattggttcccccttttctgttatcagc
tcttcgctggggtcaccctgcctacctggcacaccgtcagtgggttacggcccaattagc
agcccccagatcaactcaacagtgtcgatgtcggggcttcatgcagtgagcagctccgat
gatgtgaaacctccactgggcttgaaacagctgtcatctcacagccctgggccgatgctt
tcccagaaacgtctttgttccatctgtggagatcgatcctctggtaagcattatggcgtc
tacagctgtgagggctgcaaaggtttcttcaaaagaacagtgcgaaaagacttgacctac
acctgtcgggacaataaagactgtactgtggataagagacagaggaatcgctgccagtac
tgccgctatcagaagtgcctggccatgggcatgaagagagaagtggccaagatgaacgac
agatctgtccaagaggagcggcagaggaacaaggatagagatggtgaggtggagtcaacc
agtgcagtcaacgaggagatgccagtagagaagattttggaagcagagatggccgtagag
cagaagacagagctgcatgcagatggaagttcgggcggcagctctcccaatgatccagtc
accaacatctgccaggcagcagacaagcagctcttcaccctggtggagtgggccaagagg
atccctcatttctcagagctgcccctggatgaccaggtcatcttgctacgtgcaggctgg
aatgagctcctgattgcatcgttctcccatcgctccatctcggtgaaggacgggatttta
cttgccacgggcctgcatgtccacaggaacagtgcccacagtgcaggtgttggagctatc
tttgacagggcgcacaatgccgaggttggggccatatttgacagggttttgacagagctt
gttagtaaaatgagagacatgcaaatggacaagacagagctgggctgccttcgagcaatc
attctcttcaatccagatgctaagggtttgtccaaccccagtgaggtggagctcctaaga
gagagggtgtacgcatctcttgaggcttactgcaaacagaaatatcccgatcagcaggga
aggtttgcaaagctcctcctccggctcccggcactgcgctccatcggtctaaagtgcctg
gagcacttgttcttctttaaactgattggtgatacgcccattgacaccttcctgatggag
atgctagaggcgcctcaccagctcacctag
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