Oreochromis aureus (blue tilapia): 116310892 Help Entry 116310892         CDS       T07295                                  Name (RefSeq) collagen alpha-1(II) chain-like   KO K19719   collagen type II alpha Organism oau  Oreochromis aureus (blue tilapia) Pathway oau04510   Focal adhesion oau04512   ECM-receptor interaction oau04518   Integrin signaling Brite KEGG Orthology (KO) [BR:oau00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116310892    04518 Integrin signaling     116310892  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     116310892  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oau00536]     116310892 Glycosaminoglycan binding proteins [BR:oau00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116310892 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Amnionless Motif Other DBs NCBI-GeneID:  116310892 NCBI-ProteinID:  XP_031583676 Ensembl:  ENSOABG00000016309 LinkDB All DBs Position LG20 Genome browser AA seq 1487 aa AA seqDB search MFSFVDSRTVLLLVASQVVLLSVVRCQEEDDQESGGCIQDGQLYNDKDVWKPEPCRICVC DSGAVLCDEIICEEIKECANPIIPSGECCPICPADTSAPFETIGAKGQKGEPGDIADVVG PRGPPGPMGPPGEQGPRGEAGAKGDKGNPGPRGRDGEPGTPGNPGPPGPPGPPGLGGNFA AQMAQGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGPPGEAGEPGPAGPMG PRGPPGPSGKPGSDGESGKPGKPGERGPAGPQGARGFPGTPGLPGIKGHRGHPGLDGAKG ETGAAGAKGEAGAPGENGAPGSMGPRGLPGERGRPGAAGAAGARGNDGLPGPAGPPGPVG PAGAPGFPGSPGAKGEAGPTGGRGSEGPQGPRGEAGTPGSPGPAGASGNPGTDGIPGAKG SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGDPGLPGFKGEAGPKGELGPIGPLG PPGPPGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGAKGVPGDRGVPGAPG AKGATGEPGRTGESGLPGARGLTGRPGDAGPQGKVGPAGTPGDDGRPGPPGPQGARGQPG VMGFPGPKGANGEPGKPGEKGLVGRPGLRGLPGKDGETGPAGPNGPAGPAGERGEQGPPG PPGFQGLPGPSGAPGEAGKPGEPGLPGEGGAPGAVGPRGERGFPGERGGAGPQGLQGPRG LPGTPGSDGPKGAIGPAGSPGTQGPPGLQGMPGERGAAGITGPKGDRGDNGAKGTEGAPG KDGARGLTGPIGPPGPAGPNGAKGETGPTGPVGVTGARGAPGDRGEVGPPGPAGFAGPPG ADGQPGAKGELGERGLKGESGSPGPQGPSGAPGPVGPTGVPGSKGARGAQGPPGTTGFPG AAGRVGLPGPNGNPGPVGPPGPAGKDGPKGVRGDAGPPGRPGDAGLRGPPGLQGEKGEPG EEGKPGAEGPSGPQGLAGSRGIVGLPGQRGERGFSGLPGPSGEPGKQGAPGSAGDRGPPG PVGPPGLSGPAGEPGREGTPGSDGPPGRDGSPGLKGERGNTGPAGAPGAPGRPGPPGPVG PLGKQGDRGDAGTQGPAGPPGPAGARGMAGPQGPRGDKGEAGEAGERGQKGHRGFTGLQG LPGPPGPSGDSGPAGPAGPSGAKGPPGPAGPAGKDGNNGQPGPIGPPGPRGRSGESGPAG PPGNPGPPGPPGPPGPGIDMSAFAGLGQVEKGPDPLRYMRADEASSSARQHDIEVDSTLK SIINQIDNLRSPDGSQKNPARTCRDLKLCHPEWKSGEYWVDPNIGSTADAIKVFCNMETG ETCVYPSIAKVPKKNWWTSKSKEPKHVWFGETMNGGFHFNYAQEGPAGVAASVQLTFLRL LSNEASQNVTYHCKNSMAYLDQASGNLKKALLLQGYNEVEIRAEGNSRFTYNVLEDGCKT HTGQWGKTVFEYKTQKTSRLPITDIAPLDIGGADQEFGVDVGPVCFI NT seq 4464 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggactcaaggactgttctgctacttgtagcatcccaagttgtttta ctatccgtggtcagatgtcaggaagaggacgaccaggagtcagggggttgcatccaggat ggccagctgtataatgataaggatgtgtggaagccagagccgtgtcgtatctgtgtgtgt gacagcggagcagttctgtgtgatgagataatctgcgaggagatcaaagagtgtgccaac cctatcatcccatctggagagtgctgtcccatctgccctgctgataccagtgcccccttt gaaacaattggtgctaagggccagaaaggagaaccaggagacattgcagatgttgtagga ccaagaggaccaccaggccctatgggccccccaggtgagcagggaccacgaggagaagct ggcgctaaaggtgataagggaaatcctggacctcgaggaagagatggtgagcctggcacc cccggaaaccccggcccacctggcccacctggacctccaggacttggagggaactttgct gctcagatggctcagggttttgatgagaaggctggaggagctcaaatgggtgtgatgcag ggaccaatgggtcctatgggtcctcggggtcctcctgggcctagcggagctcctgggcca caaggtttccaagggccccccggagaggctggagagcccggtcctgctggacctatggga cctcgtggaccacctggaccttcaggaaaaccaggaagtgatggtgaatctggcaaacct ggcaaacctggtgagcgtggacctgcagggcctcagggagctcgtgggttccctggaact cctggacttcctggcatcaaaggacacagaggtcaccctggtctagatggagctaaagga gagaccggtgctgcaggagccaagggtgaggctggtgctcctggagagaacggtgcccct ggatccatgggtccacgtggtctgcctggtgagagaggacgtcctggagctgctggagcc gcaggtgcccgtggaaatgatggcttgcctggccctgccggtccacctggaccagtgggt cctgctggagctcccggttttccaggatctccaggagcaaagggagaagctggtcctact ggcggccgtggctctgaaggaccccaggggccacgtggagaggctggtaccccaggatcg cccggacctgctggagcatcgggtaaccctggtactgatggtattcccggagctaaagga tctgctggtgctcctggtattgctggtgctcctggattccccggcccccgtggcccacct ggacctcagggagcaacaggacctctagggcccaaaggacaggctggagacccaggtctt cctggattcaaaggtgaagctggaccgaagggagagcttggccctattggtcctctaggt ccccctggccctccaggggaagaaggaaagagaggtgccaggggagagcctggaggtgct ggaccaattggacctcctggagagagaggagcccctggaaaccgcggtttccctggacag gatggtcttgctggcgcaaagggtgtccctggagaccgtggtgttcctggtgctcctggg gctaaaggtgctactggagaacctggacgtacaggagagtctggtctccctggagccaga ggtcttactggtcgtcctggagatgctggtcctcaaggcaaagttggacctgctggtacc cctggtgatgatggtcgccctggcccacctggtcctcagggagcccgtggtcagccagga gtgatgggattccctggaccaaagggagccaatggtgagcctggaaagcctggagagaag ggactggtgggtcgcccaggtctgagaggtctgcccggaaaagatggagagactggtcct gctggccctaatgggcctgctggacctgctggagagagaggagaacaaggacctcctgga cctcctggcttccagggtctacctggaccatctggtgccccgggagaggctggaaaacct ggagagccgggtcttcctggagagggcggagctcctggtgctgttggacccagaggcgaa cgtggtttccctggtgagagaggtggtgcaggaccccagggtcttcagggacctcgtgga cttcctggaacaccaggcagcgatggacccaagggagctattggaccagctggctctcct ggaacccagggacccccaggcctgcaaggtatgccaggagagagaggagctgctggtatc acaggacccaagggagacagaggtgacaatggtgcaaaaggaactgagggtgctcctgga aaggatggtgctagaggtttgactggtcctattggtcctcctggcccagctggacccaat ggtgccaagggtgagactggacctactgggcctgttggtgttactggtgctcgtggtgct cctggtgaccgtggtgaggttggtcctcctgggcctgctggttttgccggacctcctggt gctgatggtcagcctggtgctaagggagagcttggtgagcgtggactgaaaggagagtct ggttctcctggacctcagggaccatctggtgctcctggacctgtgggacctactggtgtt cctggatctaaaggagcacgtggtgctcagggacctcctggtaccacaggtttccctggt gctgctggcagagttggacttcctggtcctaatggtaaccctggccctgttggtcctcct ggccccgctggtaaagatggaccaaagggtgttcgtggtgatgccgggcctccaggaaga ccaggagatgctgggcttcgtggaccaccaggcctacagggagagaaaggagagcctgga gaggaagggaagcctggtgctgaagggccctcaggtccccagggtttggctggctcccgt ggtattgttggtttgcctgggcagcgtggagagagaggcttctctggtcttcctggacct tctggagagcctggtaaacagggtgctcctggttctgctggtgaccgcggacctcctgga ccagttgggcctcctggacttagtggacctgctggggagcctggtagagagggtacccct ggatcagatggaccccctggtagggatggatctcctggactcaagggagagcgaggtaac accggtcctgctggcgctcccggagctcctggccgccctggtccccctggccctgtagga cccctgggcaagcagggagacagaggagatgctggtactcaaggacctgcaggaccccca ggaccagctggggctagaggaatggctggaccccaaggaccacgtggagacaaaggagaa gctggagaggctggagagagggggcagaagggtcaccgtggcttcactggtctgcagggt cttcccggaccccctggtccctctggagattctggacctgccggacctgcaggaccaagc ggcgctaagggaccccctggaccagccggacctgctggcaaagatggaaataatggacag cccggccccattggacctcctggacctcgtggacgctctggagaatctggtcctgctggt cctcctggtaatcccggacccccaggtcctcccgggccacctggccctggcatcgacatg tctgcttttgctggcctgggtcaggtggagaagggccccgatcctctcaggtacatgagg gctgatgaggcatccagctctgcgaggcagcatgacattgaggtcgattcaacactaaag tccatcatcaaccagattgataacctgcgaagccctgacggctcacagaagaatcccgct cgcacctgcagagacctcaaactgtgccatcctgagtggaagagcggtgagtactgggtt gatcccaacattggcagcacagctgatgccatcaaggtcttctgtaacatggagaccgga gagacctgtgtctatccaagcatcgccaaggtaccaaagaagaactggtggacgagcaag agcaaggaacccaaacacgtctggtttggagagacaatgaatggaggattccatttcaac tacgctcaggaaggccctgctggcgtcgctgccagcgtccagctgaccttcttgaggctt ctgtccaatgaagcatcccagaacgtcacttaccactgcaagaacagcatggcctacctg gaccaggccagcggcaacctgaagaaggctctgctgctacagggttacaatgaggtggag atccgtgcagagggcaacagtcggttcacttacaatgtgttggaggatggctgcaagaca catacaggccagtggggcaagactgtctttgagtacaaaacacagaaaacctcccgtctg ccaatcacggacattgctcctttggacatcggaggagcagatcaggagttcggagtggat gtaggcccagtctgctttatctaa

DBGET integrated database retrieval system