Oreochromis aureus (blue tilapia): 116311078
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Entry
116311078 CDS
T07295
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03013
Nucleocytoplasmic transport
oau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116311078 (srrm1)
03015 mRNA surveillance pathway
116311078 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116311078 (srrm1)
03041 Spliceosome [BR:
oau03041
]
116311078 (srrm1)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116311078 (srrm1)
Spliceosome [BR:
oau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
116311078 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
116311078
NCBI-ProteinID:
XP_031583954
Ensembl:
ENSOABG00000017116
LinkDB
All DBs
Position
LG19
Genome browser
AA seq
867 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKTMQINLTGFLNGKNARDFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDEEKKEKDLRERAQSKSPRRRKTRSPSPRRRSP
SPRRRSPAKRERKRSPSRSPRRKQASPVGGSSPPPPLMQLSTKSSEQPVEPDTSGRAVPE
AVVHEASSTCETVVEVVKADSVNEVKEQSPEKTLKKEERPRSREREKDTRRERHHRSRSH
SRSRRRRSRSRSYSPRRRQSPRRRMSPRRRSPPRRAPASARHRHRRSPVRRRRSRSASSS
GSSSSGSRSPKKAVKRISTTPPRKQVHHPDTSISPTGKNRRSPSPRARRGRGSPSPPRSS
GFKRKQGGRADSPPDNVKPRPSEGSESEEDKNEKGATADSVQQRRQYRRQNRQSSSETGS
SSSEDEAPKRATGGSGARNGEVRRRRSRTPSPRRRHRDPSPRKRRSPSPVRRRRTPTPPR
RRRSPSPPQRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPSQKRKLSNSPMKRSSPAT
RRRPSRSPRHRSSPPPRRRSPPSSSSPPRHRRSPMLPPGRRSRDARSPVAASRRLSPSPA
NRSHAVRGSTTPPRRYETSSTSPSNQRRQQSPPHNKVIRRVSRTPERRDNQRPSPSPQPI
RRASSRSVSPEPAAQKRPTQASASPSPSRSASASPPPAKKASSGSGSRSPSKTSDVDGSA
KKKKKKKEKKHKKEKKHKKHKKHKKEKSSGAAVTGDTQENQAAEEDRDSRKESDSDVENT
LDDLEKHLREKALRSMRKAQMSPSQMS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacgagtgcggagcaggacaaccgcttcagcaacaag
cagaagaaactgctgaagcagctgaaatttgcagaatgtttggacaaaaaggtggacatg
accaaagtgaacctagaagtcatcaaaccttggattacgcagcgagtcaccgagattttg
gggttcgaggatgacgtcgtcatagagttcatatttaaccagcttgaggagaagcaccca
gatagcaagacgatgcagatcaacctgacaggctttctgaacgggaagaacgcccgggac
tttatgaaggacctttggcccctgctgctgagcgcccaggagaacattgccggcatcccc
tcagcttttctggaacagaagaaagaggaaatcaaacagagacagattgaacaggagaaa
cttgcttctctgaagaaggtggatgaggaaaagaaggaaaaggacctcagagaacgggct
cagtcaaagagccccaggaggcggaaaacgaggtcaccatcaccgcgaaggaggtcgcca
tcaccacggaggaggtcaccagcgaagcgggaaaggaaacgcagcccctcgcgctcacca
aggcgcaaacaagctagtccagttggtggcagttcaccccctccgcccctgatgcagctg
tccacaaaatcttcggagcagccggtagaaccagatacttcaggaagagctgtgccagag
gcagtcgtccatgaagcttcttccacctgtgagacagttgtggaagtagtgaaagccgac
tctgtgaatgaagtcaaagaacagtcgccagagaaaacccttaagaaggaagaaagacca
aggtcgcgagaaagggagaaggacacgaggagggaaagacaccatcgctcacgctctcat
tcccgctctcggagacgccgctcgcgctctagatcgtactcccctcgcagaagacaaagt
cccagaaggagaatgtctcctcgtcgtaggagccctcctcgacgtgcaccagctagtgcc
aggcacagacacaggcgttcccccgtccgcaggaggcgctcccgctctgcttcatcctct
ggtagcagctcatcaggctctcgctcgcctaaaaaagcagtgaaaagaatatctaccaca
ccaccccgaaaacaggtccatcatcctgatacttccattagtcccacaggcaagaacaga
cgatcgccgtctccacgagctagaaggggccggggctctccttccccacccagatcatca
gggtttaagagaaaacaaggaggaagggctgattctccccctgacaacgtcaagcccaga
ccatctgaaggctccgagtcggaggaggataaaaatgagaaaggggcaacagcagattcg
gtgcagcagcgacgtcagtatcgcaggcagaaccgacaatcgtcttcagaaacggggtct
tcatcctcggaagatgaggcgcccaagagggcaacaggagggtcaggtgccagaaatggt
gaggtcaggaggaggcgcagtcgtacaccgtctcctcgaaggcgacacagggatccctct
ccgaggaaaagacgttctccatctccagtacgcagacgtcgcacccctactcctcctcgc
cgtcgcagatctccctctcctcctcaaagacgcaggtctccttccccaccaccccgtcgt
agatctccatcccccagacgatattctccccctatccaacgtcgctacagcccttcacct
ttgccttctcagaagaggaaactgtctaactcacccatgaaacgctcttcaccggctacc
aggcgacgtccctccagatcccccagacacagaagctctcctcctccaagaagacgatcc
cctccctcctcttcatctccacccagacacaggaggagccccatgctgccaccggggcgg
cgaagcagagatgcacgatcccctgttgcagcatccagacgcctctccccatcccctgca
aaccgcagtcacgctgttagaggatccacaacccccccacggcgctatgaaacctcgagc
acatctccgtctaaccagcgcagacagcagtcacctccacacaacaaagtcatccgcaga
gtttcacgcaccccagaacgccgtgacaaccagagaccgtctccaagccctcagcctata
agaagagcatcctccagatctgtttcccctgaaccagcagctcagaaacgtccgactcaa
gcatccgcctccccctccccgtctcgctctgccagtgcatctccaccaccagccaagaaa
gccagcagcggttccggaagtcgatctccaagcaagacttcggatgttgacggcagtgca
aagaaaaagaagaagaagaaggaaaagaaacacaagaaggagaagaagcataagaagcac
aagaagcataagaaggagaagagcagtggtgctgctgtgactggagacacacaggagaac
caggctgcagaggaggacagagattccagaaaggaatcggacagcgacgtggagaacacc
ttagatgatctggaaaagcaccttagagagaaagcgctgcgctccatgaggaaggcccag
atgtctccatcacagatgtcctga
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