Oreochromis aureus (blue tilapia): 116311128 Help Entry 116311128         CDS       T07295                                  Symbol rfc1 Name (RefSeq) replication factor C subunit 1   KO K10754   replication factor C subunit 1 Organism oau  Oreochromis aureus (blue tilapia) Pathway oau03030   DNA replication oau03410   Base excision repair oau03420   Nucleotide excision repair oau03430   Mismatch repair Brite KEGG Orthology (KO) [BR:oau00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     116311128 (rfc1)    03410 Base excision repair     116311128 (rfc1)    03420 Nucleotide excision repair     116311128 (rfc1)    03430 Mismatch repair     116311128 (rfc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:oau03032]     116311128 (rfc1)    03400 DNA repair and recombination proteins [BR:oau03400]     116311128 (rfc1) DNA replication proteins [BR:oau03032]  Eukaryotic type   DNA Replication Elongation Factors    RFC (replication factor C)     116311128 (rfc1) DNA repair and recombination proteins [BR:oau03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     RFC (replication factor C)      116311128 (rfc1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RFC1 AAA_lid_RFC1 BRCT AAA PTCB-BRCT AAA_22 AAA_30 AAA_5 RuvB_N BRCT_2 Rad17 AAA_14 AAA_33 AAA_17 AAA_18 AAA_16 nSTAND3 AAA_7 RNA_helicase NTPase_1 AAA_19 Motif Other DBs NCBI-GeneID:  116311128 NCBI-ProteinID:  XP_031584021 Ensembl:  ENSOABG00000000725 LinkDB All DBs Position LG6 Genome browser AA seq 1173 aa AA seqDB search MDIRRFFAPTSAKPAVQKPAPNGNDKQEKKKKNSSSTDEEVKKKKKEANKVKSKKSEEQR KDGEKKRKKHAVIASDSDEEEPVRKSKSPKEKAKTNKKDPVQYVSETDSDSDNFQSLKKT SKSKQNGAAKTTKADAASSRLEAKQSGKSPVKPSSTQGKTTPKSPPVPSTPKSAPPPQPK QTPTSVLDYFGSASVQRSDKKLVASTKRKAPTLADDLISDEEIARQLQMEEDMELEKQVH EDEEFARTLAMLDEEPKAKKARKGSDEKQILTTSPKKKATDAAAPGSSSKTSVSEDVVSP SPKKTTAPVKASSKLAMMKKKDDDKNEGVKNKTPTKMKISPKKEPHASSISEKTFTPKTG TTPTALKTSPKKPESTSTSPDDQEKKKANSSAYRNFLNRDGPRALGSKEIPKGAENCLEG CVFVLTGVLESMEREDAKSLIERYGGKVTGNVSKKTTYLIQGRDSGASKLEKAESFGTQI LDEDGLLELIRTKPGKKSKYEIAAEAESKTTKTKTPPSQASKSTPKAQKISPSKGNSRSP HTPSPSKTGQAQGRGTKTRDGRTPPGRGSGQTARRELGLSSCTSSSSVPEQSSPSPTEEG GSLLWVDKYRPRSLKAVIGQQGDQSCANKLLRWLQNWYKNHGSGSGKPAAARFGKFGGKD DGSGFKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVVAESLNNTSI ENFYKGTSQTVSSKHVLIMDEVDGMAGNEDRGGIQEMIGLIKNSKIPIICMCNDRNHQKI RSLANYCFDLRFQRPRVEQIKGAMMSIAFKEGIRIPPPALNEIILASNQDVRQVIHNLSM WSAKDKVMTYDQCKSDAASARKDMKLGPFDVCRKVFASGEETARMSLIDKSDLFFHDYSL APLFVQENYLHVRPAAAGGNLKSHLVLLSKTADSICDGDLVDRRIRSGQNWSLLPTQAIY ASVLPGELMRGYMNQFPIFPSWLGKNSSTNKHSRIMQELSSHMSLKTLSSKQAVNLDYLH YLRQAILNPLQKHGAEGAAEAVQLLDDYQLIKEDVDSIMEISVWGGQPDPYSKLDSKVKA AFTRAYNKEVHLTPYSLQVVKKGRRGGGGDFEGGEEISQEDPESEDEGEGLKADAMIKQK KAKPTKESNKEKKEDSGKGKGKGKGKGKGKAKK NT seq 3522 nt NT seq  +upstreamnt  +downstreamnt atggacatcaggcggttctttgcaccgacatcggctaagcctgcggtgcagaaacctgcc ccgaatggaaatgacaaacaggagaagaagaagaagaattcctcgtcaacggacgaggag gtgaaaaagaagaagaaagaggccaacaaggtcaaaagcaaaaaaagtgaggagcaacgc aaggatggggagaaaaaacgaaagaagcacgcagtcatagcctcagactcagatgaggag gagccagtgaggaagtcgaaatcccccaaagagaaagcgaaaacgaacaaaaaagatccc gtgcagtacgtctctgaaacagactcagacagcgacaacttccagtccttgaagaagact tccaaatccaaacagaacggcgctgcaaaaacaacaaaagcggacgccgcgagctctcgt ctggaagccaaacagtcggggaagtctcccgtcaagccatcctccacccagggaaaaacc acaccaaaatctcctcctgtgccttccaccccaaagtcagctccgcctcctcagcccaaa caaacccccacatcagtactcgattactttggcagcgcgagtgttcagcgctcggacaag aagctggtagccagcaccaaacgaaaggctccgactctcgcagacgacctgataagcgat gaagaaatcgccaggcagctgcagatggaagaggacatggagctggaaaaacaggtccac gaggatgaggagtttgccagaacgctggccatgctggatgaagagccaaaagcgaagaag gctcgcaaaggctctgatgaaaaacaaatcttgaccacgagccccaaaaagaaagccaca gacgctgccgcccctgggagcagctcgaagaccagcgtgtctgaagatgtggttagtccg tctcccaaaaagaccacagctcctgtaaaagccagctccaaactggccatgatgaagaaa aaggatgatgacaagaacgaaggggtgaagaacaaaacccctactaagatgaaaatttct cccaaaaaggagccccacgcttcatccatctcagagaagacgttcacccccaaaactgga accacgcccaccgcactcaagacttctcccaagaaaccggagagcacgagcacaagccct gatgaccaggagaagaagaaggccaactcttcagcttacaggaacttcctgaacagagat ggaccacgagctctgggctcaaaggaaatcccaaagggagcagaaaactgtttggagggc tgcgtgtttgtcctgaccggcgtcctcgagtccatggagagagaagacgccaaatctctc atcgagcgatacggaggcaaggtgacgggcaacgtcagcaagaagaccacctacctgatt cagggccgagacagcggtgcatcgaagctggagaaggcggagagcttcggcacccagatc ctcgacgaagacggtctgttggagctgatcagaaccaaaccaggaaagaagtccaagtat gagatcgctgcggaagctgagagcaaaaccacaaagaccaagacgcctccaagccaggct tcaaagagcaccccgaaggcccagaagatctctccctctaagggtaattccaggtcacct cacaccccgagcccttcaaagactggccaggcacaaggccgcggtaccaagaccagagac ggaaggactccacccgggagaggctcgggtcaaactgcgcgaagggagctgggcctttcc tcttgtacctcttcttcttctgtcccagaacaatcatctccatcacccacagaagagggt ggcagcctgctgtgggtggacaagtaccgtccacgctctctgaaggctgtgattggccag cagggcgaccagagctgtgcaaacaagctgctgcgctggctgcagaactggtacaaaaac cacggcagcgggagcggcaaaccagcagcggctcgatttggtaagtttggagggaaagat gatggctcaggattcaaagccgctctgctctccggaccgccaggggtggggaagaccacc acagctgccctggtctgcgaggagctgggcttcagttatgtggagatgaacgccagctgc actcgcagcaaaaacagcctgaaggaggtcgtcgccgagtcgctgaacaacaccagcata gagaacttctacaaaggcacgtcacagacagtgagcagtaaacacgtgctgatcatggac gaggtcgacggcatggcaggcaacgaggaccgcggaggaattcaggaaatgatcggcctt attaaaaattcaaagatccccatcatctgcatgtgcaatgatcggaaccaccagaagatt agatctttagccaactactgcttcgatctgcgcttccagagaccgcgagtggaacaaatc aagggagccatgatgtccattgctttcaaggagggaatcaggatcccgcccccagctctt aacgaaatcattttagcctccaatcaggatgtccgacaggtgatccacaatctcagcatg tggtcagccaaggacaaggtgatgacgtacgaccagtgcaagtccgacgcagccagcgca cgcaaggacatgaagctcgggccgtttgacgtctgcaggaaggtgtttgcctcgggggag gagacggcccgcatgagcctcattgacaagtcggacctctttttccatgactactcgctg gcgccgctgttcgtccaggagaactacctgcacgtgcgcccagctgctgcaggtggcaat ctgaagtcccacctggtgttgctcagtaagacggctgactccatctgtgacggcgatctg gtggatagacggatccgctcaggacaaaactggtcactgctacccacccaggccatttat gccagtgtgttaccaggcgagctcatgagaggctacatgaatcaattcccgatcttcccc agctggctcggcaagaactcctcgaccaataaacactcgcgtatcatgcaggagctgtcc tcgcacatgagtttaaagacactgagcagcaaacaggcggtcaacctggattacctgcac tacctgcgacaggcgattctaaatccactccagaagcacggagcggagggcgctgccgaa gccgtgcagctgctggacgactatcagcttatcaaggaggacgtggacagcatcatggag atcagcgtctggggaggacagcccgacccctactccaaactggactccaaggtaaaggcc gcctttacgcgggcatacaataaagaggtccacctaacaccatactccctgcaagtggtg aagaaaggccgccgtggtggcggaggggactttgagggaggggaggaaataagccaggaa gatccggagtctgaagacgaaggagaggggctcaaagccgacgctatgattaaacagaag aaggccaaacccaccaaggagtcaaacaaggagaagaaggaggattctggaaagggcaaa ggcaagggcaaaggcaagggcaaaggcaaggctaagaaatga

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