Oreochromis aureus (blue tilapia): 116311138
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Entry
116311138 CDS
T07295
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116311138 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116311138 (zcchc7)
03016 Transfer RNA biogenesis [BR:
oau03016
]
116311138 (zcchc7)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
116311138 (zcchc7)
Transfer RNA biogenesis [BR:
oau03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
116311138 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
116311138
NCBI-ProteinID:
XP_031584033
Ensembl:
ENSOABG00000006760
LinkDB
All DBs
Position
LG6:complement(22703215..22755898)
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AA seq
647 aa
AA seq
DB search
MYSVYQDRERLEDDLYQEEEEDSDGSEANSEVEFHLYSQLHYSSNPGELEEQEGEEEQNH
EREDTRQNKVTDGDRGLEEQTGIKALTPTNGSLQQHLKQKKKKEKKDKLKKKKKSDSKGQ
RLPSSLFEEVIVIDSGPDVISISDDDSAEGDEGICALKGRGMQTSTPLQQGGQKRKRTPS
VPVTVESSSSESDSEESESESESDSSDSDGLESWMILGQGNQVGDHSISLNLEGGSHSES
DADAEGETWLVSDKDKEAQIYNKRKGVRIAVQRVSNRYYTDKNVNCRNCNNLGHLSKNCP
EPKKLPPCILCGTPGHPARDCPKRHCNNCGLPGHLYDSCSEKSYWNRQCSRCNMTGHYVD
ACPEIWRQYHRTTKNGPPVKQQPKGSSHSHAYCYNCSMKGHFGHACIQRRMFSGVHPTTS
LINHYDTVQDISNRQHRIKIRVKDLKKNGCFQSFSETLFTPGPPKKKRKISFHKTNHQSN
HTPQHTPNNHNPRPSHLFFNDNDLSAATPKTKKFNKYKQQESVGNVKPWKPKRPVPTSRN
PLPAAKPLFDEAEDFPRGGGMGENRKKRRRKKKMNHVPSAQPGGHTEKRPNPLFGSVGGK
VYGPKAKQEKRKKRKNQAPATADKKTGAQMYPAEDNLFFIKQRKRRR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtgtctaccaggaccgggagagattggaggatgatctctatcaagaggaagaa
gaggactctgatgggtcagaggccaacagtgaggtggagttccacctttatagccagctc
cactactcatccaaccctggggaactagaggagcaggagggtgaagaagagcagaaccat
gaaagagaggacacccggcagaataaggttacagatggtgatagaggactagaggaacaa
acaggcatcaaggctctgacacctactaatggcagcctgcagcaacacctgaagcagaag
aagaagaaagagaaaaaggacaaactgaagaagaagaagaaaagtgactctaaaggtcag
aggttgccatcatcacttttcgaggaggtcatcgtgatcgactccggccctgacgtcatc
tcaatctctgacgatgacagcgctgaaggtgatgaagggatctgtgctttaaagggtcga
ggcatgcagacttccaccccattgcagcaggggggtcagaaaaggaaaaggactccaagt
gtgcctgtgactgtggagtccagcagttcagaatcggattcagaagagtcagaatccgaa
tctgagtccgattcatctgattcggatggcctggaaagctggatgatcctcggtcaaggg
aaccaggttggcgaccactccatctcactcaacctggaaggagggtctcacagcgaatca
gatgctgatgcagaaggtgaaacttggttggtttcagacaaagacaaggaggctcagatc
tataacaaaagaaaaggtgtcagaatagcagtgcagcgggtgtcgaacagatactatact
gataagaacgtcaactgccgaaactgcaacaatttaggacatctctccaagaactgtcct
gagcctaaaaagttgccgccctgcattctttgtgggactccaggccacccagcccgtgac
tgtcccaaaaggcactgcaacaactgtggcctgccagggcatctttatgattcctgcagt
gagaagtcatactggaacagacagtgtagtcgctgcaacatgacgggacactatgttgac
gcttgtccagagatctggagacagtaccacaggacaactaagaatggccctcctgtgaag
cagcaaccaaagggcagcagtcattctcatgcctactgctacaactgctcgatgaaggga
cactttggccatgcatgtatacaacggaggatgttcagtggagtgcatcccacaacctca
ttgattaaccactatgacactgtgcaagacataagcaacagacaacacaggataaagatc
agggttaaagatttgaagaaaaatggctgttttcaatccttttctgagacccttttcaca
ccaggacccccaaagaagaaacggaagatcagctttcataaaaccaaccaccagtccaac
catacccctcagcatactcctaacaaccacaatcccaggcccagccatttattttttaat
gataacgacttaagtgctgcaacacccaaaacaaaaaagtttaataagtacaaacaacag
gaaagtgtaggcaatgttaaaccatggaaacctaagagacctgtgcccacctcgagaaac
ccgctgccagccgctaagccactttttgatgaagcagaagactttcccagagggggaggg
atgggagagaacaggaagaagaggagaaggaagaagaaaatgaaccatgtcccttcagca
cagccagggggacacacagagaaaagacccaaccctctctttggctctgttggcggaaag
gtgtatgggcctaaagcaaagcaagagaagagaaaaaagaggaaaaatcaagcccccgcg
actgctgacaaaaaaactggtgcgcagatgtaccctgcagaagataatctgttcttcatt
aaacaaagaaagcgtagaagatag
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