Oreochromis aureus (blue tilapia): 116311162
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Entry
116311162 CDS
T07295
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116311162 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oau03400
]
116311162 (fancc)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
116311162 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
116311162
NCBI-ProteinID:
XP_031584062
Ensembl:
ENSOABG00000019180
LinkDB
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Position
LG12:15462058..15499532
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AA seq
583 aa
AA seq
DB search
MSEQQPLSQPLQTEEPLLNDQEMQFWLDKAVAWGQADSPDTQKDTCLHMSRLRDFLQQLL
TQVNSMSSTTETMKRLPFLGQLLGRLCWNPYVTVCDTSRGLLLGCLWELYSERPSNAVEQ
KANQWIRKVLCQLSTEEEDTAAQALMKCTGVPAKEYHLKVLRKKVALLQENVGQSCTLFN
SQRCSCDRIVAISEACIPIVACPEASSLISLLLQRPVACVTEVLSEDFLDALTSAYSRQG
LALEEQALVSLWYHSFSSLEEAVLSLLQSVITTGLTPQKLEQQVAQSLLPKACAQHCSVF
LVVNDIFRSALKQAEGNEFVKALVQTFTKCFLKELALLKPQTSISVKAFFPQSPSSLLVP
LLTMPSEMPQGAWRNHLNWLSSSLQRLTEEEEEGDGDGRSTRGHHNVFEAWFLLVQCAHW
VQVAVQLLVTSGTEDGDPFLWLLIFYHYPTNRWHHRASQLARAKEAWNHIRTLFSGAAHP
LPSDRLQSLVTLVSPQPEQQSLAPSLTVSLLVNVAVFCQLSPSGSAEVLQAVVDQSGLLD
EAACVLSSLELRLNEGSCLSRDTVHLRIKELQKTITQMHSDGT
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcagcagccactgagccagcccctgcaaactgaagagccattgctgaatgac
caggagatgcagttctggctggacaaagcagtggcatggggccaggctgacagtccggac
acgcagaaagacacctgcctacatatgagcagactcagggatttcctccagcagcttctc
acacaagtgaacagcatgagctcaacaacagaaaccatgaagaggctgcccttcttaggc
cagcttttgggccggctgtgctggaatccttatgtcactgtgtgtgatacaagcagaggg
ctgctgcttgggtgtctttgggaactgtactcagagcgtccaagcaatgctgtggagcaa
aaagccaaccagtggatacggaaagtgttgtgtcagctttccacagaagaagaagacact
gcagcacaagcgttaatgaagtgtacgggtgtaccagctaaagagtaccaccttaaagtc
ctgagaaagaaggtggcgctgctgcaggaaaatgttggacaaagctgcacattatttaac
agtcagaggtgttcatgtgacaggattgtggctatatcagaggcatgcatccccattgtc
gcttgtcccgaggcatcttctctcattagtctattgctacagcggccggtggcttgtgtc
acagaagttctcagtgaagactttctggatgctttgacctctgcttactcaaggcagggt
ttggcattggaggagcaggccttggtatctctgtggtatcacagcttctccagcctggaa
gaagcagtcctcagtctgttgcagtctgttataactacagggttaacaccacagaagcta
gagcaacaagtagcacagtcactgctgcctaaagcttgtgctcagcactgctcagtattc
ttggttgtaaatgacatctttaggtccgcccttaagcaagctgaaggaaatgagtttgtt
aaggctctggtccaaacctttaccaagtgtttcctgaaggaactggcgctgctgaagcct
cagacaagcatatctgtgaaagccttcttcccacagtcgccttcaagtctgctggttccc
ctcttgacgatgccatcagagatgcctcagggggcttggagaaatcacctgaactggctg
agcagctcattacagagactgacagaggaggaagaggagggagacggagacggcagaagc
accagggggcaccacaacgtgtttgaggcctggttcctgctggttcagtgtgcccactgg
gtacaggtggctgtccagctgctggtcacatctgggactgaagatggtgatcccttccta
tggctgttgatattctaccactaccccaccaacaggtggcaccacagagcttcacagctg
gcacgggccaaagaagcttggaaccacatacgcactcttttctcgggcgcagctcatcct
cttcccagcgaccgcctgcagtcactggtcacgctggtttcaccacaacctgagcagcaa
tcacttgctccatcattgactgtcagccttttggttaatgttgccgttttctgccagcta
tcaccaagtggctcagcagaggttttacaggcggtggtggatcagtctggtctgcttgat
gaagcagcatgtgttctcagctcactggagctcagactaaacgaaggaagctgtttatca
agagacacagttcatctaaggatcaaggaacttcaaaagacgataacgcaaatgcattca
gatgggacataa
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