Oreochromis aureus (blue tilapia): 116311394
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Entry
116311394 CDS
T07295
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116311394 (taf1c)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
116311394 (taf1c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
116311394
NCBI-ProteinID:
XP_031584356
Ensembl:
ENSOABG00000005596
UniProt:
A0A668SAY6
LinkDB
All DBs
Position
LG7
Genome browser
AA seq
1076 aa
AA seq
DB search
MDYQFPQELFPSFYNCGPPNLVQKHNAGGWGSYDRVKPQVGSGPLSTWTFTSRHQVRGEL
WRQVEPVPVPLLAPKHTILSPLTPPDPMNFTEHMNNFFIDHSLDAFGCMSNILSEHFSFK
LKGQKEKYFKDAVRMGRVTYFLDLLKVKMCEQKYPCQKLARHSCQLYDVVHSIPPELLGS
LLYDELAEQRDHLLFSERTTGGALSFVPFSQSDGGSRRGCLLYPGNPALNTLNFHKVELQ
HNRGGPFCVDTSSKPFSFPLRGAVRQISTASLFGECCVAVRSDYLCGVWRFSERNEPQAL
QVVSTSEVATCISASPHVLGEVLVASESGAANLWTVGKGMQKVRFEDSNLYFNAKSPWRW
CEFTAHPRVVLYADRTGVDLTDIRVSPASCHTLFRISSTAECRSGERLVLSRYLGDSHSF
HHLITTQYSAYIMDERFPCVPMLKWDHMMTSPPIFCHIVPGCASSGLSADEATTKVLLSS
HSSQEMMMLQYAGGRGDACFSRGPPQALLRPRDSLKHLPVQIPHRLDVATNRLSSYVAGL
TCIQKAAEGGGGGEECMCVLQLTEAGDIFYQILEHEQPDADESQPQAEEGGLKPRQQIRP
GPTTRARKTAESLPPDSQMIISETSSDEDVVGPTQCPSRIVPETPERGRQASSSSEDSES
EMNRNRRRLQLQVVVNDDSGAEEEIGFDVDVNDKAVEVEETVSGASQRKTPAKLSSGALV
TWKHWLQKLMHKTYENKPRSHLLQHFRANTQGLLCIPEGDQGTSRQDHGVQSLRKELRLG
MSRRSLLVHSMVSTSLRPPHVVPLPNQFNTNVWTDPLSHRLTLSWQGEDAWRKWWKDQLG
FTKEAKVQALRRKRRKEKAAKQATGRRLNLSASFTSSVSYQSALDDLSDSAGWSSGVSQG
AWSDTEDRGRLSQFLSMLDDETSRAATPSTVLNDTPTATPTPTPTATPQRDKLGDPSRTT
TLPQTQTLGLDSTPASQRRSKRPADDYLKSLFAPQDDPSQSHYLDEGSSTNPFLASSQLP
SSQSIPLRNYSVNLTRMNFGSPGSSQSKSQTYSQSQSSQGRLSQASQPKKKSRMGF
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggattaccagttcccccaggagctttttccatcgttttataactgcgggccgccgaat
ttggtgcagaaacacaatgctggaggctggggcagctacgaccgggtcaaacctcaggtt
ggttctggtcctctctccacctggactttcacatccaggcatcaggtcagaggggagctg
tggcgtcaagtcgagcctgtgccggtacccctcctggctcctaaacacactattctttcg
cctttgacgcctccggatccgatgaacttcacggagcatatgaataatttcttcatagat
cactccctggacgcctttggctgcatgagcaacattctgtccgaacacttctcctttaag
ttaaaagggcaaaaagagaaatattttaaggatgcagtgaggatggggagggtgacctac
ttcctggatttgctgaaggttaaaatgtgcgagcagaagtatccctgccagaagctggcc
cggcacagctgccagctgtatgatgtggtgcactccatccctccagagctgctcggctca
ctgctgtacgatgagctggcggagcagagggaccacctgctgttctccgaaagaaccaca
gggggtgctctgagtttcgttcccttttcacagagtgatggtggctctcggcgtggctgc
ctcctctatcctggaaaccctgcactgaataccctcaactttcacaaggtggagctgcag
cacaacagaggcggtcctttctgtgtggataccagcagcaaaccgttcagcttcccgctc
agaggcgccgtcagacagatcagcaccgcctcgctgttcggcgaatgttgtgttgctgtg
cggtcggattacctctgtggtgtttggaggttcagtgagagaaatgagccgcaggcactc
caggtggtcagcacgtcggaggtcgcgacctgtatcagtgccagtcctcatgttttaggt
gaagttttggtggcgagcgagagcggagctgcaaacctgtggactgtggggaaagggatg
cagaaggtccgattcgaggacagcaacctgtacttcaacgctaagtctccatggagatgg
tgcgagttcacggcccacccgagggtggtgctgtacgcggacaggacgggggtggaccta
acagacatcagggtgagtccggcctcctgccacactctgtttcgtatcagcagcaccgct
gagtgtcggagcggagagagactcgtcctgtccaggtatctaggagactcccactccttc
caccacctcatcaccactcagtactcagcctacatcatggacgagcgcttcccgtgcgtc
ccaatgctcaagtgggatcacatgatgacatctccacctattttttgtcacattgttcct
ggctgcgcctcctcagggttgtcagctgacgaagcaaccactaaggtcctgctcagctcc
cacagttctcaggaaatgatgatgctgcagtatgcaggaggcagaggggacgcctgtttc
agtcgaggtcctcctcaggctctgctcaggcccagagacagtctgaaacatctcccagtc
cagatccctcaccgcttggacgtcgcaaccaacagactgtcctcatatgtcgcaggtctc
acttgcatccagaaggcagcagaaggtggaggtggtggtgaggagtgcatgtgcgtcctc
cagctgacggaggcaggagatatattctatcagatcctggagcacgagcagccggacgca
gacgagtcacaacctcaagcagaggagggtggcctcaagcctcggcaacaaattcgtccg
gggccgacaacaagggcaaggaaaaccgctgagagccttccacctgattctcagatgatc
atctctgagacatcgagtgacgaggacgtcgttgggcccacacagtgtccatcgaggatt
gtacccgaaacaccagaaagaggacggcaagcatccagctcctctgaagattcagagtca
gagatgaaccgaaaccgaaggcggttgcagctgcaggttgttgtcaacgatgattcaggg
gcggaggaagaaattggatttgacgtcgatgtgaatgataaagctgttgaagtggaggaa
actgtcagtggtgcatctcagagaaagactccagcaaagctgagtagtggtgctcttgtc
acatggaaacattggctccagaaactgatgcacaaaacctatgaaaataagccccgctca
cacctcttgcagcatttcagagccaacactcaaggtctgctttgtattcctgaaggcgat
caaggcacttcacggcaggatcacggtgtgcaaagcctgaggaaggagctgaggttgggc
atgtccagacggtcgctcctggttcacagcatggtctccacctctctgaggcctccacat
gtagtacccttaccaaaccagtttaacacgaatgtctggacagatccactcagtcaccga
ctgaccctctcctggcagggtgaggatgcatggcggaagtggtggaaggaccagctgggc
ttcaccaaggaggcgaaggtgcaggctctgaggaggaagaggaggaaagaaaaggcggca
aagcaagccactggacgtcgattgaatctgagcgctagctttacctcatctgtcagctac
caatcagcgctcgatgacctctctgactcagcagggtggtcctctggagtcagccagggg
gcatggtcagacacggaggacagagggaggctgtcccagttcttaagtatgttggacgat
gagacttcgagggctgcgacgccttccaccgttctaaatgacactccaacagcaactcca
actcccaccccgaccgccacaccccaacgtgataaacttggtgaccccagcaggaccacc
acccttcctcagacccagacactgggactggactccacaccagccagtcagaggaggagc
aaacgaccagcagacgactacctcaaatctctgttcgcgccacaggatgatccttcgcag
agccattacttggatgaggggagctccacaaatccattcttggcctcttctcagctcccc
agctcccagtccatccctctccgaaattacagtgtgaatttgaccagaatgaactttggc
tcgccgggctcctctcagtccaagtctcagacctactctcagtcccagagttcacagggt
cggctgtcacaggcatcgcaaccaaagaagaagtctcgaatgggattttga
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