Oreochromis aureus (blue tilapia): 116311406
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Entry
116311406 CDS
T07295
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oau01001
]
116311406 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oau04054
]
116311406 (ciita)
Enzymes [BR:
oau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116311406 (ciita)
Protein kinases [BR:
oau01001
]
Serine/threonine kinases: Other
TAF1 family
116311406 (ciita)
Pattern recognition receptors [BR:
oau04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116311406 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
AAA_16
LRR_8
nSTAND3
LRR_At5g56370
nSTAND_NTPase5
AAA_22
NB-ARC
NLRC4_HD2
AAA
TsaE
Motif
Other DBs
NCBI-GeneID:
116311406
NCBI-ProteinID:
XP_031584372
UniProt:
A0AAZ1X496
LinkDB
All DBs
Position
LG4:24596411..24617104
Genome browser
AA seq
1659 aa
AA seq
DB search
MAHFEEVLDEVRSALTWASPAEIRALLEGLVEEQIISEAYSKSLGLHRFTDGLTPELLCG
ESGWILGSDEPDGVFASRASSTHQHLSHGPLIKVRKGGSQSPSVDYHLTGSEFVPSVDDH
YSTRLEPETCSLYEDQVISRDKLIQELREGTAMDEHYPTQSLYSVPTVFDGRLALNDDIT
ELLTSAPSMQKPVSDSERVNQGNLEIEREWLEQIEEAARRIAVPLWQHWDKGRRMLQPLV
YYNTTGCSTSDNTVTYSEAQCAILDLEEEMELAAACRTLDACTGNFNTSFTLDDEEAADT
PEEFYYPLYDEVPTPGICMDPFKTFGLEGNASPVEACEATDSNNNVTDNMGGLLDAWWPG
ETTDDLCCLTEDTQCGAGSALAQFTFQHLSPSFAPQDASVTAEDDMMAGVTENVYGTETW
DIDGVTGMKDTMESHCNVKMLEVDPNPITVALDLDLLLDDLADEINEKLLDVDSLFEYLE
LNDSLPHPSWPFDDLPTAAEVPITNSIEQIQKPKAKGQSRRRKRPRDSQPQLCSDESPKA
KSPKPSGQPKTKESPAKPAVESGSDPASGPSPAETLPIPVTTTPPRFFRVYPSQTGSAIP
IQIITISDSAGNPVQLSPPPPLIRFPIPGSATTPTYILVPTVSPPSKCQLPPLSPVDGTV
APVHMSSSPLGSLSETASKAMSPPCTSPVSPGNEMSPCKESPLPQSPKVLDIPQTVKDYI
QEAKAHMSQTYQDMETGLSLSSHYVDVQVSQREVIRSGKNTNKCLDKELVIKGDTDRQKT
MLALNQIFDGSNGEKPRRYILLLGNAGMGKTTLIKKLCIDWSRDCIPQFDFVFLLDGKKL
SVTEPVYSLQTLLLNLSSSAPSCVDPEAVYAQVLAAPKRVLIIFDGFDELRNYETLLQAQ
EKDLTASLQKDSKAKTFTVRQLYSAILQRVLLPGCTLLLSTRPRGTASQLLRRTDSLLEM
CGFTPANVETYLSQYFSDPSVRESALESLKSMSYLNLLCWNPGLCRLVCLILEQSQSVDV
LPRTLTGLCHQVLCLKMVKDGRSTPTHTEAQAQSVEDTETQTSNTSQVKKCSKNNQAKSR
TQTRTSSRPQRAKKAHEQEAQVDKVDQDLKSSGGEAVTEDRELLSQLSTLAWEGVKANSS
ILPTGRDISAKVKAFGLRTGLFLSHHLRASPCLSSGAKEEGENETEAGETEQKTEHSERT
ANDITDHQNDQILLWANPFLQSYIAAVHLVLSRTVTDRSFLQTLPFQSGGKGRRRPQREE
LELTQRFAVGLLFHNRTELQRFHTHTETAFRDMVANKQGLVTKHLEGLSYADLSPSQILE
ACHYVYEASFTYNDGGRDAGRTRLVTHLAANLPEFLTFHGVQLSPPDVFTVQKALEQGGT
EGRRFCLDLEDSGIQICGLRALVGLNNINTYRSCIADTITLWQLLEQSDEESLLQRAVSK
FTIHPLKAKQVCHIEHLEKLVNIHIHKRLSDSSSESHSILSEGVPAVKELHKLEFELGPD
NGPLVLPKLWDLLPGLHNLQHLDLENSKIGDKGAEKLASALVSLPSLEILNLSQNCIGDE
GVKKLADTLKDLPNLHCLSLYSNMISDEGAESLAAVLPHMASLTDLDVKFNKLTDVGAQS
LGASLRNCTKIKTLRMWNQCIPFGVLERLIQQDSRILLH
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggctcattttgaggaggtcctggacgaagtccgctcggctcttacctgggcctcacct
gctgagatccgagctctgctggagggtctggtggaggagcagataatctcagaagcgtac
agcaagagcttgggtctgcatcgattcactgatgggctcacaccggagctgctttgtggg
gaatcagggtggatactgggatctgatgagcccgatggggtatttgcttctcgagcatct
agcacccaccagcacctcagccatggaccgctcattaaggtaaggaaaggtgggtcacag
tctccctccgttgactaccacctgacaggatcagagtttgtcccatcagtggatgatcat
tacagcacaagactggagccagagacttgctcactatatgaggatcaagttatttccaga
gataaactcattcaggaattgagggaagggacagcaatggacgaacactacccaacacaa
agcctctactctgtacccacagtgtttgatggcagacttgcattaaatgatgatataact
gaactgctgacaagtgcaccttcaatgcagaagccggtaagtgatagtgaaagggtaaat
caggggaatttggagattgagagggagtggttagaacagattgaagaggctgctaggcgc
atagctgtacctctgtggcagcactgggacaaaggaaggaggatgttacagcctttagtt
tattataacacaactggatgttcaactagtgataacacagtgacatacagtgaagcacaa
tgtgctattttagatctggaagaggaaatggagcttgcagccgcttgcaggacactcgat
gcgtgcaccggcaactttaacacaagcttcacgctggatgatgaggaagctgctgacaca
cctgaggagttctattaccctttatatgatgaggtgccgacacctggaatctgcatggat
cccttcaaaactttcggattagaaggaaatgcatcacctgtggaagcctgtgaagccaca
gactcaaacaacaacgtcacagacaatatggggggcctcctggatgcgtggtggccaggc
gaaactacagacgacctgtgttgtctgactgaggacacacagtgtggcgcaggttcggcg
cttgcacaatttacttttcaacatttgagtccctcatttgcaccacaagatgcttcagtt
acagcggaagatgacatgatggcaggggtcacagaaaatgtttatggaacagaaacctgg
gacatagatggagtaacaggcatgaaggacactatggagtcacactgcaatgtcaagatg
ctggaagtggatcccaatcccatcacagttgctttggacttagatctgttgctagatgat
ttggctgatgagataaatgaaaaattgctggatgttgattccctctttgaatacttggaa
ctcaacgacagccttcctcatccctcatggccctttgatgacctccccacggcagctgag
gtacctatcaccaacagcattgagcagatacagaaacccaaagcaaaaggccaatcacga
aggagaaaaagaccgagagattctcagccacagctgtgctccgatgaaagccccaaagca
aaaagcccaaaaccatcaggtcaaccaaaaaccaaagagtcaccggctaagccagctgtt
gagtcaggcagtgatcccgcatcagggccgagtccagcagagactttaccgataccggtc
accaccactccaccaagattttttcgtgtctacccttcccaaacaggctctgcgattccc
attcagattatcactatctcagattccgccggaaatccagtccagctttctcctcctcct
ccactcattaggtttccaatccccggcagcgccactacacctacatatatattagttcct
actgtgtcaccaccctctaaatgccaattgccaccactctccccagtcgatggcacagtc
gctccggtccatatgagttcgtccccactgggttctctgtcagaaacagctagcaaagcc
atgtctcccccttgtacctcacctgtatccccaggcaatgaaatgtccccatgtaaggaa
tcacctcttcctcagtctcccaaggtccttgatattccacagactgtcaaggactacatt
caagaagctaaagctcacatgagtcaaacctaccaggatatggagacgggcctcagcctg
tcttctcattatgtagatgttcaagtgagccaaagagaggtaattcgctctgggaaaaat
acaaacaaatgcctggacaaggaactagtcatcaagggagacacagatcggcaaaagacc
atgctggcactgaatcagatctttgatggttcaaatggagaaaaacccagacgatacatt
ttgctgcttggcaatgccggcatgggaaaaacaactctgatcaagaagctgtgtattgat
tggtccagagactgcatccctcagtttgactttgtattcctattagatggcaaaaaactg
agtgtgacagagccggtctacagccttcagacactcctgctcaacctctcctcctctgcc
ccatcctgtgtggacccagaagcagtgtatgctcaagtcctcgcagcccctaagcgtgtg
ctcatcatttttgatggttttgacgaattgcggaactatgaaactctacttcaagctcag
gaaaaagacctaacagcttcactgcaaaaagacagcaaggcaaagacttttacagtaagg
cagttgtattctgccattcttcaaagggtcctgcttccaggctgcactcttctactctcc
accaggccacggggaactgccagccagctgctcaggcgtacagacagccttctggagatg
tgcgggtttaccccggcaaatgtggaaacatatttgtcccagtacttctctgatcctagc
gtcagagaatcagctttggagagcctaaaaagcatgagctacctaaatcttctttgctgg
aaccccggactatgccggctggtgtgcttgattttagagcagtctcaaagtgtggatgtc
ctaccaagaactttaactgggctctgtcatcaggtgctgtgtttaaaaatggttaaagac
ggcaggagtactcccacacacactgaagctcaggctcaatccgtagaagacactgagaca
caaacttcaaatacctctcaggtgaagaagtgttcgaaaaataatcaggcaaagtccaga
acacagacacgcacttcctctcgcccccaaagagcaaagaaggcacacgaacaggaggca
caagtagacaaggtggatcaggatctcaagagcagtggcggagaagccgtaacggaggac
agggagttgttgtcccagctgagcactttggcctgggaaggggtcaaagccaactcttcc
atccttcccacaggacgggacatatctgccaaagtcaaggcgtttggcctgagaacaggc
ctctttctctctcaccacctgagagcgagtccatgcctctcaagtggtgccaaggaggaa
ggagaaaatgagacagaagctggagagacagaacagaagactgaacacagtgaaaggact
gccaatgatataactgatcaccaaaatgaccagatcctcttgtgggccaaccctttcctt
cagagttacattgcagcagttcatctggttttgtcaaggactgtaacagaccggtccttt
ctccagaccctccctttccagtctggagggaaaggtcgtcggcgacctcaaagggaggaa
cttgagctcactcagcgatttgcagttggcctcttgttccacaataggacagaactgcag
cgattccacacacatacagagacagcctttagagatatggtggctaacaagcaggggttg
gtaacaaaacacctggaagggctttcctacgctgaccttagtccctcccaaatcttggag
gcatgccactacgtctacgaggcgagttttacgtacaatgatggtggccgagacgctggc
aggacacggctggtgacacacctggcagcaaatcttccagagttcctgacgtttcatgga
gttcaactaagcccaccagatgtgttcactgttcagaaagcgcttgaacaggggggaact
gaaggcagacgtttctgtttggacctggaggactctggcatccagatctgtggacttaga
gctctggttggcctcaacaacatcaacacatacaggtcatgcattgctgacaccatcacc
ctctggcagctgctggagcagagtgacgaagaaagtctcctccagagggcagtgtccaag
ttcacaatccatcctctgaaagctaaacaggtgtgtcatatagagcacctggaaaagctg
gtgaacatacacattcacaagaggctatcagacagctccagcgagtctcactccatcctg
tctgagggagtgccggcagttaaagagctacacaagctggagtttgaacttggtccagat
aatggtcctctggttcttccgaagctgtgggatctcctgccagggctgcataacctacag
cacttggacctagagaacagcaagatcggggacaaaggagcagagaagctggccagtgcg
ttagtctcactcccttctttggagatacttaatctatcacagaactgcataggagacgag
ggtgtgaagaaattagcagacacactgaaggacctgcctaatctgcactgtttaagtctc
tacagcaacatgatttctgatgaaggggcagagagtttagcagctgttctcccacacatg
gcttccctcactgaccttgatgtaaagtttaacaaactaacagatgtcggcgcacaaagc
ttaggagccagcctaagaaactgtacaaaaattaagactttaaggatgtggaaccagtgc
atccctttcggtgtgcttgagagactcattcagcaggacagccgcatcctattgcactaa
DBGET
integrated database retrieval system
