Oreochromis aureus (blue tilapia): 116311413
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Entry
116311413 CDS
T07295
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X2
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116311413
Enzymes [BR:
oau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116311413
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
U-box type E3
116311413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-CCHC
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
116311413
NCBI-ProteinID:
XP_031584381
Ensembl:
ENSOABG00000008441
LinkDB
All DBs
Position
LG4:24875747..24897794
Genome browser
AA seq
1789 aa
AA seq
DB search
MPHIHYKFSSRLNYDTVVFDGVHITLNELKRQIMGREKLRAGDCDLQITNAQTKEEYTDC
GSLIPKGSSVIVRRIPSSSSKTHNNERSEVQLHHAFGASRAMDDHSSTRALSFFSKMQMA
NLVEVDASEEDKIKVMINQSIYDPMNVNTKPSNVLSANYTCYRCGNPGHHIRNCPSSGQD
KNSEAPLRIKKSTGIPRSFMVEVDDPNIKGAKLTNCGRYAVPAIDAEAYAIGKKEKPPFL
AQEPESEDQDDPIPSELLCLICNELLADAVVIPCCGNSYCDECIRTALLESEYHICPTCD
QSEVSPDTLIANKFLRQAVNNFKKEQGQDKSLKRKPATSQSQNLTPAPTPVPTPPPVPTP
PPLPMQSQPQKPQQSSHSQQDSLLDHLKTANTPPQSQVSEVQPTTTDPASENDTAGTFLQ
PLENQLEISENEIEGKMCSDSAGAALSGKVSNKDPTDPPSRPITPDNDAPVAEQPLTGSV
SQENQHSCSGPTPVYPESSVSLESSSSSLVCLAGGKTESNTQQLSTIPSTSSSSSYSNTP
PPLFPSPLFHTYLSAQQSHSTYPPGYPPATPIWTLPAPQGTPIPSLCSSTTTTSSIPHLI
PQEWYKYQRKKKERSPQRASGYRRSSSHSKSSTTKASCSYSQSSSRSESRSRSRSRSRHR
SPYSHQRDLHTRSRQPSSYTYCYKRSRSPTPSSSSSPRRARHSRSKSPSGRKDRHHSRHR
SKKSSSSSNHSRKRGERSGKEAARSEDSISRNMCTSQANSLELDRECYLQWKNEYKEWYE
KYFSSYHQLHQLPVPLLSLPPPPPPPQWVSTDRSRNQSQASLNSRYQPQDRCPAEMDGCS
PSSESSSDSRSPPSHSSSESRSTPSQSCSDSSSSVSFKANDSRSPPSQSSSDSRFTPSED
RAQPRASTERCNEKSRHKQVTLSKSSMGMKLQGPSTDNKPLKKLEESSPLKHEQKKKKKQ
PEDNGQETSPAHAESSRDDSRKDKRKHSSEPKACKHSTPVQKDSDQTVLKQDQPERKFME
SNSEGEECWKRGRDLDFSDGKRQHKAKPNKELDRTSKEREENPGGSKTPDSRLEENRKRK
NEDLVKNERDGSLSGEMQSGKHLKTKTAEEPENRLSEFLKPLDKEKQKTEKKSEKKTWPL
TAKDIWEEGMKVKPQMKISININLDGKRKEENNGKHEVTGKAQENINYPENREEVQRVNR
GELNEKESSRNQEDRSEDKLIQGEGETRLTWDKFTFRDDKGAIAGEEENTRERKDDEDEG
ELDLWHCALTGVEESETEKGEEESLRDDDKDQEMGDSQKEQENTEAWKEELMEGIEMMTR
EEGTLRFSSSRSKNEGHQDGPNTKLGDGSREEESRQRRTVVKTLEKYTQERWKELVHIQA
PRSTWERDDEQDEGKARVHTDRVSLTLPQPSVTNKVEGDEEQRGERRREKERDSPCSWSH
RSVAPSSGKDRAVSTTSANAGKETRREMDRQRNRERERQQERKRSKEQTREEGSGRDGDK
ERKRTAYLPTSSQFYSFSTSHDADRTDLQYGGSQGSNKSSSCPSGKFTSARNRESSTISR
EPVLPDEDAQKTHREPSLNLRYKDKDYSHYHSNHQDSSGSDRNKDRAPGTHHSHSRGKGR
DLLPFESPGYSQRESPHLGLMQSKAGKEEWKPNKAEKLVKEGKEGRENRGMMAVQGGGAW
WEHEADYKVDGEEGWFGGGRDLEEGEMLSSRSSSVGSSASQGNSKDDKRTEKERKQKRQK
KEKRQATLEQPQDRELKKHTHKKSKNSREGAEEESGGEGADRWKRKENH
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacattcattataaattctcctccagactcaactacgacacggtggtttttgat
ggcgtgcacatcacgctgaatgagctgaagaggcagatcatgggcagggagaagctccga
gccggggactgcgacctgcagatcacaaacgcgcagaccaaagaagagtacactgactgt
ggcagtctgatccccaaaggttcatctgtcatcgtcagaaggatccccagctcgagcagc
aagacccacaacaatgagcgatcagaagtccagcttcaccacgcctttggagccagcaga
gcaatggatgatcacagttctacaagagccttgtcctttttctccaagatgcagatggct
aacctggttgaggtggatgcatcagaggaggataagatcaaagttatgataaatcagtcc
atctatgaccccatgaatgtaaacacaaaacccagcaatgtcctttctgcgaattacacc
tgttatcgctgtggaaatccaggacaccacatcaggaactgtccttccagcgggcaggat
aaaaactctgaggcacccctgaggataaagaagagcacgggcatcccacgttccttcatg
gtcgaagtggatgatcccaacataaaaggcgccaagctgaccaactgtggtcgctatgca
gttcctgccatagatgcagaggcatatgctattggcaagaaggagaaacctcccttcctt
gcacaggagcccgagtctgaagaccaggatgatcccatacctagtgagctcctctgtctg
atctgtaatgaactgctggctgatgccgtggtcataccctgctgtggaaacagctactgt
gatgaatgtattcgcactgccttgttggaatcagagtaccatatctgtcccacctgtgac
cagtcagaagtctctcctgacaccttgatagccaataaatttctcagacaggctgtcaac
aattttaagaaagaacaaggacaagacaaaagcctgaaaagaaaaccagccacctcccag
tctcaaaacctaactccagcaccaacgcctgtccctaccccgccccctgtccctaccccg
ccccctctgcccatgcagagccagccacagaaacctcagcagtcatcccacagccagcag
gactctcttctggatcatctaaagactgcaaatacaccaccacagtctcaagtctctgag
gttcaacccacaacaacagacccagcctctgagaatgacacagcaggcacattcctccag
cctctagaaaaccagctagaaatatctgagaatgagattgaaggaaagatgtgcagtgac
tcagcaggtgctgccctgtctggaaaggtttcaaacaaagatccgactgatccaccgtca
cggcccataacaccggataatgacgctccagtagcagagcagcctctgacaggtagcgtc
agtcaagagaatcaacactcctgctcaggtccaaccccagtataccctgaatcctcagtc
agcttggagagctcttcttcatctttggtttgtctcgctggaggaaagactgaatctaat
acccagcagctttctaccatcccctccacatcatcctcctcttcatattcaaatactcca
ccacctctttttccctccccactttttcacacgtacttatcagctcagcagtcgcacagc
acttaccctcctggatacccacctgccacacccatctggacccttccagccccccagggt
acccctatcccttccctttgctcctctactaccaccacctcctccatccctcatctcatt
ccccaggagtggtacaagtatcagagaaagaaaaaagagaggtcacctcaaagagcatct
ggctacagacgctcctcttcacattcaaagtcttccacaaccaaggcctcttgctcctac
tctcagtcttcaagtcgctctgagtctcgctctcgctccagaagcagatcaagacaccgc
tctccctactctcatcagagagacctgcacacacgctctcgccagcctagctcttatacc
tactgttataaacgctcgcgctcacctacaccatcctcgtcgtcttcacctcgaagggct
cgtcattccaggtccaagtctccatcaggcagaaaggaccgccatcacagtcgccatcgt
agcaagaagtcatcttcaagcagcaaccactccaggaagcggggagagcgctcagggaag
gaagcggcacgctcagaggacagtatttccagaaacatgtgcacaagtcaagcaaacagc
ctggagctggacagggagtgctacctgcagtggaagaatgagtacaaagagtggtatgag
aaatatttcagcagctatcatcagctccaccagctgcctgttcccctactcagtcttcct
cctcctcctcctccccctcagtgggtgagcacagacagaagcagaaatcaatcgcaagcc
agcttgaactctcgctaccaaccacaagatagatgccctgctgagatggatggctgctcc
ccctcgtcggagtcatccagtgacagtcgctctcccccatctcattcttcaagcgagagt
cgctccacgccgtctcagtcatgcagtgacagcagttcctctgtgtcttttaaggctaat
gacagccgatcacctccatctcagtcgtccagtgacagtcgcttcacgccatctgaagac
agagctcagccgagagcatctactgagaggtgcaatgagaagtcaagacataaacaagtc
acgctttcaaagagtagcatgggaatgaaactgcaaggaccgagtacagacaataagcca
ctgaaaaaactggaggagtcaagcccactgaaacatgaacaaaagaagaagaagaaacaa
cctgaagacaatggacaggagacttcgcccgctcatgctgaaagctctagagatgacagc
agaaaggacaagaggaagcacagcagtgaaccaaaggcctgcaagcatagtactccagta
cagaaagattcagaccaaactgtcctgaaacaagaccaacctgaaagaaaattcatggaa
agcaattcagaaggagaggaatgctggaaaagaggcagagatttagactttagtgatggg
aagagacagcacaaagcaaaacccaacaaagagctagacaggacgagcaaagagcgagaa
gaaaaccctggaggcagcaaaactcctgactctagattagaggagaataggaaaagaaag
aatgaggatctggtgaagaatgaaagggatggtagtctttctggtgagatgcaaagtggc
aaacacctgaaaacaaaaacagcagaggagcctgaaaaccgtcttagtgaattcctgaaa
ccacttgacaaagagaagcaaaaaacagagaagaagtcagagaagaaaacatggcctctg
acagcgaaagacatctgggaggaagggatgaaggtgaaaccgcagatgaagataagcatc
aacatcaacctggatggcaaaaggaaagaggagaacaatggaaaacacgaggttacaggg
aaggcgcaggaaaacatcaattaccctgaaaatagagaggaggttcagagggtcaacaga
ggtgaactaaatgaaaaggaatccagtagaaaccaggaagaccgttctgaagacaaactg
atacaaggtgaaggagaaacaagactgacatgggacaaatttaccttcagagatgataag
ggagcgattgcaggagaggaggaaaacaccagagaaagaaaagacgatgaagacgagggg
gaattagacttatggcactgtgcgctcacgggagtggaggagagtgagacagaaaagggg
gaagaagagagtttgagagatgacgacaaagatcaagagatgggagactcacagaaggag
caagaaaatacagaagcgtggaaggaggagctgatggaaggcatcgagatgatgacgagg
gaggaaggtacactgaggttcagctcatcaaggagcaaaaatgaaggccaccaagatgga
cctaacaccaagctgggtgatggcagccgtgaagaagagagtcgtcagaggaggacagtg
gtgaaaacgttggagaaatacacccaagaaagatggaaggagctggtacacattcaggca
ccccgatcaacatgggagagagacgatgagcaggatgaaggaaaagccagagttcacact
gaccgtgtttctttgactctgcctcaaccgtcagtgaccaacaaagtagagggtgacgag
gaacagcggggagagaggcgcagggagaaagagagagattctccttgctcctggtcacac
agaagtgtggctccctctagtggcaaagacagagctgtaagcaccacatctgcaaatgca
ggcaaggagacgaggagagagatggacaggcagaggaacagagagagggagaggcaacaa
gagaggaaaaggtcaaaagaacaaacaagagaggaaggaagtgggagagacggggacaaa
gagcgaaaacgcactgcctatctccccacctcctctcagttttactccttctcaacatca
cacgatgcagataggacagatctgcaatacgggggcagccagggtagcaacaagagttca
tcctgtcccagcgggaaattcaccagtgccagaaacagggaaagcagcacgataagcaga
gaacccgtcctgcctgatgaagatgcacagaaaacacacagagagccatcactgaatctc
agatacaaagataaagactacagccactaccacagtaaccaccaagattcatcagggagt
gatcgaaataaagacagagctccagggacacaccactcccacagccggggtaaaggcaga
gacctgctcccctttgaatctcctggatactctcaaagagaatcccctcatttggggtta
atgcagagcaaagctggaaaagaagagtggaaaccaaacaaggctgagaaattagtcaaa
gaaggcaaagaggggagagaaaatcgaggcatgatggctgtgcagggtggaggtgcctgg
tgggagcatgaggctgattataaagtggatggagaagaaggctggttcgggggagggagg
gatctggaggaaggggagatgctcagcagccgaagcagcagcgtcggctcgtcagcgagc
caggggaacagcaaagacgacaagaggacagagaaggagaggaaacaaaaaaggcagaaa
aaagagaaaaggcaggcgaccctggagcagccgcaggacagagagctgaagaaacacaca
cacaagaagtccaagaacagcagagagggcgcagaagaggagagcggaggagagggggcc
gacaggtggaaacgaaaggaaaaccactga
DBGET
integrated database retrieval system
