Oreochromis aureus (blue tilapia): 116311575
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Entry
116311575 CDS
T07295
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116311575
03036 Chromosome and associated proteins [BR:
oau03036
]
116311575
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116311575
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116311575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
116311575
NCBI-ProteinID:
XP_031584585
LinkDB
All DBs
Position
LG4:27275213..27292922
Genome browser
AA seq
2039 aa
AA seq
DB search
MEDKKKKKEDKKKRETSQKVPEQKIKVPESAKPTCSQPPVTPGSVSPSPGPVAPSSPSPG
AAGGSAQVPPGGGNNAKQRTAVANGQPSTSPSGSQTTQQQRYMSREVPPRFRCQQDHKVL
LKRGQPPLSSMLLGGGGGGGGGGGEGGSGGAGGGSGWGAAPPLPSQGADNPNANTAGGTD
SNLGSSSPSPPNSSSSSLCVAAPSSSTTTTSTYANSTWGAGSGSQSSSQGCGKVFVDGTD
LEDWPTIIGGAKVSSDGAGGGVQDCPGNNNSSASWSEISIQQKGGAGNMDNPSPPRSSPL
SSTSSLNECVQSSGGGGGGGSGVWVSPTSSQVDAGLGLAAFYNSKVSHLLPSPQESSSSS
SVPGANFNPDMNPSAWPALVQSGTSTSAGDSAPLHSSVTSSSSCSANTTLITTHTFSSVN
QTDLYQQHTETAAGARSGEQQEQHLGNPGQELGSGGAAREAGPNLEGGSEGDCGAASEGE
GSSNLSGSTSSSSASSSWRSIPPVSTDLSAGASQADGWGGGGSGAQGQEGNVWGSSTPGN
KTGWGRGNGGGSTTPVVSQGPWEGSSSDAEWGETAGSASSSNLAIASGRGEEGSSISSSA
GSLGVVGSSLEDSSSPKFATMTKAWDNQKGMDTGDGAVMEWGGGTGGEGPSSSGGGSIAG
SGGGGSGSEQKQESSSSARQHSHQTSNAEVALLSLLNRPDLDPKVLSNTGWGQTQIRQNV
AWDLDTTSGVGNRNERNTSSSSAFSSATMNTTTSRSPRYPSNTGSVTNDTSGGSHATSLN
STARDGWDGGTTKSTCGPHMPSSTIRKLGSPEEDLEGSQGKAAGGWGDRPPESQGKAWGA
EEQQWGDQRGGNWRDIGEQGSGWTDGPEDKGTGGWKGGGRGETSGWGGGGDWRQRDSTPG
GGWGDGRSRGGSNSDEGSSWGASDEGGSQRGGWGDVGGVKAHPDWGSTKPHTAAAQIPNS
QATPMKAPNQQQHQSQGQQPPGGSIQGGWNSRPNVGGGPPPSKNQNQSSGWTSGPIPQIS
GGGSGDTLEPSGWEEPSPQSISRKMEIDDGTSAWGDPNRYNTKNVNLWDKNSAIPGQSHS
QQAPPPSMQQQPPRRQQGMQSSSTTPGNGAVGAGMWGGGVQTVDNGTAAWGQASDATSGW
GDPDEPGKASGWGNPSPNPGKPGAKSIESWIGKGDSISASRHPSWDEEEDGGGGAWNSTG
SQGSSSSFNSGGWGQTHGGKRGNMKAGGGDSWMNPVSRQFSNMGILDDPGVDKKMEGDKR
GITDYNGEMRRGGRGGGGYRMPSSKDMGPVDMGPYGEKMGGHGVFVSGGGGMSQPRGMHQ
PGMHSMNPSQGLRAQVPHQFLSAQVPGPMLKQMPSPGGSVGGVVGGVGGVGGVGSVGGVG
GGVFPPQISPQQLAMLSNIYPPMQQFHLACQFLLQQQQQQQQQQQQQQFLQNQRKFPQPQ
PLRQQPDPQQLARIMAILQQQRQHQQGGVGGAAPGGSSKLSPSHLGGGLSKQAMVDPVPH
PGIGGTLSDLHTKTPGMYSGLTPGSNLSGLELGPMMGGMKDLGGQQSRFKWMMEGHSPAP
SPPDSTIHKNGPLPSAVKVRGGSPYSQYEMLGSDGLGIPPQGSTDSWHRTPGSKMGNKSA
TSSWPPEFQPGVPWKGIQNSGDPESDPYMTPGSVLGSPGSPSLNDSDHQLLRDNIGPNPS
LNTSLPSPGAWPYSASESPLSNAHSTGKYSDYKPSWPPEPIGQNKLWKTSRNSSQLPRPP
PGLTNQKQASPSPWGTGGPRLARSWGGGGINQESRFGQGSAWSDGAASRGSCWLLLSNLT
PQIDGSTLRTICMQHGPLLTFHLGLTQGTALIRYSTRQEAAKAQGALHMCVLGNTTILAE
FVSEEEVARYVAHSQAGGAEGASSGGAAAGGAQGSSGTGTTVVASSGGSSPGSERAAVGA
TSGGNGNGSGGESGAAVLAGVRSSGSGWQSLDGTGSSSETSSAQGPGLGIFSQWSTNGAG
EGGGVGGVESGRSGLWGGMTAGYPSSSLWGAPQMEERHQMDSPAGLLPGDLLGGGTDSI
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaagaagaaagaagataaaaagaaaagggaaacctctcagaaggtg
ccagaacaaaaaatcaaagtgccagaatcagccaagcccacctgttcccagccacctgtc
accccaggctcagtgtcccccagccctggccctgttgccccctcatcccccagtcctggt
gcagctgggggttctgcccaagttcctcctggtggtgggaacaatgcaaagcagcggact
gctgtggccaacggacagccctccacctcaccctctggaagtcagaccacccagcagcag
cgatacatgtctcgcgaggttccaccaagatttcgctgccagcaggaccacaaagtgcta
ctgaagaggggccagccaccgctgtcctccatgctgctgggtgggggtggaggtggaggt
ggaggtggaggtgaggggggctctggaggggctggaggaggcagcggctggggggccgcc
ccacctcttccctcacagggagcagataaccccaatgcaaacacagctggaggcacagat
tccaacctgggttcatcttccccttcaccaccaaactcctcctcatcctcattatgtgtc
gctgctccgtcgtcttctactactactacttcaacttatgcaaattccacatggggggca
ggctctggcagccagtcctcttctcagggctgcgggaaggtgtttgtggatgggactgac
ctggaggactggcctaccattatagggggggccaaagtgagttccgatggggctggagga
ggggtgcaggactgccccggaaacaacaacagtagtgcctcatggagtgagataagcatc
cagcagaagggaggagcagggaacatggacaatccttccccccctcgttcttctcctcta
tcctccacttcctcactaaacgaatgtgttcagtcaagtggtggtggtggtggtggcggc
agtggtgtatgggtctctcccacctcatctcaggtggatgcggggctaggattagcagca
ttttacaattccaaagtctcccatcttcttcctagccctcaggagagcagcagcagcagc
agtgtccctggtgccaatttcaaccctgacatgaacccctccgcttggcccgccctggtg
cagagtgggacatcaacttcggctggggacagtgctccactacactcatccgttacttca
tcttcctcatgttccgccaacaccaccctcatcaccactcacactttttcatctgtgaat
caaactgatctttatcagcagcacactgaaacagctgcaggagccaggagtggagaacag
caggagcagcacttaggaaacccaggacaggagctgggttcaggcggggcggcacgagaa
gcaggaccaaatctagaaggtggcagtgagggggattgtggggctgctagtgaaggagaa
gggagcagtaatctttctggctctacgtcttcctcctctgccagctcttcttggagatcc
atacccccagtgtccactgacctcagtgcaggggcctcacaggcagatgggtggggtgga
ggagggagtggagctcaggggcaggaagggaatgtttggggctctagtaccccaggtaac
aagacagggtggggcagaggaaatggtggtggttcaactaccccagtggtatctcaggga
ccgtgggaaggaagcagttcagatgcagagtggggtgaaactgcaggaagtgcaagttca
agtaatttagcaatagccagtggaagaggagaagaggggagcagcatcagcagtagtgca
ggcagccttggtgttgttggcagcagtttggaggattcttcctcaccaaagtttgcaact
atgacaaaagcatgggacaatcagaaagggatggatactggggacggggcagttatggaa
tggggtggaggcaccggaggtgaaggaccatcctctagtggaggaggatccatagctgga
agtggtggaggagggagtggtagcgaacagaaacaagagagttcctcatctgcgcgccaa
cactcccatcagacctccaatgctgaagtggccttacttagcttgctcaatcggcctgac
ctggaccccaaggttctgtcaaacacgggctgggggcagacccagattcgacagaatgtg
gcctgggacctggacaccacgtcaggagtcggaaacagaaatgaaagaaacacttcatct
tcctctgcgttttcatcagcaaccatgaacactaccactagtcgcagtcctaggtaccca
tctaacactggttcagtaactaatgatacatctggtggcagccacgcaactagcctgaac
tctacagcaagggatggctgggatggtggcactacaaagtccacctgtggtcctcatatg
ccaagtagcactatacggaagctgggatcaccagaagaagatctagagggcagccagggg
aaggcagctggaggctggggtgatcgcccacctgaaagccagggcaaagcatggggggct
gaagaacaacaatggggggatcaaagaggaggtaactggagagacataggagaacagggt
agtgggtggacagatggtccagaagataaaggaacaggggggtggaaaggaggtggaaga
ggggagacaagtggttgggggggaggaggagactggagacagagagattctacacctgga
ggtgggtggggagatgggcgaagtagaggtgggagcaactctgatgagggatcttcctgg
ggtgcatcggacgaaggagggtctcagcgaggaggatggggagatgtgggtggcgtcaaa
gcccacccggactgggggagtacaaagccccacacagcagcagcacagataccaaacagc
caagcgacaccaatgaaagccccaaatcagcagcagcaccaatcacagggtcagcaacca
ccaggaggttccatacaaggagggtggaacagccggccaaatgttggaggtggacctcca
ccttccaagaatcagaaccaaagttcaggctggacctctggcccgattccccaaatctcc
ggaggtggcagtggtgacaccctggaacccagcggctgggaagagccctcccctcagtcc
atcagccgcaaaatggaaattgacgatggcacgtcagcctggggagacccgaaccgctac
aacaccaagaacgtgaacttgtgggacaagaacagtgcaattccaggccagagccacagt
cagcaggccccaccaccatccatgcagcaacaaccacctagaagacaacaggggatgcag
tccagcagcacaactcctggcaatggcgccgtgggtgcaggcatgtggggaggaggtgta
caaactgtggataatggtactgcagcttggggtcaggcttcagatgcaacatcaggttgg
ggtgatccagatgaacctggtaaagcttctggctgggggaatccttcacccaaccctggt
aaacctggtgccaagtcgattgaaagctggattggaaaaggagactctatttcagcttcc
cgtcatcccagctgggatgaggaagaagatggtggtggtggagcctggaacagcacgggc
tcccagggaagcagctcttccttcaactctggaggctggggtcagacacatggggggaaa
agaggaaacatgaaggctggaggaggggacagttggatgaacccagtgtcacgccagttt
tcaaatatgggcattctggatgatccaggtgtcgacaaaaaaatggaaggagacaagaga
ggaataactgactataatggagaaatgcggaggggagggagaggtggaggtggttaccgc
atgcctagttccaaagatatgggccctgttgacatggggccctatggtgaaaagatgggt
ggccacggagtgtttgtcagtggcggtggagggatgtctcagccccgagggatgcaccag
cctggcatgcattcgatgaacccctcccaggggttacgtgcacaagtgcctcatcagttc
ctgtctgctcaggtgccgggtcctatgctgaagcagatgccctcacctggtggaagtgtg
ggtggtgtagttggaggagtaggaggtgttggtggtgttggaagtgtcggaggggttggt
ggaggcgtgttccctccccagatttccccacagcagctagcaatgctcagcaacatttac
ccccccatgcagcagttccatctggcttgtcagttcctgctacaacaacaacaacagcag
cagcagcagcaacagcagcaacagtttctgcagaaccagaggaagttccctcagcctcag
cctctcaggcagcagccagacccacagcagctggcgaggattatggctattctgcagcaa
cagagacagcatcagcagggtggagttggaggagcagcaccaggagggagttccaaactg
tccccctctcacctgggaggaggcctatccaaacaggccatggtagaccctgttccacat
cctggaattgggggaaccttatcagaccttcacaccaaaacaccagggatgtactctggg
cttactcctggaagtaacctgtcaggactggagctcgggcccatgatgggagggatgaag
gatctaggaggacagcagtcccgctttaaatggatgatggagggacactctccagctccc
tctccccccgactcaaccattcacaagaacggccctttacccagtgctgtaaaggttaga
ggagggtctccttactcccagtatgaaatgctgggcagtgatggtttggggattccccct
cagggctctacagacagctggcaccggacccctggtagtaaaatggggaacaaatctgcc
acatcaagctggcctccagaattccagcccggtgtgccctggaagggcatacagaacagt
ggagacccagagtctgatccttatatgacccctggtagtgtccttggctccccaggatcc
ccaagcctcaacgactctgaccaccagttactgcgagacaacatagggccaaatccttct
ctcaacacctcgctgccttcacctggtgcctggccctacagtgcctcagaaagccccctc
agcaatgcacacagcacaggaaagtactctgattacaagcccagctggcctccagagccc
attggacagaacaagttgtggaagaccagtcgcaacagctcccagctgccacgcccccct
cctggcctaaccaatcagaagcaagcctcaccctcgccatggggtactggtggccctcgg
ttggcccggagctggggagggggtgggattaatcaagagtcaagatttgggcaaggctca
gcttggagtgatggtgcggcctccagaggcagctgttggttgctgttaagcaacctgacc
cctcagattgatggctccacgctgaggaccatctgtatgcagcatggccccctgctgacc
ttccaccttggcctgacccagggcaccgctctgattcgttacagcacccggcaggaagca
gccaaggcccagggtgcactgcacatgtgtgtcctgggcaacaccacgatcctggcggag
tttgtgagcgaagaagaagttgctcgctatgttgcacattcccaggccggaggggcagag
ggagccagctcaggaggggcagcggccggtggggcacagggttcatccggaacaggcaca
actgtggtggccagcagtggaggaagttctccggggagcgagcgggcagctgtgggggca
acttcgggtggaaacggaaatggcagtggaggagagagtggagcagcggttctagctgga
gttaggtcctctggctctggctggcagagtcttgatggtacaggtagttcttcagagacc
tcctcagcccaaggacccgggctggggatattttcccagtggagcaccaacggggctggg
gagggaggaggtgttgggggagtagagtctgggaggtctgggctttggggaggcatgact
gcaggataccccagcagcagcctgtggggggcaccgcagatggaggaaaggcaccaaatg
gacagccctgctggattgttgcccggcgacctgctggggggaggaaccgattccatctga
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integrated database retrieval system
