Oreochromis aureus (blue tilapia): 116311916
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Entry
116311916 CDS
T07295
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03030
DNA replication
oau03410
Base excision repair
oau03420
Nucleotide excision repair
oau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116311916 (rfc3)
03410 Base excision repair
116311916 (rfc3)
03420 Nucleotide excision repair
116311916 (rfc3)
03430 Mismatch repair
116311916 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oau03032
]
116311916 (rfc3)
03036 Chromosome and associated proteins [BR:
oau03036
]
116311916 (rfc3)
03400 DNA repair and recombination proteins [BR:
oau03400
]
116311916 (rfc3)
DNA replication proteins [BR:
oau03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116311916 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
116311916 (rfc3)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116311916 (rfc3)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116311916 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
116311916 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
ABC_tran
DUF2247
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
116311916
NCBI-ProteinID:
XP_031585009
Ensembl:
ENSOABG00000022613
LinkDB
All DBs
Position
LG10:17489864..17493859
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPSSLGKLDFHKEQAAQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSTEEVCSVLTSVCKKEGLVLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SVDQDVPETDWEVYLRETANAIVSQQTPQRLLEVRARLYELLTHCIPPEIIMKCLVKELL
NNCDGQLKTEVAHIAAYYEHRLQLGNKAIYHLEAFTAKFMAIYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggacaaatatcgtccgtcgtccctcgggaaactggactttcataaa
gagcaggcggctcagctcaaaaacctggttcagtgtggtgacttcccacacttgttggtg
tacggtccatcgggtgcaggcaagaagactcgcatcatgtgtctgctgagggagctctac
ggtcctggggtggaaaagcttcgcattgagcaccagaccattgtggctccctcaaagaag
aaaattgagattaacaccatagccagcaactatcacttggaagtaaatccaagtgatgca
gggaaccaggaccgtgtggtgattcaagagctgatcaaaactgtggcacagtctcagcaa
atccagtcgagcacacagagagactttaaagtggtgttgctaacagaggtggacagactg
acgaaggatgcccagcacgctttgcgtcggacgatggaaaagtacatggccacctgcaga
ctcattctctgctccacctctacttccaaagtcatcgggccaattaggagccgttgtctg
gcgattagagttcctctgccgagcacagaagaggtttgtagtgttcttacatccgtctgt
aaaaaggagggtctcgtcctcccacctgagctggccaaacaaatcagcgaaaaatctggt
cgcaacctccgtaaagcgcttttgatgtgcgaggcctgccgagtgcagcagtatccattc
tcagtggaccaagacgtcccggagacagactgggaggtttatcttagagaaacggctaat
gccatcgtcagccagcagactcctcaaaggttgttggaggtccgagccagactgtatgag
ctcctgacccactgcatccctcctgagattatcatgaagtgtctcgtgaaagagttgctt
aataactgtgatgggcagctgaagacggaggtggctcacattgcagcctactatgagcac
agactacagctggggaacaaagccatctaccacctggaggcattcactgccaagttcatg
gccatctacaagaagttcatggaagatggtctggatgcgatgatgttttga
DBGET
integrated database retrieval system