KEGG   Oreochromis aureus (blue tilapia): 116311916
Entry
116311916         CDS       T07295                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03030  DNA replication
oau03410  Base excision repair
oau03420  Nucleotide excision repair
oau03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116311916 (rfc3)
   03410 Base excision repair
    116311916 (rfc3)
   03420 Nucleotide excision repair
    116311916 (rfc3)
   03430 Mismatch repair
    116311916 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oau03032]
    116311916 (rfc3)
   03036 Chromosome and associated proteins [BR:oau03036]
    116311916 (rfc3)
   03400 DNA repair and recombination proteins [BR:oau03400]
    116311916 (rfc3)
DNA replication proteins [BR:oau03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    116311916 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    116311916 (rfc3)
Chromosome and associated proteins [BR:oau03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    116311916 (rfc3)
DNA repair and recombination proteins [BR:oau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     116311916 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    116311916 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 AAA_11 ABC_tran DUF2247 ATPgrasp_ST
Other DBs
NCBI-GeneID: 116311916
NCBI-ProteinID: XP_031585009
Ensembl: ENSOABG00000022613
LinkDB
Position
LG10:17489864..17493859
AA seq 356 aa
MSLWVDKYRPSSLGKLDFHKEQAAQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSTEEVCSVLTSVCKKEGLVLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SVDQDVPETDWEVYLRETANAIVSQQTPQRLLEVRARLYELLTHCIPPEIIMKCLVKELL
NNCDGQLKTEVAHIAAYYEHRLQLGNKAIYHLEAFTAKFMAIYKKFMEDGLDAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtggacaaatatcgtccgtcgtccctcgggaaactggactttcataaa
gagcaggcggctcagctcaaaaacctggttcagtgtggtgacttcccacacttgttggtg
tacggtccatcgggtgcaggcaagaagactcgcatcatgtgtctgctgagggagctctac
ggtcctggggtggaaaagcttcgcattgagcaccagaccattgtggctccctcaaagaag
aaaattgagattaacaccatagccagcaactatcacttggaagtaaatccaagtgatgca
gggaaccaggaccgtgtggtgattcaagagctgatcaaaactgtggcacagtctcagcaa
atccagtcgagcacacagagagactttaaagtggtgttgctaacagaggtggacagactg
acgaaggatgcccagcacgctttgcgtcggacgatggaaaagtacatggccacctgcaga
ctcattctctgctccacctctacttccaaagtcatcgggccaattaggagccgttgtctg
gcgattagagttcctctgccgagcacagaagaggtttgtagtgttcttacatccgtctgt
aaaaaggagggtctcgtcctcccacctgagctggccaaacaaatcagcgaaaaatctggt
cgcaacctccgtaaagcgcttttgatgtgcgaggcctgccgagtgcagcagtatccattc
tcagtggaccaagacgtcccggagacagactgggaggtttatcttagagaaacggctaat
gccatcgtcagccagcagactcctcaaaggttgttggaggtccgagccagactgtatgag
ctcctgacccactgcatccctcctgagattatcatgaagtgtctcgtgaaagagttgctt
aataactgtgatgggcagctgaagacggaggtggctcacattgcagcctactatgagcac
agactacagctggggaacaaagccatctaccacctggaggcattcactgccaagttcatg
gccatctacaagaagttcatggaagatggtctggatgcgatgatgttttga

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