KEGG   Oreochromis aureus (blue tilapia): 116311928
Entry
116311928         CDS       T07295                                 
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116311928 (exosc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oau03019]
    116311928 (exosc8)
Messenger RNA biogenesis [BR:oau03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     116311928 (exosc8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 116311928
NCBI-ProteinID: XP_031585028
Ensembl: ENSOABG00000024340
LinkDB
Position
LG10:complement(17190481..17193110)
AA seq 277 aa
MAAGFKTAEPLEYHRSFLKENCRPDGRELTEFRTTTLNIGSISTADGSALVKLGNTTIIC
GIKAELANPTVEAPGKGYIVPNVDLPPLCSSRFRPGPPGEEAQAASQFIADVIESSEVIK
TEDLSIDRGKLCWVLYCDLMCLDYDGNILDACVIALLAALKNTRLPEVTINKETSAPEVN
LEKRRELQIHKHLVSASFCIFDDSILIADPTAEEETLSTAHLTVVTDEDDRLCSVHKPGG
TSLSGERLQECISRATTRQREIQKLIDKVAHSVKKAQ
NT seq 834 nt   +upstreamnt  +downstreamnt
atggcggctggcttcaagactgctgagcctctggagtaccaccggagctttctgaaagaa
aactgtcggcctgatggacgagagctgactgaattcagaaccacaacactgaacataggg
tcaatttctacagcagatggctcagccctggtgaagcttggaaacacaacaatcatatgt
ggaattaaagcggagctagcaaaccctacagtggaggcacctggtaaaggctacattgtg
cccaacgtggacctgccacccctatgttcctctcgctttcggccgggaccaccgggagag
gaggcccaggctgccagccagtttatcgctgatgtcattgaaagctctgaagtgataaaa
acagaggatctgtccatcgacagaggaaagctctgctgggtgctgtactgtgacctcatg
tgtctcgactatgatgggaacatattggatgcttgtgttatcgcactcttggctgctcta
aagaacacacgactcccagaagtcaccatcaacaaggagacctctgcaccagaggtgaat
ttagaaaagagacgggaacttcagattcacaaacatctagtcagcgcttctttttgcatc
tttgatgattccatactgattgcggaccccacagctgaggaggagactctgtcaacagca
cacctgacggtggtgactgatgaggatgaccggctctgctctgtgcacaaaccaggtggg
acatcactgtcaggagagaggctgcaggagtgtatcagccgagcaacaacacgacagaga
gagatccagaaactcattgacaaagttgcacacagtgtgaagaaggcacaataa

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