Oreochromis aureus (blue tilapia): 116311995
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Entry
116311995 CDS
T07295
Symbol
ranbp2
Name
(RefSeq) LOW QUALITY PROTEIN: E3 SUMO-protein ligase RanBP2
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03013
Nucleocytoplasmic transport
oau03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116311995 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116311995 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116311995 (ranbp2)
03110 Chaperones and folding catalysts [BR:
oau03110
]
116311995 (ranbp2)
04121 Ubiquitin system [BR:
oau04121
]
116311995 (ranbp2)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116311995 (ranbp2)
Chaperones and folding catalysts [BR:
oau03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
116311995 (ranbp2)
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
116311995 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Zn_ribbon_RanBP
Pro_isomerase
WH1
TPR_16
TPR_14
TPR_1
TPR_2
TPR_CcmH_CycH
TPR_8
TPR_7
ARM_TT21_C
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
116311995
NCBI-ProteinID:
XP_031585110
Ensembl:
ENSOABG00000025045
LinkDB
All DBs
Position
LG16:complement(11439532..11463106)
Genome browser
AA seq
3035 aa
AA seq
DB search
MRRSKADVDCYVSSVQSSSPSLKEKPVKGFLFAKLYFEAKEYDLAKRHVSDYLKVQERDP
KAHKFLGQLYEREGDINKAVGCYKRSVDLNPAQKDLVLKVAELLVSKQECDSRAEFWVEK
AAKLLPGNPAVFNLKERLLSRQGQQGWNRLFDLLQTELAARPADAHVNVKLVQLFRQDGR
LEEAVKHCLAAEKRAMLRNSLDWYTEVVRTLKEYLAQPSILNNEKMSRCIQRELLLAHCS
LLRITLSESSVQPSLDALREFDQAMEALSSIAGHSPDELLEVFVEMRGHLYLHAGTLLLK
LVQDRQQTWRAVRDLAALCYLLAYQVPRPKPKVTKRDQTAPQLLELLANDRQSQAGHMLF
NLSTDSSALIREVVEAIGNRSGQDSLFDLLRGPQASAGLSFIANDDIHSLTAMAPELSQL
AKWDTGSILLHSGQLQHLSWLGLQWNLLDQRPPLREWLQQLFPRLTLETSKLDTNAPESI
CLLDLEVFLYGVVFCSHCQLQEIAKINAGVNQSHQQQLFEPRCLPLPLLRLLTTDRQREW
WDALYSLIHKRAVLGVSGKLRMIVQHGLSTLRAGEKHGLQPALVIHWAQCLSQTGDGVNS
YYDQKEYIGRSVHYWKVALPLLEKIKNRRSIPEPLDPLFIHFPSKDIQISSVKGYEEEAR
IAYAVLLDIEGKTEEAISTLESINNMSSIWHLAQIYQRLSEEASNGVEETQDRCMMFLRK
FRAYLSKIYSANADDIEKLPVSMEEVVDLLNDVNQQLGENGEVMDEEDEKEEGGLRGPAH
SSPVHLGETSATISHIKFSTPSPNKSIVSPSKRLISPKTQPHWVEDQKSLLQMLCQQVEA
LKNEVHDLRHNSSGSTVSPHHKMYGETYGAEGLQEPFTPVQSYHGAPLTVSTTGPSVYYN
QSQAYNSQHLLRTAANVTPTKTPMYGVNRMPPQQHMYAYQQPTHTPPLQTAPACIYPPQE
QVFGAPLRFESPATSLLSPYGEDYYGQSVTQQASNPTLPEPGYFTKPPVVPVQQPKNIEG
KPMDFGKLSFSQQAPAEVPRVPSFGTGVTAQSTPSPAFKFNSNFKSNDGDFTFSASQNKH
SESLLGLLTSDIPSKTDTVPEKPQTQEQPTTQTGIFTFGNKNVTSFSFVDSAQSTATGGL
FGKVDQPFQFGDMSKPVFGMSKPTAEQERAVESDNDSTHAEEDEDGPHFEPIVPLPDKVD
VKTGEEEEEEIFCTRAKLYRFDTETKEWKERGIGNVKILKHSTKGKVRLLMRREQVLKIC
ANHYIMPDMLLKPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTVDEAALFKAKFEEAQK
TVLKSPDKTNQQERKEKTVKDSESIAAQFALKEGEWECSVCCVRNKPTDVRCVSCQSPNP
NASSKPDIQAAGEVKPSSFTFKFGTDSAKPSSSGSTFTGFGGFGSSVASSFTFGLSSSKP
ADTGSNTFGGFGAVLASKPGQWDCESCSIKNEANVDSCVSCKALKPSAKTAAAAQAAPAA
GAPAAQPILSSVDSAGVAAKFSKKPGQWDCDVCEVRNEASAGKCVSCGSPNPAAKPTEGA
SLASNLPAVSGPQADFPKKDGQWDCNACLVRNDASATECVSCKAPNENASLAARFGKKDG
EWDCDTCLVRNEASADKCVSCQTLNPSAKSTSSTSSSSSSSKFTFGTKSSSSQPAGTGFT
IPFVSGGTFQFGQSKDKSSPASFKFEAPRLDLVQSVRQASLFQCPLGLVASSLVFKTLQK
NPLQMIIRLNLAASSMLKSIADKHKEKETVSTPSVEQTEEEQNPLISGKTNAFSFADLAK
SAGGNFQFGTKDPEFKGFSGAGEQLFTSFQATPTKTEASNELEDDDMYKTEENDDIQFEP
VIQMPEKVDLVTGEEDEQVLYSQRVKLFRFDVGTSQWKERGVGVLKFLKNTTNGRLRVLM
RREQVLKVCANHWITTTMNLKPLAGSDKAWMWLANDFSDGDAKLEQLAAKFKSPELAHEF
KEKFEECQRLLLDIPLQTPHKLVDTGRTAHLIQKAEEMKSGLKDLKSFLTDEKTKIKDND
TQGDNATAGDISSLVIKPQGDTTGPTLEWDNYDLREDALDDTADSSVYASPLASSPLRKN
LFRFGESTGGFSFSFQPGISPSKSPAKLNQSRASVGTDDEQDVTQDEERDGQYFEPVVPL
PDLVETSTGEENEQVVFSHRAKLYRYDKDSKQWKERGIGDLKILQNYDNKQARLVMRRDQ
VLKICANHCISPIMKLEPMKGAEKAWVWSAMDFAEEGEGKLEQLAVRFKLQETANTFKQV
FEEAKDAQGKKELMTPVTSRVVAPQDSGTPGSAKTTPAVCGKAAIAVLEETTKECTELPT
DTGSSASASQSPVNPGKTVVSPPKFVFGTDTLQKIFGTPKSHSEPEQSTASGLKANDSGY
SARTSLQVPAFKIPEKGSPQAEGSSARSDEDSEVEIVYVREPTAEQAALARKLQLPITFF
CYKNEPGYISDDQTDDEDYESAVKALNGKLYPDPPERKAAACGDESDCQVVWEKKPTPEE
EKKAKSLQLPPTFFCGLSTTDSDPDQDKPEDFETEVRKVHEVLVAQLDKSNEASSSPAVT
PEMPASGPSSSRAEAADSTSTADKQTTATPSRSSPIDLSTKKSVELESNTETKPASLTAT
TSRDISTFGFNASGFSFAELAKNTDGFAFGSKDSNFSWANAGATVFGSAVTSQPKTNGDE
EGSDEEEAPKNVDIHFEPIVSLPEVETKSGEEDEEILFKERAKLYRWDRDIGQWKERGIG
DIKILFHPTKHFYRILMRREQVLRVCANHKISQAMELKPMNTSANALIWTATDYSDGEGV
IEQLAAKFKTPEIAESFKKTFCECQNRMGQIDGDASSLCSPQMSRIQEHSRDTNPQVFLK
LAADGQPLGTITVELFSHIVPKTAENFRALCTGEKGFGLQDSIFHRIIPDFMCQGGDITK
NNGTGGKSIYGNNFEDENFDVRHTGPGILSMANRGRDTNNSQFFITLKKAEHLDFKHVAF
GWVRDGMDVVQQMGELGSKAGTPTKKIIITDCGQL
NT seq
9108 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgaagtaaggctgacgtggactgttacgtttcctcagtacagagttcctctccc
tcactcaaagagaagccagtcaaagggtttttatttgctaaattgtactttgaagcaaag
gaatatgatcttgcaaaaaggcatgtgtcagactatcttaaggtccaggagagggatccc
aaagcacataagttccttggacagctctacgagagagagggagacatcaacaaagcagtt
ggatgttacaagcggtcggtggatttgaacccagcccagaaagacctggtgctgaaggtt
gcagagctgcttgtcagtaagcaggagtgtgacagcagggcagagttttgggtggagaaa
gctgcaaagttgctaccaggaaacccggcggttttcaaccttaaggagcgcctgttgagt
cgtcagggtcagcagggttggaaccggttgttcgacctccttcagaccgagctggcagcg
cggccggctgacgcccacgtgaacgtgaagttggttcagctgttccgtcaggatggccgg
ctggaagaggctgttaaacactgcctggctgctgagaaaagagccatgctgcgcaacagt
ctggactggtacactgaggtggtgcgcacactgaaggagtacctggctcagcccagcatc
ttgaacaatgagaagatgagtcgatgtattcagagagagctgttgttggcccactgcagc
ctgctgagaatcacactatctgaaagcagcgtgcagccaagtctagatgcacttagagag
tttgaccaagctatggaggcactgagcagcattgcaggccacagtccggacgagctcctt
gaggtgtttgtggagatgagagggcacctctacctgcatgcaggcacgctgctgcttaag
ctggttcaggatcgccaacaaacctggagggctgttcgtgacctggctgcactttgctac
ctactggcatatcaggtccccagaccaaagccaaaagtgaccaaaagagatcagacagcc
ccacagcttctggagctgctggcgaatgaccgacagagccaggccggccacatgttgttc
aatctgagcacagattcatctgccttgatcagagaggttgtggaggctattgggaaccgg
agtggtcaggactccctgtttgacctcctgcggggtccgcaggcctctgctggattgtct
tttatcgccaatgatgacattcattcccttactgctatggctccagagctctctcagctg
gccaaatgggacactggctccatcttgctccacagtggtcagttgcaacatctgagctgg
ttgggactccagtggaaccttctggaccaaagaccaccgctgcgggaatggctacagcag
ctctttcctcggcttacgctggaaacctctaaactagataccaatgcgccagagtcaatc
tgcctgctggacctagaggtgtttctatatggtgtggtgttctgtagccactgtcagctt
caggagatagcaaagatcaacgctggagtcaatcagtcacaccaacaacagctctttgag
cctcgttgcctccctcttcctctcctccgcctcttgaccactgacagacagagggagtgg
tgggatgccctctacagcctcattcacaagcgagcagtacttggtgtgtcaggaaagcta
cgaatgattgtgcagcatgggctaagcacattgagagctggagaaaaacatgggcttcaa
ccagcgctggtcatccactgggctcagtgtcttagccagacgggggatggggtgaactcc
tactatgaccagaaggagtacattggccgaagtgtccactactggaaagttgcccttcca
ctgctggagaagatcaaaaacagacgcagtataccagaacctcttgaccctctctttata
cactttccctccaaagatattcagatttcttctgtgaaaggttatgaagaggaagcaagg
atagcatatgcagttcttcttgacattgaagggaaaacagaggaggccatttctaccttg
gaaagcatcaataacatgtcttccatctggcatttagctcaaatctatcagcggctgtca
gaagaggctagcaatggtgttgaggagactcaagacaggtgcatgatgttcttgagaaag
ttcagggcatacctgtcaaagatctacagtgccaatgcagatgacattgaaaagctgcct
gtctctatggaggaagttgtggacctcctaaatgatgtgaaccagcagctgggggagaac
ggggaggtcatggatgaagaggatgagaaggaagaggggggcctaagaggaccagcccac
tccagtcctgttcatctcggcgaaactagtgcaaccatatcccatattaagttctccact
ccctctccaaacaaaagcattgtttctccttcaaaaagactgatttctcccaaaacacaa
cctcattgggtggaggaccagaagagtctccttcagatgttgtgtcagcaagtagaagcc
cttaagaatgaggttcatgatctaagacacaactcgtcaggctctacagtttctcctcac
cataaaatgtatggcgagacttacggggcggagggcctgcaggaaccatttaccccggtt
cagtcctatcatggagcccccctaacagtttccaccacaggcccctctgtgtactacaat
cagtcacaagcttacaactctcagcatctcttgcgcacagcagcaaatgtaacccccacc
aagaccccaatgtatggcgtaaaccgcatgccacctcagcagcatatgtatgcctaccag
cagcccacgcatacacctccactgcagacagccccagcctgcatctaccctcctcaagaa
caagtctttggtgcacctctgcggtttgaatcaccagccacaagtcttctttcaccctat
ggtgaagattattatggccagagtgttacccaacaagccagtaaccctaccttacctgaa
cctggctatttcaccaagccacctgtagtccctgtgcaacaaccaaagaacattgaggga
aagcccatggactttggaaagctctccttcagccagcaggcacccgctgaagtccccaga
gtgcctagttttggtacaggtgtaactgcccagtcaacaccttcacctgcttttaaattc
aactccaattttaaatccaatgatggtgattttacattctcagcttctcaaaataagcac
agtgaaagtttgcttggccttctcacatcagacattcccagtaaaacagacaccgttcca
gagaaaccacaaactcaggagcagcccaccacccaaacgggcatcttcacctttggaaac
aaaaatgttaccagcttttcatttgttgattctgcacagagcacagccactggaggcctg
tttgggaaggtggatcaaccatttcaatttggggacatgtccaagccagtgtttggaatg
tcaaagcctacagcagagcaggaacgggcagtggagagtgacaatgatagtactcatgct
gaggaggatgaagatgggcctcactttgaacctattgtccctcttcccgataaggtagat
gtgaaaacgggtgaggaagaagaggaagagattttctgcaccagggcaaagttgtatcga
tttgacacagagacaaaagagtggaaggaacggggcattggcaatgttaaaattttaaaa
cacagcactaaaggcaaggtccgcctcttaatgagaagggaacaggtccttaagatctgt
gcaaatcactacataatgcctgatatgttgctgaaaccaaatgccggctctgataaatct
tgggtatggaatgctattgattatgcagatgaggagcctaaacctgaacagctggccatc
cgtttcaaaactgtagacgaggcagcacttttcaaagccaagtttgaggaagcccagaag
actgtactcaaatcacctgacaagacaaatcaacaggaaaggaaagaaaaaaccgtgaaa
gattctgaatcgattgcagcccagtttgcactgaaagaaggagaatgggaatgctctgtg
tgctgtgtaagaaataaacccacagatgtacgttgtgtatcctgtcaaagccctaatccc
aacgcctcttcaaagccagatattcaggctgctggggaagttaaacctagttcttttaca
ttcaaatttggcactgattcagcaaaaccaagtagttctggctccacatttactggattt
ggtggttttggatcttctgtagcctcttcattcacattcggtctcagctcatcaaaacct
gcagacactggttccaatacatttggtggctttggagccgtacttgccagcaaaccaggg
cagtgggactgtgaatcatgctctataaaaaatgaggccaatgtagacagttgtgtttct
tgcaaagctcttaaaccctcggctaaaacagctgctgcagcacaagctgcaccagctgct
ggtgcacctgcagcacaacccattctgtccagtgttgactctgctggggttgctgccaag
tttagtaagaagcctggacagtgggattgtgatgtgtgtgaagtaagaaatgaagcctct
gctggtaaatgtgtatcctgtggaagtccaaaccctgctgctaagccaacagagggggct
tcattagcatcaaatcttccagcggtgtcgggaccacaagctgattttccaaagaaagat
gggcagtgggattgcaatgcctgtctggtcagaaatgatgcatcagctactgaatgtgtt
tcctgcaaagctccaaatgagaatgcatctttagcagctagatttggtaagaaggatgga
gaatgggactgcgacacttgtcttgtgagaaatgaagcctctgctgataaatgtgtgtcc
tgtcagaccctaaatcctagcgctaaaagcacaagcagcactagttcctcatcgtcctcc
tcaaaatttacctttggaacaaagagttcgtcaagtcagcctgctggaactggatttaca
ataccttttgtaagtgggggcacctttcagtttggtcagagcaaagataaaagctcacct
gcttctttcaaatttgaagctcccagactggatctagtacaatcagttcgtcaagcttct
ctttttcaatgcccattgggcctggtggcttcaagtttggtgttcaagaccctccaaaag
aatccccttcaaatgataatcagactcaatctggcagcctccagtatgctcaaaagtata
gctgacaagcacaaggagaaagaaactgtttctacaccctcagtagagcaaacggaggaa
gaacaaaatccattaatatctggaaaaacaaatgcgttcagttttgcagacttggctaaa
tctgctggaggaaactttcagtttggcacgaaagatccagaattcaaaggtttctctgga
gcaggtgagcagttgttcacatcattccaagcaacccccaccaagacagaagcctcaaat
gaactggaggatgatgatatgtataaaacagaggaaaatgatgatatccagtttgaacca
gtgatccagatgcctgagaaagtggacctggtaactggggaggaggatgaacaggttctt
tactctcagcgtgtcaaactgtttagatttgatgtgggtaccagtcaatggaaagagcgt
ggtgtgggagttctcaaattcctgaaaaacactacaaatggtcggctaagggtgctgatg
agaagggaacaagttctcaaggtttgtgccaaccactggatcaccaccaccatgaacctt
aaacccctggcaggctcagacaaagcctggatgtggttggccaatgacttctctgatgga
gatgctaaactcgaacagttagctgccaagtttaaaagccctgagcttgctcatgagttt
aaggaaaagtttgaagagtgtcagagacttctcttggacatccctttacaaaccccccac
aagctggttgacacaggtagaacagcacacctcattcagaaggcagaggaaatgaagtct
ggtttgaaagacctgaaatcatttttgactgatgagaaaacaaagataaaagacaatgac
acacagggagacaatgcaacagctggtgacatttcaagccttgtaatcaagccccaaggt
gacaccaccggccctaccttggagtgggacaactacgacctcagagaagacgctttagat
gacacggctgactcgtccgtgtatgcctcccctcttgccagcagccccctgagaaagaac
ctattccgcttcggggaatctactggtgggttcagctttagcttccaacctggcatcagc
ccctcaaagtctcctgctaagctcaaccagagcagagcttcagtgggtactgatgacgag
caggatgtcacccaggatgaagagcgggacggccagtactttgaacctgtggtccccttg
ccagatttggtggagacttctacaggagaggaaaatgagcaggtggtcttcagtcacaga
gccaaactatatcgctatgataaagactcaaaacagtggaaggagagaggaattggagac
ctcaagatcttgcagaattatgacaacaaacaagcgaggttggtaatgagaagagatcag
gtgctgaagatctgtgccaaccactgcattagtccaatcatgaagctggaacctatgaag
ggtgcagagaaggcctgggtctggagtgctatggactttgctgaggaaggagagggcaag
cttgagcagctggctgtgagattcaagctgcaagaaactgcaaatacattcaaacaagtc
tttgaggaagccaaggatgctcagggaaaaaaagaactcatgactccagtgacatctaga
gtggttgcaccacaagacagtggaacaccaggatctgcaaagaccactccagctgtatgt
ggcaaagcagccattgccgttcttgaagagacgactaaggaatgtactgagcttcctaca
gacactggatcaagtgcatctgcgtcacagagtcctgtcaatcccggaaagactgtggtg
tctcccccaaagtttgtttttggcactgataccctccagaagatttttggcactcctaaa
tctcattctgaacctgagcaatctacagcatctggtttgaaagccaacgactctggttat
tctgccaggacttcacttcaagttcctgcattcaaaatcccagagaaaggatcccctcag
gcagagggaagcagtgctaggtctgatgaggactcggaggtggagattgtgtacgtcagg
gaacccacagctgagcaggcagctttagctaggaagctccagctgcccatcaccttcttc
tgctacaagaatgaaccaggctacatcagtgatgaccaaactgacgatgaagactacgaa
tcagcagtgaaggccttgaatggaaagctctaccctgatcctcctgagagaaaggctgca
gcatgtggtgatgagtcagactgtcaggtggtgtgggagaagaagccaacaccagaggag
gagaaaaaagccaaaagcctccagcttccacccaccttcttctgtggcctgagcaccacg
gacagcgacccggaccaggataagcctgaggactttgagacagaagtccgcaaagtacat
gaagtcctggttgctcagttagacaaatctaacgaagcctccagcagtcctgctgtgacc
cctgaaatgccagcatcaggaccatcatccagcagagcagaggctgctgacagcacatct
acagcagacaaacagaccacagcaactcctagcaggagctctcccattgacctctcaact
aagaagagtgtcgagctggagtccaacactgagactaaacctgcatctttgactgctaca
acaagtcgagacatctccacctttggctttaatgcatctggcttttcttttgctgagttg
gccaaaaatacagatggatttgcatttggatcaaaagattctaatttctcatgggcaaat
gctggagcaacagtgtttggatctgcagtgacctctcagcctaaaaccaatggtgatgag
gagggaagtgatgaagaagaagctcctaaaaatgtggacattcactttgagcccatagta
tctctgcctgaggtggagacaaagtctggagaggaggacgaggagatcctgttcaaggag
cgcgccaaactgtatcgatgggaccgggatatcggccagtggaaggagcgcggcatcggt
gacatcaagatcctcttccacccaaccaaacatttctaccgaatcctgatgagaagagaa
caggtgctgcgggtttgcgccaaccacaagatctcgcaggcgatggagctcaaacccatg
aacacctcagcgaacgcactgatctggactgccactgattactcagatggcgaaggtgtg
attgagcagctggcggccaagttcaaaacccctgaaatagccgaatccttcaaaaagacc
ttctgcgagtgtcagaaccggatgggccaaattgatggtgatgcctcgtctctgtgctcg
ccacagatgtccagaattcaggagcactccagagacactaacccacaggtgttcctcaag
ctggcagctgatggccaacctctgggcacaatcactgtagagctgttctcacatattgta
cccaaaactgcagagaacttcagagctctctgcactggtgagaaaggctttgggctgcag
gactccatcttccacaggatcataccagatttcatgtgtcagggtggtgacatcaccaag
aataacggcacaggaggcaagtccatttacggcaacaattttgaggatgagaactttgat
gtccggcacacaggcccgggcatcctgtcgatggcaaatcgcgggcgcgacaccaacaac
tcgcagttcttcataaccctgaagaaagccgaacacctggacttcaaacatgtggctttt
ggctgggttcgggatggcatggatgtggtgcagcagatgggagagctgggctcaaaggca
ggcactcccacaaagaagatcatcatcacagactgcggacagctgtag
DBGET
integrated database retrieval system
