KEGG   Oreochromis aureus (blue tilapia): 116312272
Entry
116312272         CDS       T07295                                 
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    116312272
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oau01009]
    116312272
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oau04515]
    116312272
Protein phosphatases and associated proteins [BR:oau01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116312272
Cell adhesion molecules [BR:oau04515]
 Cadherins
  Protocadherins
   116312272
SSDB
Motif
Pfam: Cadherin Cadherin_CELSR2_9th Cadherin_2 Adeno_E3_CR2
Other DBs
NCBI-GeneID: 116312272
NCBI-ProteinID: XP_031585511
LinkDB
Position
LG1:16891129..16895271
AA seq 889 aa
MFNSRHPRLSKRGRLWGLCILLLYTNPLSCLANFSQAKELIYKIKEGLPRGTFIGAIGVD
LNLDFSVDPPFIFSLTQKKVSEQYVNLNNTTGELYTSATEIDRETLCADNLEGQGCVLSL
DVFVLPQQYFQLVKVKILIEDVNDNRPKFPTDEITMSVPENTPINARYAVEQSAVDPDLG
PHGVQTYWLVNDFGMFTLDVEENEGGELTPFLIVTEALDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFKESQINVTLHGNTTKGVHLARLHAFDPDLGANAQISYAYS
ERVPRDTRSLFHLDKITGVIKLGGKIDTGTATFYKLTVLATGPGCIPAVATVTVHIIKVV
TGPPTVIPRYIAPEKDGVVTIKESEPAFSPIAFFTVKNIDKNQRVDCYLEGPGPFRLSPY
QLFKNEYLLETTEPLDFERTQEYDLILVANSTRGIVIKTFLKVQVLDENDNAPVFQQSLV
EISVEENNPPNTFLTQLQASDQDSESRGEVLYLLGGDAPGIFVVDRVTGILTVATSLDRE
EKETYRLIVRAVDQGTPRREAIATVVVTVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVTDADAGENGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAVDGGEP
ALSSVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTVPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFF
VNETVSNESYIQSLLTREADIEVEERPWYIGQMAEGPERYEPFPCQPVLIALSVTCLGLF
FLVVTLTSYICCRRFKKNRMKRSEVEIPLKIQNDSMQVVNRKLRQISNI
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgttcaacagcagacatcctagactcagcaaaagaggaagactatggggattgtgcatc
cttttgctttacaccaaccccctttcctgtttggcaaatttcagtcaagcaaaagagctc
atctataagataaaggagggattaccaagggggacttttataggggctattggagtagat
ttaaatttggatttctctgttgaccccccctttatatttagtctcactcaaaagaaggtc
agtgaacagtatgtgaacctaaataataccaccggggagctttacacatctgctacagag
attgacagggagactctctgtgctgataacttagaggggcagggatgtgtcctctcactg
gatgtgtttgtgctgcctcaacaatactttcagcttgtcaaagtaaagattttaattgag
gatgttaatgacaacaggccaaagtttcccacggatgagatcactatgtctgtccctgaa
aacacaccaatcaatgctcgctatgcagtagagcaatcggcagttgacccagacctgggt
cctcatggagtgcaaacctactggctggttaatgactttggaatgttcacattggatgtt
gaggagaatgaaggaggtgagctgacgcctttcctcatagtgacagaagctttggaccga
gagactcaggcggaatacattaccgatataattgcagaggatggggggacccctcctcta
cttggcgctgcgactttgaaaattgtcatcacggatgtgaatgataactgtccccaattc
aaagagtcacaaattaatgtcactctgcatgggaataccaccaaaggggtacatttggca
cgtctgcatgcttttgaccctgaccttggtgctaatgctcagatcagctatgcttacagt
gaacgcgtgccaagggacaccaggagcttgttccatttggacaaaattacaggagtgatc
aagctcggagggaaaatagacactggcacagccacattttacaaactcactgttctggct
actggacctggttgtattcctgctgtagccactgttactgtccatatcatcaaagttgtc
actggaccccctactgtcataccccggtacattgcgccagaaaaagatggggtggtaaca
ataaaggaatctgaaccagctttttctccaattgctttttttactgttaaaaacattgat
aagaaccaaagggtggactgttatttagaaggacctggtcccttcaggctgagcccctat
cagctgttcaagaatgaatacctgttggagacaacagagcccttggactttgagaggaca
caggagtatgatcttattttggttgctaatagcacccgtgggatagttatcaagaccttt
cttaaagtgcaagttttggatgagaatgacaatgcccctgtgtttcagcagtctttggtg
gagatatcagttgaagaaaacaatccaccaaacacttttctcactcagctccaagcgtca
gaccaggacagcgaaagcagaggggaagttctttacctcctcggaggcgatgcccctgga
atttttgttgtggatcgagttacaggtatcctgactgtggccacatcgctggaccgtgag
gagaaagagacataccggttaatcgtgagagcggtggaccaggggacacccaggagggag
gcaattgcaacagtggtggtgaccgtgcaagatcgcaatgacaacagtccccgattcatc
aacaaggatttcactttctttgtgccagagaacttcccaggttacggtgagatcggtgtc
ctctctgtgactgatgctgatgctggggaaaatggctgggtggccctctccatcctgaat
ggcagtgacatttttatgattgacacaggccgaggggcactgagggcaaagacatcactg
gaccgggagcagcaggggacctaccagctatggattgaggctgttgatggtggggagcct
gctctctcctctgtcacaatggttaccgtgctgctgctggatgtaaatgacaacccacca
atcgtcctctttcctcagtcgaatcagtcttacatgctagtgctgcccaacactgtacca
ggaacgtcaatcacagaggtgtacgctgtggataaagatacagggatgaatgctgtgatc
gcctacagtatcattaaaaggaaaggcggtgagcccgggtcttttgccattgacccagaa
acaggaaatatcacattaaagagggagctcagcaatcgtggcctatacagccttctggtg
aaggtcagtgatcatggtcaacctgaaccgctgtactcaacagtcatggttaacttcttt
gtcaatgaaacagtgagtaatgaaagttacattcaaagtctgctgaccagagaggctgac
atagaggtagaggagaggccctggtacattggccagatggcagaggggcctgagaggtat
gagccgttcccgtgtcagcctgttctcattgctctttcagtgacgtgtctggggctgttc
ttcttggttgtcacgctgacatcttacatatgctgtaggaggtttaaaaagaacaggatg
aaaagatcagaagtggaaatacctttaaaaattcaaaatgactccatgcaggttgtgaac
agaaagctcagacagatctcaaacatctga

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