Oreochromis aureus (blue tilapia): 116312340
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Entry
116312340 CDS
T07295
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03013
Nucleocytoplasmic transport
oau03015
mRNA surveillance pathway
oau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116312340 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
116312340 (acin1b)
03015 mRNA surveillance pathway
116312340 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116312340 (acin1b)
03041 Spliceosome [BR:
oau03041
]
116312340 (acin1b)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116312340 (acin1b)
Spliceosome [BR:
oau03041
]
Complex C
Other components
EJC/TREX
116312340 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
116312340
NCBI-ProteinID:
XP_031585599
Ensembl:
ENSOABG00000000401
LinkDB
All DBs
Position
LG3
Genome browser
AA seq
1183 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLIKRLKGALMLENLQKTSSSHS
GLQPNSQIGEEMCQNSFIKQYLAKQQELLRQRLEREAQQGQDADESPAVPEEDEDHSEDN
DSSSYASDKPHQVLARPEERGAGGSVTGHGTTLHHQEAHDAPGARMQRATFHQGHKEPPA
PSPPRAVASLSVRVLGQPDCPPAVPPAQEKEGTAPSEPGSAHSVLHLSRSAGGSASSHVH
EDSDEGDDGDDESDDDEDWGPGPGGARKGSRGPAPSQQMPPSVPSSAGRSKRKLQPPQHI
PPPQVHHTPMQLRHPTPPPSPPPNLFPLPDTPKQSPPDPDDREEAGRGQRVASFPPSKVQ
RQDSDSSSRSSSPEPRVKRGTGPLSLLVHKMESEGAGMSGETAHSTAESSSESPQPGRET
KMQQEYRKMEEERQLKEREDKERQQEQERERRKEEEQEREKKRLEEEKEQERKRMEEERK
QREKEREKEKKQQEEEEKRREEKRLKEEQEKRQKTADEDKELVTKVQDSGSSSDSDSKSD
SLSRSSQSSSSQDKTQPARKLKKVDQEADDEKKADPSKAAETRHLSKREVSEPSAAAVTE
VEPDSESSMDQQPASGAEPENSEGRHEESTTPKAFAARKISLTSSKTSPATTDGGAGETE
TGTAAGRKRRWGSSTAVTAKKPSISITTDSLKSLIPDIKVSQEAVVELHPEELQLSGDEE
NPDASRSDPDKGLKIRRTVTQVVPGSSQENGQTKEEEEEEEVEKMETEKPRRTSRDNRKS
SLSEDAPETQTSVSLDGEAKKGEITPSDSLVRRSISQQKSGVSVTIDDPVRTARQPSPPR
GKVSNIIHVTNLVRPFTLGQLKELLNRTGSMVEEGFWIDKIKSHCYVTYATTDEAVATRA
ALHGVKWPTSNPKVLSVDFCEQTELDFHKGVLKPDKEEDPVPQPAAPPTRLPPLMPERDR
ERDRDRDRERERERERDRGVRDLWAEREREMQRRERARGEREWDRDKVREFARPGEDGRR
SRSRDRDRKRRERAKSKERKTDKKEKADEPPAKLLDDLFLKTKTAPCIYWLPLTEEQVAQ
RLLDRTERQKERERRHKELQEEEKKREEEKERLKGREKDGSVATSGGAAGRGADGDRERG
RDRDRDREGDKKRDGSHRPRRPSPGTASGRRSRSRSNPRDRRR
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctcttcagtcgctccgagttgcggat
ttgaaagcggctctggagcaaagaaacctcccaaaaagcggacaaaagaacacccttatc
aagcgactcaaaggggctctgatgctggagaacctacagaagacatcgtcctctcacagt
gggctgcagcccaactctcagataggagaggagatgtgccagaacagctttataaagcag
tacctggccaagcagcaagagctccttcggcagagactggagagagaggcccagcagggg
caagacgctgatgagagccctgctgtacccgaggaggatgaagaccactcggaggacaat
gacagctcctcctatgcctctgacaagccacatcaggttctggccaggcctgaggagaga
ggagcaggaggctcagtgacaggtcatggcaccacccttcatcaccaggaggctcatgac
gctccaggagctaggatgcagcgagccacctttcaccaaggacacaaggagccaccagca
ccctctcctccccgtgcagtcgcctccctgtctgtgcgcgttctgggacagcccgactgt
cccccagcagtacccccagctcaggagaaggagggcaccgcaccgagtgagccaggatcg
gctcattctgtgctccacctgagccgatctgctgggggttcagcatcaagccatgtccat
gaggacagcgatgaaggtgatgatggtgatgatgagagtgatgatgatgaggactggggg
cctggtcccggtggggcccgaaagggaagcaggggacctgccccatcgcagcagatgcca
cccagtgtcccatcatcagctggaagatccaaacgcaaacttcaacctccgcagcacatc
ccacctccacaggtacaccacacccccatgcagctgcgccaccccacacctcctccctct
ccacctcctaatctgttcccccttcctgacactcccaagcagagcccgccagacccagat
gaccgtgaagaagctggacgcggccaaagggtggcgtcattcccaccttccaaggtgcag
aggcaagactctgactcaagttctcgttccagcagtcccgaaccacgcgtgaaacgcggg
acagggcccctttctctgcttgtacacaagatggagtcagagggggctggtatgtcagga
gagactgcacactccactgctgagtcttccagtgaatccccacagccaggacgggagaca
aagatgcaacaagagtacaggaagatggaggaagagaggcagctgaaggagagggaggac
aaggagagacagcaggagcaggagagagaaagaaggaaggaagaagaacaggaaagagaa
aagaaacgcttagaagaagagaaggaacaggagaggaaacgaatggaggaggagaggaaa
cagcgtgaaaaggaacgagaaaaagagaagaaacaacaggaggaggaggagaagagaaga
gaggagaaacggctaaaggaggagcaggaaaagagacagaagacggcagatgaagacaag
gagctggtgactaaggtccaagattcaggttcttcatcagattctgactccaaatcagac
tcgttgtcacgatcatcacaatcgtcctcctctcaggataaaacacaacctgccaggaag
ctgaagaaggtggaccaagaagctgatgatgagaaaaaagctgacccgagtaaagcggca
gagacacgacacctttccaaaagggaggtgtcggagcccagtgcagccgccgtgacagag
gtggaaccagattcggagagctccatggaccagcagccagcctccggggctgagcctgag
aacagtgagggccgccatgaggagagcaccacccctaaggcttttgctgctcgcaagata
tccctgaccagcagtaagacttctcccgccaccacagacggaggagcaggagagactgag
acgggaaccgcagcggggagaaagaggcgatggggctccagcacggccgtcactgctaag
aagccctccatcagcattacaacggactccctgaagtctttgatcccagacatcaaagtg
agccaggaggcagtcgtggagcttcacccagaggagctgcagttgtctggtgatgaggag
aacccggatgccagcaggagcgacccggacaaaggcctcaagatccggcgcaccgtcaca
caggttgtcccaggtagcagccaggaaaatggacagacaaaggaagaagaagaagaagaa
gaggtggagaaaatggagacagagaaaccacgccggacttccagagacaacaggaagagc
agtctttccgaggatgccccagaaacacagacgtctgtcagcctcgacggggaggcgaag
aaaggtgaaattacccccagcgacagcctggtgcgtcgctccataagtcagcagaagtcc
ggtgtgtccgtcacgatcgacgatcccgtccgcacagccaggcagccctcaccacctcgt
ggaaaagtgtcaaacatcatccatgtgacaaacctggtgcgacctttcaccctgggccag
ctgaaggagctgctgaaccgtacagggagcatggtggaagagggcttttggatcgacaag
ataaagtctcactgctatgtcacatacgctacaacagacgaggctgtcgccaccagagct
gccctccacggagtcaagtggcctacgagcaatcccaaggtcctcagcgtggacttctgt
gagcagactgagctggactttcacaaaggtgtcctgaagccagacaaagaggaggatcct
gttccccagcctgctgccccaccgacccggctgccccctctgatgcctgagcgagacaga
gaacgagacagggacagagatagggaacgtgagcgcgaacgcgagcgggacagaggtgta
cgggatctgtgggcagagcgagaaagggagatgcagcgcagagaaagggcgcgaggcgag
cgggaatgggaccgggataaggtgcgggaatttgcacggccgggagaggacggacgacga
tctagatccagagacagagacaggaagaggagagagagggccaagagcaaggagaggaag
actgataagaaggagaaggcagatgaacctccagccaaactgttagacgacttgttcctc
aagaccaaaacagctccgtgtatatactggcttcccctcaccgaggagcaggtggcgcag
aggcttttggatcgcacagagcgacaaaaggagcgcgagcgaaggcataaggaactgcaa
gaggaggagaagaaacgcgaggaggagaaggaaaggctgaagggccgggagaaggatggc
agcgtggcaacaagcggcggagcagccgggcgaggcgctgacggagacagagagcggggc
cgagaccgagatcgagaccgtgagggggacaagaagagggacggcagccaccgaccccga
cgaccttcgccgggcactgctagtggacgccggtctcgtagtcggagcaacccaagggac
aggcgccgctga
DBGET
integrated database retrieval system
