KEGG   Oreochromis aureus (blue tilapia): 116312474
Entry
116312474         CDS       T07295                                 
Symbol
cavin1a
Name
(RefSeq) caveolae-associated protein 1
  KO
K19387  polymerase I and transcript release factor
Organism
oau  Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:oau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oau03021]
    116312474 (cavin1a)
Transcription machinery [BR:oau03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    Transcription termination factors
     116312474 (cavin1a)
SSDB
Motif
Pfam: PTRF_SDPR Snapin_Pallidin DUF1664 DUF1647
Other DBs
NCBI-GeneID: 116312474
NCBI-ProteinID: XP_031585756
Ensembl: ENSOABG00000006849
LinkDB
Position
LG4:complement(9376456..9394256)
AA seq 421 aa
MADTGVKKEHGALAEVSYDDEEVALVGAATEPAVDDDDPADVTDPVLATGPGGKSEAQMN
GVMILSLLDKIIGVVDQIQQTQNGLEARQEAMEKSVSTIQGELSKLSKNHIDTANTVNKM
LEKVRKVSVNVKTVRSNLEKQAGQIKKLESNESELLKRRNFKVLIYQDQVKPPKASKSKT
AEAVESKTAEGLEQIPEEGQEGLQDNLNSDEEVVIEEELIETRTKRLQRTTKEQVDNIKK
AFSKEKIEKTKLKTKENLEKTKQRTRENLEKTRQRTRDNLEKTKHSLEKKIGKLGTRMTP
NQERRAKIKSSKEKMKKSLTPDHKMYARSKTSVYRVPPFTFHVKKIREGEEEVVLNTEMV
EVSEAEVQPEGEENGMGVHVEVEEGELVSVDSPEMDTLLEVTEDSDLVRVDTDHLKKAQS
E
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgatacaggtgtcaagaaggagcatggagcccttgcagaagtgtcttacgatgat
gaagaggtcgctctggtgggtgccgccacagagccggcagtagatgacgatgatccagct
gacgtgaccgatccggtgctggccactggccctggagggaagagtgaagcgcagatgaat
ggggtcatgattctgtctctgctcgacaagattatcggggtggtagaccagatccagcag
acccagaatgggctggaggcccggcaagaagccatggagaagtcagtgtcaaccatccaa
ggggagctgtctaagttgtccaagaatcacatcgacaccgccaacactgtcaacaaaatg
ctggagaaggtacgcaaggtcagcgtcaacgtcaagacagtacgcagcaatctcgagaag
caggcgggccagatcaagaagctggagagcaacgagtctgagctgctcaagagacgcaac
ttcaaagtcctcatctatcaggaccaagtgaagccaccaaaggcatccaaatccaagaca
gcagaggcggtagaaagtaaaacagcggagggtcttgagcaaatccctgaagagggacag
gagggactccaagacaatcttaattcagatgaagaggtggtgattgaagaggagctcata
gagactcgtacaaagcgcctccaacgcaccacaaaagagcaagtcgataacataaagaaa
gccttctccaaagagaaaattgagaagaccaaactaaaaaccaaggaaaacttggagaag
accaagcagagaacccgtgaaaacttggagaagacaagacagagaacccgtgacaacctg
gagaaaaccaagcacagtcttgagaagaagatcggcaagctcgggacccgcatgaccccc
aaccaggagcgcagggcaaagataaagagttccaaagagaagatgaagaagtcactcacc
cctgaccacaagatgtatgctcgttccaagacctccgtgtaccgcgttcccccttttacc
ttccatgttaagaagatccgggaaggggaggaggaggtggtgctgaacacggagatggtg
gaagtgagcgaggctgaggttcagccagagggagaggagaacgggatgggtgtgcacgtg
gaggtggaggaaggggagcttgtcagtgtagacagccctgaaatggatactctgttggag
gtgactgaagactctgacctggtcagggtggatacagaccacctaaagaaagcccaaagt
gaatag

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