Oreochromis aureus (blue tilapia): 116312719
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Entry
116312719 CDS
T07295
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116312719 (taf1a)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
116312719 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
Motif
Other DBs
NCBI-GeneID:
116312719
NCBI-ProteinID:
XP_031586038
Ensembl:
ENSOABG00000016774
LinkDB
All DBs
Position
LG15:complement(14509550..14518523)
Genome browser
AA seq
437 aa
AA seq
DB search
MDDFNRELEPHIDLENDSDSSEDNSSKGGKKSKFPLVKPIYGDQTQQNGFRRTTSMCRER
IREAMLHHRWEEAAEYMVYYPQILEDRNLFTAQPSKEFIWRTATEIFHHHLNSTMEDYNT
IYERMKHSGFRHYLMISLEHSFHLLLHQQIEDAKRHLASAESWRHGKETAAQIQNIKLIQ
AYRGLLDYIIWCVKKSTRSSSDYYESDSSQTMQNYFRQASVNLEEILKNPGVWDSFILRY
VEMLEFYEHHKEALQVLNDYAYDSNFPPNPNAHVYLYQYLKRQGASEKRLMKVLKVLHAL
VPSHELMLEYSSLLLQSEKQSDTTKALGVVLEMLDFNCWGSNLEVWMRLKAVIQKLQNQV
DWENIVGEKMAERKDWWFALHFTSFHATEDSKENPELFEVKASLTKILCPDRPLKYSLNG
SQVKGKAETKKRKGRRY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttcaacagagagctggagcctcacattgacttagagaatgactctgactcc
tcagaggacaactcttcaaaaggagggaagaaatcaaagttccctttagttaaacccata
tatggagatcagactcaacagaatgggtttcgccggaccaccagcatgtgtcgggagcgc
atcagagaagccatgctgcaccacagatgggaggaggcagcagaatatatggtgtactac
ccccaaattttagaagacagaaatcttttcacagcacaaccatctaaggagtttatttgg
agaactgccactgagatctttcaccatcatctcaactcaacaatggaagattacaacacc
atctatgagcgaatgaagcattcgggatttagacattaccttatgatttctctggaacat
tccttccacctcctgctccaccagcagattgaagatgcaaagcggcatcttgctagtgct
gagagttggaggcacgggaaagagacagcagctcagattcagaatattaaactgatccag
gcctacaggggcctgctggattatatcatctggtgtgtcaaaaagtcgacacgctccagc
agcgattattatgaatctgattccagtcaaaccatgcaaaactacttcagacaagcctca
gtgaatcttgaggagattttgaaaaatccaggcgtctgggattctttcatactgagatat
gttgagatgctcgagttttatgagcatcacaaggaggctctgcaagtcctgaatgactat
gcgtatgacagcaatttcccacccaatcccaacgcgcatgtctacctctaccagtactta
aagcgacaaggtgcttcggagaagagactgatgaaagtgttgaaggtcctccatgcattg
gtccccagccatgagttgatgctggagtatagctctctcctgcttcagtcagagaaacaa
agtgacaccacgaaagctttaggagttgtcctggaaatgctggacttcaattgctggggg
agcaacctggaagtgtggatgcgtttaaaggcagtgatccaaaagcttcaaaatcaagta
gactgggagaacattgtcggtgaaaagatggctgaaagaaaagactggtggtttgcgctt
cacttcacgagcttccatgccacggaagactcaaaggagaaccccgagctttttgaagtg
aaagcttcactgacaaaaatcctttgcccagaccgaccactgaagtacagcctgaatggc
tcacaggtgaagggcaaagctgagacaaagaaaagaaaaggaagaagatattaa
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